Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund22508 Selenicereus undatus HOM05D009081 ORTHO05D011211 3.2e-74 281.6 131 100.0
Hund08597 Selenicereus undatus HOM05D009081 ORTHO05D000285 4.2e-34 148.3 74 90.5
Hund22593 Selenicereus undatus HOM05D009081 ORTHO05D011211 3.5e-33 145.2 74 87.8
Hund08587 Selenicereus undatus HOM05D009081 ORTHO05D011211 6.0e-33 144.4 74 87.8
Hund13350 Selenicereus undatus HOM05D009081 ORTHO05D000285 6.0e-33 144.4 74 87.8
Hund25589 Selenicereus undatus HOM05D009081 ORTHO05D011211 2.3e-32 142.5 74 86.5
Hund23903 Selenicereus undatus HOM05D009081 ORTHO05D011211 9.6e-31 137.1 74 83.8
Hund23904 Selenicereus undatus HOM05D009081 ORTHO05D011211 9.6e-31 137.1 74 83.8
Hund15113 Selenicereus undatus HOM05D009081 ORTHO05D000285 1.8e-16 89.7 66 57.6
Medtr7g105890 Medicago truncatula HOM05D009081 ORTHO05D011211 6.7e-16 87.8 74 51.4
Medtr0693s0050 Medicago truncatula HOM05D000876 ORTHO05D000285 8.7e-16 87.4 74 51.4
Medtr4g128327 Medicago truncatula HOM05D000876 ORTHO05D000285 8.7e-16 87.4 74 51.4
Medtr4g128540 Medicago truncatula HOM05D009081 ORTHO05D011211 8.7e-16 87.4 74 51.4
TPR.G31033 Trifolium pratense HOM05D000034 ORTHO05D000037 3.3e-15 85.5 74 48.6
Hund01895 Selenicereus undatus HOM05D009081 ORTHO05D011211 2.4e-13 79.3 39 87.2
Hund08582 Selenicereus undatus HOM05D009081 ORTHO05D011211 2.4e-13 79.3 39 87.2
Hund08746 Selenicereus undatus HOM05D009081 ORTHO05D011211 2.4e-13 79.3 39 87.2
Hund24601 Selenicereus undatus HOM05D009081 ORTHO05D011211 1.5e-12 76.6 39 82.1
Hund12276 Selenicereus undatus HOM05D009081 ORTHO05D011211 4.5e-12 75.1 39 82.1
Hund11051 Selenicereus undatus HOM05D009081 ORTHO05D011211 3.8e-11 72.0 39 76.9
EL10Ac4g07867 Beta vulgaris HOM05D000876 ORTHO05D000285 2.5e-10 69.3 44 63.6
CiPaw.04G143900 Carya illinoinensis HOM05D000876 ORTHO05D000285 4.2e-10 68.6 70 38.6
CiPaw.15G017800 Carya illinoinensis HOM05D000876 ORTHO05D000285 7.2e-10 67.8 70 38.6
AUR62039525 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.2e-09 67.0 39 69.2
Medtr1g073440 Medicago truncatula HOM05D009922 ORTHO05D000285 3.5e-09 65.5 67 41.8
AUR62042520 Chenopodium quinoa HOM05D003046 ORTHO05D003428 4.6e-09 65.1 39 66.7
MD12G1140100 Malus domestica HOM05D002354 ORTHO05D002469 7.9e-09 64.3 75 37.3
CiPaw.10G065300 Carya illinoinensis HOM05D000876 ORTHO05D000285 1.0e-08 63.9 70 35.7
arahy.Tifrunner.gnm1.ann1.X5RLQI Arachis hypogaea HOM05D000034 ORTHO05D000285 1.3e-08 63.5 68 36.8
CiPaw.10G139000 Carya illinoinensis HOM05D000876 ORTHO05D000285 1.3e-08 63.5 70 34.3
FAN02G2262 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.3e-08 63.5 51 45.1
Glyma.01G052000 Glycine max HOM05D000876 ORTHO05D000285 1.3e-08 63.5 66 40.9
Medtr4g061370 Medicago truncatula HOM05D000876 ORTHO05D000285 1.3e-08 63.5 43 55.8
Medtr8g054100 Medicago truncatula HOM05D000876 ORTHO05D000285 1.3e-08 63.5 43 55.8
Hund22647 Selenicereus undatus HOM05D009081 ORTHO05D000285 1.3e-08 63.5 39 64.1
HanXRQChr09g0266751 Helianthus annuus HOM05D000876 ORTHO05D000285 1.8e-08 63.2 76 38.2
CiPaw.04G117800 Carya illinoinensis HOM05D000876 ORTHO05D000285 2.3e-08 62.8 70 37.1
Gorai.004G036600 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.3e-08 62.8 82 32.9
ECA233G3281 Erigeron canadensis HOM05D000124 ORTHO05D011211 3.9e-08 62.0 75 37.3
Gohir.D08G116700 Gossypium hirsutum HOM05D000876 ORTHO05D000285 3.9e-08 62.0 47 42.6
Gorai.003G031500 Gossypium raimondii HOM05D000876 ORTHO05D000285 3.9e-08 62.0 47 42.6
Gorai.006G019900 Gossypium raimondii HOM05D000876 ORTHO05D000285 3.9e-08 62.0 47 42.6
Gorai.007G190400 Gossypium raimondii HOM05D000876 ORTHO05D000285 3.9e-08 62.0 47 42.6
Gorai.010G149000 Gossypium raimondii HOM05D000876 ORTHO05D000285 3.9e-08 62.0 47 42.6
Gorai.011G122600 Gossypium raimondii HOM05D000876 ORTHO05D000285 3.9e-08 62.0 47 42.6
Gorai.N003000 Gossypium raimondii HOM05D000876 ORTHO05D000285 3.9e-08 62.0 47 42.6
Gorai.N004200 Gossypium raimondii HOM05D000876 ORTHO05D000285 3.9e-08 62.0 47 42.6
Medtr1g016370 Medicago truncatula HOM05D000876 ORTHO05D000285 3.9e-08 62.0 43 55.8
arahy.Tifrunner.gnm1.ann1.GG5U8X Arachis hypogaea HOM05D000876 ORTHO05D000285 5.1e-08 61.6 68 35.3
Gorai.009G342300 Gossypium raimondii HOM05D000876 ORTHO05D000285 5.1e-08 61.6 47 42.6
Gorai.010G124300 Gossypium raimondii HOM05D000876 ORTHO05D000285 5.1e-08 61.6 65 35.4
arahy.Tifrunner.gnm1.ann1.PEG6DJ Arachis hypogaea HOM05D000034 ORTHO05D000037 6.7e-08 61.2 68 35.3
Gorai.006G093000 Gossypium raimondii HOM05D000876 ORTHO05D000285 6.7e-08 61.2 68 32.4
HanXRQChr09g0265901 Helianthus annuus HOM05D000876 ORTHO05D000285 6.7e-08 61.2 75 37.3
TWI38G2154 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 6.7e-08 61.2 74 32.4
TWI60G1225 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 6.7e-08 61.2 68 33.8
arahy.Tifrunner.gnm1.ann1.R6BV2D Arachis hypogaea HOM05D000876 ORTHO05D000285 8.7e-08 60.8 84 32.1
CiPaw.08G085800 Carya illinoinensis HOM05D000876 ORTHO05D000285 8.7e-08 60.8 68 32.4
FvH4_6g38850 Fragaria vesca HOM05D000876 ORTHO05D000285 8.7e-08 60.8 66 34.8
Gorai.004G102900 Gossypium raimondii HOM05D000876 ORTHO05D000285 8.7e-08 60.8 70 32.9
Gorai.004G157500 Gossypium raimondii HOM05D000876 ORTHO05D000285 8.7e-08 60.8 47 40.4
Gorai.008G062400 Gossypium raimondii HOM05D000876 ORTHO05D000285 8.7e-08 60.8 47 40.4
Gorai.008G247700 Gossypium raimondii HOM05D000876 ORTHO05D000285 8.7e-08 60.8 47 40.4
Gorai.011G123600 Gossypium raimondii HOM05D000876 ORTHO05D000285 8.7e-08 60.8 47 40.4
Gorai.012G070700 Gossypium raimondii HOM05D000876 ORTHO05D000285 8.7e-08 60.8 44 45.5
HanXRQChr02g0051761 Helianthus annuus HOM05D009081 ORTHO05D000285 8.7e-08 60.8 75 37.3
Hund26339 Selenicereus undatus HOM05D009081 ORTHO05D011211 8.7e-08 60.8 39 71.8
arahy.Tifrunner.gnm1.ann1.8YPI5A Arachis hypogaea HOM05D000034 ORTHO05D000037 1.1e-07 60.5 91 33.0
arahy.Tifrunner.gnm1.ann1.AG0B9Q Arachis hypogaea HOM05D000034 ORTHO05D000285 1.1e-07 60.5 68 33.8
Gorai.011G190800 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.1e-07 60.5 65 35.4
arahy.Tifrunner.gnm1.ann1.2911W9 Arachis hypogaea HOM05D000876 ORTHO05D000285 1.5e-07 60.1 68 33.8
arahy.Tifrunner.gnm1.ann1.Z5ZQ3Q Arachis hypogaea HOM05D000034 ORTHO05D000037 1.5e-07 60.1 91 33.0
Gorai.009G359600 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.5e-07 60.1 47 40.4
Gorai.012G128500 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.5e-07 60.1 69 31.9
Gorai.006G056900 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.9e-07 59.7 47 40.4
HanXRQChr16g0509561 Helianthus annuus HOM05D000124 ORTHO05D000285 1.9e-07 59.7 75 37.3
QL04p079613 Quercus lobata HOM05D000876 ORTHO05D000285 1.9e-07 59.7 44 50.0
QL05p031161 Quercus lobata HOM05D000034 ORTHO05D000037 1.9e-07 59.7 44 50.0
TWI73G0844 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.9e-07 59.7 68 30.9
TWI74G0206 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 1.9e-07 59.7 68 30.9
arahy.Tifrunner.gnm1.ann1.7Y6611 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.5e-07 59.3 68 32.4
arahy.Tifrunner.gnm1.ann1.Z2QP4M Arachis hypogaea HOM05D000034 ORTHO05D000037 2.5e-07 59.3 68 33.8
Gorai.004G114400 Gossypium raimondii HOM05D000876 ORTHO05D000285 3.3e-07 58.9 64 39.1
Medtr8g105430 Medicago truncatula HOM05D000876 ORTHO05D000285 3.3e-07 58.9 67 37.3
ECA236G2545 Erigeron canadensis HOM05D009081 ORTHO05D000285 4.3e-07 58.5 75 37.3
QL01p024703 Quercus lobata HOM05D000876 ORTHO05D000285 4.3e-07 58.5 45 44.4
Ah.08g222740 Amaranthus hybridus HOM05D000876 ORTHO05D000285 5.7e-07 58.2 45 53.3
arahy.Tifrunner.gnm1.ann1.H2M43I Arachis hypogaea HOM05D000876 ORTHO05D000285 5.7e-07 58.2 65 36.9
Gorai.007G258900 Gossypium raimondii HOM05D000876 ORTHO05D000285 5.7e-07 58.2 51 35.3
Gorai.008G093400 Gossypium raimondii HOM05D000876 ORTHO05D000285 5.7e-07 58.2 69 30.4
Gorai.013G184300 Gossypium raimondii HOM05D000876 ORTHO05D000285 5.7e-07 58.2 68 30.9
HanXRQChr10g0300051 Helianthus annuus HOM05D000876 ORTHO05D000285 5.7e-07 58.2 45 46.7
FvH4_1g10461 Fragaria vesca HOM05D000034 ORTHO05D000037 7.4e-07 57.8 45 46.7
FAN10G2856 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.4e-07 57.8 45 46.7
FAN11G2191 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.4e-07 57.8 45 46.7
FAN14G4311 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.4e-07 57.8 66 33.3
FAN17G2644 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.4e-07 57.8 45 46.7
FAN20G0415 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.4e-07 57.8 45 46.7
Gorai.002G176400 Gossypium raimondii HOM05D000876 ORTHO05D000285 7.4e-07 57.8 47 42.6
Gorai.009G392800 Gossypium raimondii HOM05D000876 ORTHO05D000285 7.4e-07 57.8 66 33.3
Duzib128G0904 Durio zibethinus HOM05D000876 ORTHO05D000285 9.7e-07 57.4 47 42.6
FvH4_2g04530 Fragaria vesca HOM05D000034 ORTHO05D000037 9.7e-07 57.4 45 44.4
FvH4_2g11122 Fragaria vesca HOM05D000876 ORTHO05D000285 9.7e-07 57.4 45 44.4
FvH4_4g20923 Fragaria vesca HOM05D000876 ORTHO05D000285 9.7e-07 57.4 45 51.1
FvH4_5g23913 Fragaria vesca HOM05D000876 ORTHO05D000285 9.7e-07 57.4 45 51.1
FAN09G3146 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.7e-07 57.4 45 44.4
FAN09G3305 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.7e-07 57.4 45 44.4
FAN26G1613 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.7e-07 57.4 45 51.1
Hma1.2p1_0786F.1_g217690 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 9.7e-07 57.4 45 42.2
Lj1g0012065 Lotus japonicus HOM05D000876 ORTHO05D000285 9.7e-07 57.4 65 36.9
MD15G1314200 Malus domestica HOM05D000876 ORTHO05D000285 9.7e-07 57.4 45 46.7
Potri.010G076000 Populus trichocarpa HOM05D000876 ORTHO05D000285 9.7e-07 57.4 45 48.9
SGA_v2.0_scaffold44G16592 Striga asiatica HOM05D023076 ORTHO05D011211 9.7e-07 57.4 32 65.6
FAN23G0726 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.3e-06 57.0 45 46.7
Gorai.001G157800 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.3e-06 57.0 47 38.3
Gorai.012G085300 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.3e-06 57.0 47 38.3
Hma1.2p1_0344F.1_g131060 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.3e-06 57.0 45 40.0
Prupe.5G020800 Prunus persica HOM05D000876 ORTHO05D000285 1.3e-06 57.0 45 46.7
RcHm_v2.0_Chr7g0199281 Rosa chinensis HOM05D000876 ORTHO05D000285 1.3e-06 57.0 44 45.5
arahy.Tifrunner.gnm1.ann1.L4SQ9F Arachis hypogaea HOM05D000034 ORTHO05D000037 1.6e-06 56.6 45 46.7
ECA247G1396 Erigeron canadensis HOM05D009081 ORTHO05D000285 1.6e-06 56.6 45 48.9
Gorai.007G284700 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.6e-06 56.6 47 40.4
Gorai.011G083200 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.6e-06 56.6 67 31.3
Medtr4g043620 Medicago truncatula HOM05D009922 ORTHO05D000285 1.6e-06 56.6 67 35.8
QL01p028137 Quercus lobata HOM05D000876 ORTHO05D000285 1.6e-06 56.6 45 44.4
QL01p041709 Quercus lobata HOM05D000876 ORTHO05D000285 1.6e-06 56.6 45 46.7
QL02p030443 Quercus lobata HOM05D000876 ORTHO05D000285 1.6e-06 56.6 45 44.4
QL03p014458 Quercus lobata HOM05D000876 ORTHO05D000285 1.6e-06 56.6 45 46.7
QL04p036904 Quercus lobata HOM05D000876 ORTHO05D000285 1.6e-06 56.6 45 44.4
QL06p033300 Quercus lobata HOM05D000876 ORTHO05D000285 1.6e-06 56.6 45 46.7
QL08p009302 Quercus lobata HOM05D000876 ORTHO05D000285 1.6e-06 56.6 45 46.7
QL09p002249 Quercus lobata HOM05D000876 ORTHO05D000285 1.6e-06 56.6 45 44.4
QL10p040122 Quercus lobata HOM05D000876 ORTHO05D000285 1.6e-06 56.6 45 44.4
arahy.Tifrunner.gnm1.ann1.NV9TN2 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.2e-06 56.2 88 31.8
ECA240G4515 Erigeron canadensis HOM05D000034 ORTHO05D000037 2.2e-06 56.2 73 32.9
Gorai.005G210400 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.2e-06 56.2 47 40.4
Hma1.2p1_0148F.1_g066070 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 2.2e-06 56.2 45 40.0
Hma1.2p1_0148F.1_g066080 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 2.2e-06 56.2 45 40.0
Medtr5g055390 Medicago truncatula HOM05D000876 ORTHO05D000285 2.2e-06 56.2 54 42.6
Peaxi162Scf00002g02220 Petunia axillaris HOM05D000876 ORTHO05D000285 2.2e-06 56.2 66 36.4
RcHm_v2.0_Chr2g0153151 Rosa chinensis HOM05D000876 ORTHO05D000285 2.2e-06 56.2 45 44.4
TWI56G0298 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 2.2e-06 56.2 45 51.1
TWI63G0856 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 2.2e-06 56.2 68 32.4
TWI75G0176 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 2.2e-06 56.2 45 51.1
HPP92_008179 Vanilla planifolia HOM05D000876 ORTHO05D000285 2.2e-06 56.2 89 33.7
CsaV3_5G004940 Cucumis sativus L. HOM05D000876 ORTHO05D000285 2.8e-06 55.8 70 30.0
DCAR_025172 Daucus carota HOM05D000876 ORTHO05D000285 2.8e-06 55.8 45 46.7
FAN10G2724 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.8e-06 55.8 45 46.7
FAN19G0003 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.8e-06 55.8 45 44.4
Gorai.005G095500 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.8e-06 55.8 47 36.2
Hma1.2p1_0344F.1_g131050 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.8e-06 55.8 45 40.0
TPR.G20422 Trifolium pratense HOM05D000876 ORTHO05D000285 2.8e-06 55.8 40 50.0
TPR.G698 Trifolium pratense HOM05D000876 ORTHO05D000285 2.8e-06 55.8 43 51.2
TWI15G1211 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 2.8e-06 55.8 68 32.4
FAN04G1353 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.7e-06 55.5 44 50.0
FAN08G3019 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.7e-06 55.5 44 50.0
FAN12G1859 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.7e-06 55.5 44 50.0
Gorai.005G209400 Gossypium raimondii HOM05D000876 ORTHO05D000285 3.7e-06 55.5 47 40.4
Gorai.013G171200 Gossypium raimondii HOM05D000876 ORTHO05D000285 3.7e-06 55.5 47 38.3
Prupe.8G016500 Prunus persica HOM05D000876 ORTHO05D000285 3.7e-06 55.5 45 42.2
TWI15G1148 Tripterygium wilfordii HOM05D013465 ORTHO05D000285 3.7e-06 55.5 68 36.8
Gorai.004G173400 Gossypium raimondii HOM05D000876 ORTHO05D000285 4.8e-06 55.1 68 30.9
Gorai.006G045600 Gossypium raimondii HOM05D000876 ORTHO05D000285 4.8e-06 55.1 49 44.9
HanXRQChr05g0143471 Helianthus annuus HOM05D000876 ORTHO05D000285 4.8e-06 55.1 45 44.4
HanXRQChr14g0461341 Helianthus annuus HOM05D000876 ORTHO05D000285 4.8e-06 55.1 45 44.4
PSO507G0009 Papaver somniferum HOM05D000876 ORTHO05D000285 4.8e-06 55.1 45 48.9
FAN22G0137 Fragaria x ananassa HOM05D000876 ORTHO05D000285 6.3e-06 54.7 45 46.7
Gorai.007G119700 Gossypium raimondii HOM05D000876 ORTHO05D000285 6.3e-06 54.7 47 36.2
HanXRQChr09g0245471 Helianthus annuus HOM05D000876 ORTHO05D000285 6.3e-06 54.7 45 46.7
Hma1.2p1_1123F.1_g259380 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 6.3e-06 54.7 45 37.8
TWI39G0385 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 6.3e-06 54.7 45 48.9
HanXRQChr14g0446341 Helianthus annuus HOM05D000876 ORTHO05D000285 8.2e-06 54.3 66 34.8
Lj1g0019277 Lotus japonicus HOM05D000876 ORTHO05D000285 8.2e-06 54.3 45 51.1
Sc03g0004530 Simmondsia chinensis HOM05D000876 ORTHO05D000285 8.2e-06 54.3 67 34.3


User provided reference genes

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