Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund22275 Selenicereus undatus HOM05D007039 ORTHO05D008886 2.1e-146 522.3 257 100.0
AUR62041513 Chenopodium quinoa HOM05D007039 ORTHO05D008886 1.8e-113 412.9 250 76.8
Ah.06g186600 Amaranthus hybridus HOM05D007039 ORTHO05D008886 2.8e-111 405.6 250 76.4
EL10Ac4g08687 Beta vulgaris HOM05D007039 ORTHO05D008886 2.4e-110 402.5 250 76.4
Sc20g0001160 Simmondsia chinensis HOM05D007039 ORTHO05D008886 9.1e-110 400.6 239 77.0
Rhsim09G0142000 Rhododendron simsii HOM05D007039 ORTHO05D008886 1.1e-107 393.7 251 73.7
AUR62042080 Chenopodium quinoa HOM05D007039 ORTHO05D008886 1.4e-105 386.7 233 77.3
GSVIVG01001001001 Vitis vinifera HOM05D007039 ORTHO05D008886 2.0e-104 382.9 251 73.3
Oeu025598.1 Olea europaea HOM05D007039 ORTHO05D008886 5.4e-102 374.8 247 72.9
Cc02_g09650 Coffea canephora HOM05D007039 ORTHO05D008886 2.0e-101 372.9 247 72.1
TWI63G1767 Tripterygium wilfordii HOM05D007039 ORTHO05D008886 5.9e-101 371.3 254 70.9
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 1.3e-100 370.2 250 70.0
CiPaw.14G032800 Carya illinoinensis HOM05D007039 ORTHO05D008886 1.3e-100 370.2 247 71.7
Ciclev10016452m.g Citrus clementina HOM05D007039 ORTHO05D008886 1.3e-100 370.2 237 71.7
CSS0023700 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.7e-100 369.8 250 70.4
Dinv11837 Davidia involucrata HOM05D007039 ORTHO05D008886 2.3e-100 369.4 250 72.8
HanXRQChr08g0217501 Helianthus annuus HOM05D007039 ORTHO05D008886 5.0e-100 368.2 241 71.4
Manes.07G087400 Manihot esculenta HOM05D007039 ORTHO05D008886 2.5e-99 365.9 233 75.1
Atru.chr12.1023 Acer truncatum HOM05D007039 ORTHO05D008886 3.3e-99 365.5 247 69.2
MD02G1261300 Malus domestica HOM05D007039 ORTHO05D008886 3.3e-99 365.5 238 72.3
Prupe.2G067300 Prunus persica HOM05D007039 ORTHO05D008886 3.3e-99 365.5 238 71.8
vmacro10308 Vaccinium macrocarpon HOM05D007039 ORTHO05D008886 3.3e-99 365.5 297 62.3
Lj2A32T31 Lonicera japonica HOM05D007039 ORTHO05D008886 4.3e-99 365.2 238 72.7
Thecc.07G140700 Theobroma cacao HOM05D007039 ORTHO05D008886 1.6e-98 363.2 241 70.1
Lsat_1_v5_gn_8_24101 Lactuca sativa HOM05D007039 ORTHO05D008886 4.7e-98 361.7 236 71.2
SalBow6G1307 Salvia bowleyana HOM05D007039 ORTHO05D008886 4.7e-98 361.7 237 72.6
Migut.F00878 Erythranthe guttata HOM05D007039 ORTHO05D008886 6.1e-98 361.3 237 71.7
CANSAT56G1368 Cannabis sativa HOM05D007039 ORTHO05D008886 1.8e-97 359.8 240 70.8
Eucgr.J00258 Eucalyptus grandis HOM05D007039 ORTHO05D008886 1.8e-97 359.8 247 69.2
Potri.010G238700 Populus trichocarpa HOM05D007039 ORTHO05D008886 3.0e-97 359.0 251 69.7
Sabra10G0186900 Salix brachista HOM05D007039 ORTHO05D008886 3.0e-97 359.0 250 68.4
RcHm_v2.0_Chr1g0331721 Rosa chinensis HOM05D007039 ORTHO05D008886 6.8e-97 357.8 247 69.2
CSS0047124 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.2e-96 357.1 240 69.2
Gorai.010G214100 Gossypium raimondii HOM05D007039 ORTHO05D008886 4.4e-96 355.1 249 67.9
TAR623G0720 Trochodendron aralioides HOM05D007039 ORTHO05D008886 4.4e-96 355.1 254 68.5
Potri.008G020500 Populus trichocarpa HOM05D007039 ORTHO05D008886 9.8e-96 354.0 233 71.7
Gohir.A06G173100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 1.7e-95 353.2 249 67.5
Sopen04g004820 Solanum pennellii HOM05D007039 ORTHO05D008886 2.2e-95 352.8 252 70.2
COL.COLO4_17444 Corchorus olitorius HOM05D007039 ORTHO05D008886 2.9e-95 352.4 241 70.5
THA.LOC104801579 Tarenaya hassleriana HOM05D007039 ORTHO05D008886 2.9e-95 352.4 235 69.8
Solyc04g009700.3 Solanum lycopersicum HOM05D007039 ORTHO05D008886 3.7e-95 352.1 252 69.4
Gorai.010G214000 Gossypium raimondii HOM05D007039 ORTHO05D008886 6.4e-95 351.3 249 67.5
Duzib106G1061 Durio zibethinus HOM05D007039 ORTHO05D008886 8.3e-95 350.9 247 67.2
Gohir.D06G182700 Gossypium hirsutum HOM05D007039 ORTHO05D008886 8.3e-95 350.9 249 67.5
PGSC0003DMG400016998 Solanum tuberosum HOM05D007039 ORTHO05D008886 8.3e-95 350.9 252 69.4
FAN06G3803 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.1e-94 350.5 252 67.1
FAN03G1588 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.4e-94 350.1 256 66.4
Gohir.D06G183000 Gossypium hirsutum HOM05D007039 ORTHO05D008886 1.8e-94 349.7 254 66.1
Gohir.D06G183100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 3.2e-94 349.0 249 67.5
MD07G1059500 Malus domestica HOM05D007039 ORTHO05D008886 3.2e-94 349.0 241 69.3
CAN.G186.55 Capsicum annuum HOM05D007039 ORTHO05D008886 7.0e-94 347.8 252 67.5
arahy.Tifrunner.gnm1.ann1.2NV5LW Arachis hypogaea HOM05D007039 ORTHO05D008886 9.2e-94 347.4 240 69.2
FAN01G2006 Fragaria x ananassa HOM05D007039 ORTHO05D008886 9.2e-94 347.4 256 66.8
arahy.Tifrunner.gnm1.ann1.XC1RGZ Arachis hypogaea HOM05D007039 ORTHO05D008886 1.6e-93 346.7 240 69.2
Ca_25665_v3 Cicer arietinum L. HOM05D007039 ORTHO05D008886 3.5e-93 345.5 238 70.6
SGA_v2.0_scaffold62G21336 Striga asiatica HOM05D007039 ORTHO05D008886 1.0e-92 344.0 252 65.5
Oeu036842.1 Olea europaea HOM05D007039 ORTHO05D008886 2.3e-92 342.8 233 71.2
Glyma.20G110700 Glycine max HOM05D007039 ORTHO05D008886 5.0e-92 341.7 238 67.2
Phvul.007G022300 Phaseolus vulgaris HOM05D007039 ORTHO05D008886 5.0e-92 341.7 238 67.2
Aqoxy2G01207 Aquilegia oxysepala HOM05D007039 ORTHO05D008886 6.6e-92 341.3 247 66.4
Nn6g34917 Nelumbo nucifera HOM05D007039 ORTHO05D008886 6.6e-92 341.3 256 65.2
Lj5g0024269 Lotus japonicus HOM05D007039 ORTHO05D008886 2.5e-91 339.3 234 69.7
TPR.G2471 Trifolium pratense HOM05D007039 ORTHO05D008886 7.3e-91 337.8 234 68.8
VMungo0720G0617 Vigna mungo HOM05D007039 ORTHO05D008886 7.3e-91 337.8 238 67.2
FAN10G1571 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.6e-90 336.7 270 62.6
unitig_748.g8774 Utricularia gibba HOM05D007039 ORTHO05D008886 2.1e-90 336.3 251 66.1
Lalb_Chr06g0166411 Lupinus albus HOM05D007039 ORTHO05D008886 2.3e-89 332.8 237 66.2
Medtr1g112080 Medicago truncatula HOM05D007039 ORTHO05D008886 5.2e-89 331.6 241 67.2
QL04p044873 Quercus lobata HOM05D007039 ORTHO05D008886 8.9e-89 330.9 240 67.1
Os01g0859400 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 5.8e-88 328.2 250 61.2
PSO384G1372 Papaver somniferum HOM05D007039 ORTHO05D008886 1.3e-87 327.0 240 65.8
Psat6g231000 Pisum sativum HOM05D007039 ORTHO05D008886 1.3e-87 327.0 237 67.9
Zm00001eb147230 Zea mays HOM05D007039 ORTHO05D008886 2.2e-87 326.2 250 62.0
PSO339G1176 Papaver somniferum HOM05D007039 ORTHO05D008886 1.1e-86 323.9 240 65.0
Zm00001eb366890 Zea mays HOM05D007039 ORTHO05D008886 5.4e-86 321.6 250 61.6
Sed0014501 Sechium edule HOM05D007039 ORTHO05D008886 3.5e-85 318.9 247 61.1
MELO3C019894.2 Cucumis melo HOM05D007039 ORTHO05D008886 1.3e-84 317.0 247 61.9
ClCG08G008260 Citrullus lanatus HOM05D007039 ORTHO05D008886 3.3e-83 312.4 289 54.7
Cpa.g.sc56.15 Carica papaya HOM05D007039 ORTHO05D008886 4.3e-83 312.0 180 76.7
Nitab4.5_0003927g0060 Nicotiana tabacum HOM05D007039 ORTHO05D008886 2.1e-82 309.7 246 65.4
TAR633G1803 Trochodendron aralioides HOM05D007039 ORTHO05D008886 2.1e-82 309.7 239 62.8
HPP92_006806 Vanilla planifolia HOM05D007039 ORTHO05D008886 2.3e-81 306.2 234 62.0
Peaxi162Scf00195g01020 Petunia axillaris HOM05D007039 ORTHO05D008886 2.0e-80 303.1 254 61.4
ECA233G2799 Erigeron canadensis HOM05D007039 ORTHO05D008886 9.8e-80 300.8 189 72.5
Dinv09617 Davidia involucrata HOM05D007039 ORTHO05D008886 1.3e-79 300.4 251 63.3
HPP92_009745 Vanilla planifolia HOM05D007039 ORTHO05D008886 7.6e-72 274.6 231 55.0
HPP92_009768 Vanilla planifolia HOM05D007039 ORTHO05D008886 4.1e-70 268.9 231 54.1
Zm00001eb092690 Zea mays HOM05D007039 ORTHO05D008886 5.4e-70 268.5 236 52.1
PGR142G0235 Punica granatum HOM05D007039 ORTHO05D008886 3.5e-69 265.8 181 67.4
MSTRG.9060 Avicennia marina HOM05D007039 ORTHO05D008886 8.6e-68 261.2 179 66.5
Oeu036841.1 Olea europaea HOM05D007039 ORTHO05D008886 8.6e-68 261.2 179 70.4
Glyma.10G279000 Glycine max HOM05D007039 ORTHO05D008886 1.1e-67 260.8 237 56.5
Os12g0152800 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 1.1e-67 260.8 237 51.5
Eucgr.J00257 Eucalyptus grandis HOM05D007039 ORTHO05D008886 1.5e-67 260.4 182 68.7
CSS0008887 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 2.8e-66 256.1 187 65.2
PGSC0003DMG400023289 Solanum tuberosum HOM05D007039 ORTHO05D008886 4.7e-66 255.4 180 67.8
FvH4_7g05130 Fragaria vesca HOM05D007039 ORTHO05D008886 3.1e-65 252.7 182 65.9
CsaV3_6G004220 Cucumis sativus L. HOM05D007039 ORTHO05D008886 1.7e-60 236.9 180 61.7
Mapoly0010s0050 Marchantia polymorpha HOM05D007039 ORTHO05D008886 1.1e-59 234.2 227 47.6
SMO367G0592 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 2.5e-59 233.0 206 54.4
CSS0041399 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.3e-58 230.7 178 63.5
Pp3c15_5790 Physcomitrium patens HOM05D007039 ORTHO05D008886 6.2e-58 228.4 239 46.0
CBR_g32363 Chara braunii HOM05D007039 ORTHO05D008886 2.4e-54 216.5 205 48.3
AagrBONN_evm.TU.Sc2ySwM_362.1562 Anthoceros agrestis HOM05D007039 ORTHO05D008886 5.4e-54 215.3 237 44.7
AagrBONN_evm.TU.Sc2ySwM_228.3073 Anthoceros agrestis HOM05D007039 ORTHO05D008886 1.0e-52 211.1 214 46.3
CDE08G0883 Ceratophyllum demersum HOM05D007039 ORTHO05D008886 4.3e-51 205.7 147 61.2
Zm00001eb197030 Zea mays HOM05D007039 ORTHO05D008886 1.4e-49 200.7 178 49.4
DCAR_019005 Daucus carota HOM05D007039 ORTHO05D008886 1.9e-46 190.3 109 71.6
SMO353G0277 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 7.1e-38 161.8 161 48.4
Cre01.g018100 Chlamydomonas reinhardtii HOM05D007039 ORTHO05D008886 8.2e-34 148.3 207 35.7
Nitab4.5_0000691g0070 Nicotiana tabacum HOM05D007039 ORTHO05D008886 3.0e-28 129.8 245 39.6
MD04G1248500 Malus domestica HOM05D007039 ORTHO05D008886 1.9e-27 127.1 105 62.9
PRCOL_00002076 Prasinoderma coloniale HOM05D007039 ORTHO05D008886 6.9e-25 118.6 241 28.6


User provided reference genes

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