Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund22470 Selenicereus undatus HOM05D005940 ORTHO05D007027 8.7e-187 656.8 318 100.0
EL10Ac2g03550 Beta vulgaris HOM05D005940 ORTHO05D007027 3.4e-74 282.7 335 49.3
AUR62020800 Chenopodium quinoa HOM05D005940 ORTHO05D007027 6.9e-67 258.5 307 49.2
TWI38G0416 Tripterygium wilfordii HOM05D005940 ORTHO05D007027 1.0e-65 254.6 331 44.1
AUR62027909 Chenopodium quinoa HOM05D005940 ORTHO05D007027 8.5e-65 251.5 340 44.4
RcHm_v2.0_Chr1g0364231 Rosa chinensis HOM05D005940 ORTHO05D007027 3.2e-64 249.6 319 42.9
FAN06G4195 Fragaria x ananassa HOM05D005940 ORTHO05D007027 6.1e-63 245.4 330 42.4
Cfa001588 Carpinus fangiana HOM05D005940 ORTHO05D007027 2.3e-62 243.4 333 42.0
GSVIVG01016348001 Vitis vinifera HOM05D005940 ORTHO05D007027 2.3e-62 243.4 332 41.9
FvH4_7g20280 Fragaria vesca HOM05D005940 ORTHO05D007027 3.0e-62 243.0 330 42.1
Prupe.2G219400 Prunus persica HOM05D005940 ORTHO05D007027 3.0e-62 243.0 328 42.1
FAN10G2498 Fragaria x ananassa HOM05D005940 ORTHO05D007027 5.1e-62 242.3 334 41.6
CiPaw.02G177100 Carya illinoinensis HOM05D005940 ORTHO05D007027 8.8e-62 241.5 328 42.1
Atru.chr12.628 Acer truncatum HOM05D005940 ORTHO05D007027 1.1e-61 241.1 323 42.7
FAN01G1689 Fragaria x ananassa HOM05D005940 ORTHO05D007027 2.0e-61 240.4 321 42.7
Prupe.2G216400 Prunus persica HOM05D005940 ORTHO05D007027 2.6e-61 240.0 328 41.8
Migut.F01794 Erythranthe guttata HOM05D005940 ORTHO05D007027 5.7e-61 238.8 336 42.0
QL08p056963 Quercus lobata HOM05D005940 ORTHO05D007027 4.8e-60 235.7 336 42.6
ClCG02G013840 Citrullus lanatus HOM05D005940 ORTHO05D007027 6.3e-60 235.3 335 41.8
Nitab4.5_0000061g0280 Nicotiana tabacum HOM05D005940 ORTHO05D007027 1.1e-59 234.6 335 41.5
Solyc04g049890.4 Solanum lycopersicum HOM05D005940 ORTHO05D007027 1.1e-59 234.6 324 41.4
MD01G1112500 Malus domestica HOM05D005940 ORTHO05D007027 1.4e-59 234.2 318 41.8
PGSC0003DMG400010575 Solanum tuberosum HOM05D005940 ORTHO05D007027 1.4e-59 234.2 331 40.5
ECA232G2986 Erigeron canadensis HOM05D005940 ORTHO05D007027 3.1e-59 233.0 338 41.7
Gorai.012G093100 Gossypium raimondii HOM05D005940 ORTHO05D007027 3.1e-59 233.0 337 40.1
Duzib114G0016 Durio zibethinus HOM05D005940 ORTHO05D007027 4.1e-59 232.6 335 40.3
DCAR_019137 Daucus carota HOM05D005940 ORTHO05D007027 5.3e-59 232.3 327 42.5
TAR623G0325 Trochodendron aralioides HOM05D005940 ORTHO05D007027 7.0e-59 231.9 333 41.7
Oeu055049.1 Olea europaea HOM05D005940 ORTHO05D007027 9.1e-59 231.5 339 42.2
Sopen04g020430 Solanum pennellii HOM05D005940 ORTHO05D007027 2.6e-58 229.9 331 40.2
Ciclev10033357m.g Citrus clementina HOM05D005940 ORTHO05D007027 3.5e-58 229.6 338 39.9
Potri.010G216500 Populus trichocarpa HOM05D005940 ORTHO05D007027 3.5e-58 229.6 337 41.2
Hma1.2p1_0192F.1_g083550 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 4.5e-58 229.2 345 42.0
Eucgr.G02795 Eucalyptus grandis HOM05D005940 ORTHO05D007027 1.0e-57 228.0 336 42.3
CsaV3_5G006320 Cucumis sativus L. HOM05D005940 ORTHO05D007027 2.2e-57 226.9 335 41.5
Sed0018989 Sechium edule HOM05D005940 ORTHO05D007027 2.9e-57 226.5 326 41.1
Cc09_g02600 Coffea canephora HOM05D005940 ORTHO05D007027 3.8e-57 226.1 336 41.7
Gohir.D04G082400 Gossypium hirsutum HOM05D005940 ORTHO05D007027 5.0e-57 225.7 338 38.8
HanXRQChr16g0510921 Helianthus annuus HOM05D005940 ORTHO05D007027 5.0e-57 225.7 332 39.2
Nn2g10645 Nelumbo nucifera HOM05D005940 ORTHO05D007027 5.0e-57 225.7 328 40.2
CANSAT25G0128 Cannabis sativa HOM05D005940 ORTHO05D007027 6.5e-57 225.3 343 39.1
Glyma.20G145700 Glycine max HOM05D005940 ORTHO05D007027 1.1e-56 224.6 329 40.7
Lsat_1_v5_gn_1_128021 Lactuca sativa HOM05D005940 ORTHO05D007027 1.4e-56 224.2 327 40.7
PSO170G0010 Papaver somniferum HOM05D005940 ORTHO05D007027 9.4e-56 221.5 326 38.7
PSO357G0422 Papaver somniferum HOM05D005940 ORTHO05D007027 1.2e-55 221.1 325 39.1
Psat6g207800 Pisum sativum HOM05D005940 ORTHO05D007027 1.6e-55 220.7 332 39.8
VMungo0720G1649 Vigna mungo HOM05D005940 ORTHO05D007027 4.7e-55 219.2 325 39.7
Medtr1g103900 Medicago truncatula HOM05D005940 ORTHO05D007027 8.0e-55 218.4 331 39.9
Lj5g0027680 Lotus japonicus HOM05D005940 ORTHO05D007027 1.8e-54 217.2 329 39.5
Peaxi162Scf00208g00211 Petunia axillaris HOM05D005940 ORTHO05D007027 3.0e-54 216.5 331 39.0
PGR102G2278 Punica granatum HOM05D005940 ORTHO05D007027 3.0e-54 216.5 330 39.7
arahy.Tifrunner.gnm1.ann1.N3JKH2 Arachis hypogaea HOM05D005940 ORTHO05D007027 6.7e-54 215.3 327 38.8
arahy.Tifrunner.gnm1.ann1.3UA0UH Arachis hypogaea HOM05D005940 ORTHO05D007027 2.0e-53 213.8 327 38.8
Ca_10908_v3 Cicer arietinum L. HOM05D005940 ORTHO05D007027 2.6e-53 213.4 329 38.3
Medtr1g030720 Medicago truncatula HOM05D005940 ORTHO05D007027 5.7e-53 212.2 331 38.1
Medtr1g103870 Medicago truncatula HOM05D005940 ORTHO05D007027 2.2e-52 210.3 330 37.9
TPR.G5540 Trifolium pratense HOM05D005940 ORTHO05D007027 4.8e-52 209.1 331 38.1
Aqoxy7G03246 Aquilegia oxysepala HOM05D005940 ORTHO05D007027 8.2e-52 208.4 328 39.6
THA.LOC104809986 Tarenaya hassleriana HOM05D005940 ORTHO05D007027 5.3e-51 205.7 326 41.1
Phvul.007G056900 Phaseolus vulgaris HOM05D005940 ORTHO05D007027 2.0e-50 203.8 325 38.8
CDE11G0619 Ceratophyllum demersum HOM05D005940 ORTHO05D007027 1.5e-48 197.6 319 42.0
Thecc.10G067000 Theobroma cacao HOM05D005940 ORTHO05D007027 4.2e-48 196.1 363 35.0
Lalb_Chr21g0304671 Lupinus albus HOM05D005940 ORTHO05D007027 3.6e-47 193.0 328 37.5
Aa31sc33G20 Aethionema arabicum HOM05D005940 ORTHO05D007027 4.7e-47 192.6 349 38.1
Lj1A925T62 Lonicera japonica HOM05D005940 ORTHO05D007027 1.0e-46 191.4 308 37.7
HPP92_019787 Vanilla planifolia HOM05D005940 ORTHO05D007027 9.7e-45 184.9 314 36.9
BcaB01g00141 Brassica carinata HOM05D005940 ORTHO05D007027 1.3e-44 184.5 322 37.9
Thhalv10010491m.g Eutrema salsugineum HOM05D005940 ORTHO05D007027 1.7e-44 184.1 330 38.2
BolC8t50626H Brassica oleracea HOM05D005940 ORTHO05D007027 6.3e-44 182.2 321 38.0
Carub.0005s2159 Capsella rubella HOM05D005940 ORTHO05D007027 6.3e-44 182.2 330 37.3
CARHR164970 Cardamine hirsuta HOM05D005940 ORTHO05D007027 8.3e-44 181.8 322 38.2
Sp5g07450 Schrenkiella parvula HOM05D005940 ORTHO05D007027 8.3e-44 181.8 330 38.2
SalBow3G3596 Salvia bowleyana HOM05D005940 ORTHO05D007027 1.1e-43 181.4 338 35.2
AL5G36080 Arabidopsis lyrata HOM05D005940 ORTHO05D007027 1.4e-43 181.0 330 39.4
BcaNung04648 Brassica carinata HOM05D005940 ORTHO05D007027 1.8e-43 180.6 321 37.4
C08p30200 Brassica napus HOM05D005940 ORTHO05D007027 1.8e-43 180.6 321 37.4
Dinv31364 Davidia involucrata HOM05D005940 ORTHO05D007027 1.8e-43 180.6 298 39.3
Sc06g0001810 Simmondsia chinensis HOM05D005940 ORTHO05D007027 3.1e-43 179.9 146 65.1
A09p47960 Brassica napus HOM05D005940 ORTHO05D007027 4.1e-43 179.5 321 37.4
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 2.0e-42 177.2 322 35.4
BraA09t40251Z Brassica rapa HOM05D005940 ORTHO05D007027 1.0e-41 174.9 321 37.4
FAN03G1319 Fragaria x ananassa HOM05D005940 ORTHO05D007027 2.2e-41 173.7 289 38.1
CAN.G693.9 Capsicum annuum HOM05D005940 ORTHO05D007027 2.5e-40 170.2 284 38.7
MELO3C011725.2 Cucumis melo HOM05D005940 ORTHO05D007027 5.5e-40 169.1 362 34.8
Hma1.2p1_0192F.1_g083560 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 1.7e-36 157.5 150 56.7
Manes.10G041400 Manihot esculenta HOM05D005940 ORTHO05D007027 2.4e-35 153.7 284 36.6
Gohir.A05G343900 Gossypium hirsutum HOM05D005940 ORTHO05D007027 4.1e-35 152.9 273 35.9
Zm00001eb194920 Zea mays HOM05D005940 ORTHO05D007027 4.1e-35 152.9 320 33.8
COL.COLO4_23758 Corchorus olitorius HOM05D005940 ORTHO05D007027 7.0e-35 152.1 146 52.7
ATR0594G026 Amborella trichopoda HOM05D005940 ORTHO05D007027 3.5e-34 149.8 267 37.5
Cpa.g.sc1.266 Carica papaya HOM05D005940 ORTHO05D007027 5.0e-33 146.0 273 36.6
Rhsim09G0154600 Rhododendron simsii HOM05D005940 ORTHO05D007027 1.5e-32 144.4 268 36.9
Nitab4.5_0003582g0030 Nicotiana tabacum HOM05D005940 ORTHO05D007027 7.2e-32 142.1 147 51.7
Sabra10G0167600 Salix brachista HOM05D005940 ORTHO05D007027 7.2e-32 142.1 274 35.4
Mapoly0016s0023 Marchantia polymorpha HOM05D005940 ORTHO05D007027 8.3e-28 128.6 324 30.9
CSS0031020 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 1.4e-27 127.9 112 57.1
AagrBONN_evm.TU.Sc2ySwM_344.1014 Anthoceros agrestis HOM05D005940 ORTHO05D007027 1.8e-27 127.5 312 31.4
Haze_16942 Corylus avellana HOM05D005940 ORTHO05D007027 3.1e-27 126.7 216 37.0
SMO329G0058 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 7.0e-27 125.6 290 32.8
AT3G54970 Arabidopsis thaliana HOM05D005940 ORTHO05D007027 7.8e-26 122.1 258 34.5
SMO201G0153 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 7.8e-26 122.1 265 34.7
BcaNung04643 Brassica carinata HOM05D005940 ORTHO05D007027 1.3e-25 121.3 138 50.7
Pp3c1_190 Physcomitrium patens HOM05D005940 ORTHO05D007027 2.9e-25 120.2 341 32.6
PGR142G2620 Punica granatum HOM05D005940 ORTHO05D007027 2.1e-15 87.4 119 47.9
MBI14_g28170_MAGBIO Magnolia biondii HOM05D005940 ORTHO05D007027 2.8e-15 87.0 65 60.0
ECA240G2370 Erigeron canadensis HOM05D005940 ORTHO05D007027 1.1e-14 85.1 63 58.7
Sopen09g009530 Solanum pennellii HOM05D005940 ORTHO05D007027 1.8e-14 84.3 61 57.4
Haze_16941 Corylus avellana HOM05D005940 ORTHO05D007027 2.6e-13 80.5 90 45.6
SEGI_30186 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 4.9e-12 76.3 70 48.6
Medtr1g030710 Medicago truncatula HOM05D005940 ORTHO05D007027 1.1e-11 75.1 166 34.9
SHI28162 Sapria himalayana HOM05D005940 ORTHO05D007027 1.4e-11 74.7 84 45.2
HPP92_019693 Vanilla planifolia HOM05D005940 ORTHO05D002769 7.0e-11 72.4 58 62.1
SEGI_22112 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 6.6e-09 65.9 199 28.6
CBR_g3301 Chara braunii HOM05D003248 ORTHO05D000301 8.6e-09 65.5 78 44.9
FAN06G2675 Fragaria x ananassa HOM05D005940 ORTHO05D007027 2.1e-07 60.8 220 29.5
Os02g0252600 Oryza sativa ssp. japonica HOM05D005940 ORTHO05D007027 3.6e-07 60.1 193 29.0
MCO14G149 Micromonas commoda HOM05D005940 ORTHO05D007027 3.1e-06 57.0 118 38.1
PRCOL_00002492 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 5.2e-06 56.2 119 35.3


User provided reference genes

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