Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund22213 Selenicereus undatus HOM05D005252 ORTHO05D006788 0.0e+00 1120.9 555 100.0
Ah.06g191550 Amaranthus hybridus HOM05D005252 ORTHO05D006788 3.4e-146 522.7 591 50.1
EL10Ac4g08917 Beta vulgaris HOM05D005252 ORTHO05D006788 5.0e-145 518.8 593 49.6
Hma1.2p1_0158F.1_g069575 Hydrangea macrophylla HOM05D005252 ORTHO05D006788 3.2e-128 463.0 593 45.2
TAR622G0726 Trochodendron aralioides HOM05D005252 ORTHO05D006788 3.2e-128 463.0 586 45.4
CSS0014125 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 2.7e-127 459.9 600 45.8
AUR62004761 Chenopodium quinoa HOM05D005252 ORTHO05D006788 3.6e-127 459.5 569 46.2
Cfa007750 Carpinus fangiana HOM05D005252 ORTHO05D006788 9.7e-125 451.4 595 43.9
Haze_14323 Corylus avellana HOM05D005252 ORTHO05D006788 9.7e-125 451.4 593 43.7
Actinidia28776 Actinidia chinensis HOM05D005252 ORTHO05D006788 6.3e-124 448.7 593 44.4
CSS0009455 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 1.1e-123 448.0 609 44.8
Cpa.g.sc178.38 Carica papaya HOM05D005252 ORTHO05D006788 1.1e-123 448.0 592 44.3
AUR62037491 Chenopodium quinoa HOM05D005252 ORTHO05D006788 5.3e-123 445.7 445 52.6
Dinv19082 Davidia involucrata HOM05D000783 ORTHO05D000705 2.9e-121 439.9 575 46.1
QL02p064187 Quercus lobata HOM05D005252 ORTHO05D006788 6.5e-121 438.7 602 43.5
Atru.chr1.2124 Acer truncatum HOM05D005252 ORTHO05D006788 1.1e-120 438.0 590 42.0
Potri.004G081400 Populus trichocarpa HOM05D005252 ORTHO05D006788 1.5e-120 437.6 594 42.9
Glyma.14G209800 Glycine max HOM05D005252 ORTHO05D006788 4.2e-120 436.0 593 42.2
Ca_05755_v3 Cicer arietinum L. HOM05D005252 ORTHO05D006788 6.1e-119 432.2 594 42.3
PSO063G5026 Papaver somniferum HOM05D005252 ORTHO05D006788 6.1e-119 432.2 590 42.5
VMungo0647G0073 Vigna mungo HOM05D005252 ORTHO05D006788 8.0e-119 431.8 592 42.2
LjContig00141g0010829 Lotus japonicus HOM05D005252 ORTHO05D006788 5.2e-118 429.1 593 42.7
PSO782G3987 Papaver somniferum HOM05D005252 ORTHO05D006788 1.5e-117 427.6 590 42.2
RcHm_v2.0_Chr3g0488621 Rosa chinensis HOM05D005252 ORTHO05D006788 1.5e-117 427.6 586 43.0
Aqoxy3G04163 Aquilegia oxysepala HOM05D005252 ORTHO05D006788 1.7e-116 424.1 593 42.5
Phvul.008G241400 Phaseolus vulgaris HOM05D005252 ORTHO05D006788 1.7e-116 424.1 592 41.7
Ciclev10011537m.g Citrus clementina HOM05D005252 ORTHO05D006788 1.4e-115 421.0 595 41.5
ClCG05G011370 Citrullus lanatus HOM05D005252 ORTHO05D006788 4.1e-115 419.5 594 42.1
MBI06_g19632_MAGBIO Magnolia biondii HOM05D005252 ORTHO05D006788 3.5e-114 416.4 597 42.2
Lalb_Chr04g0251511 Lupinus albus HOM05D005252 ORTHO05D006788 5.9e-114 415.6 592 41.9
CANSAT56G0277 Cannabis sativa HOM05D005252 ORTHO05D006788 1.0e-113 414.8 596 41.4
MD17G1287300 Malus domestica HOM05D005252 ORTHO05D006788 2.9e-113 413.3 590 42.5
Prupe.3G014000 Prunus persica HOM05D005252 ORTHO05D006788 2.9e-113 413.3 595 42.0
Lj2C511T2 Lonicera japonica HOM05D005252 ORTHO05D006788 5.0e-113 412.5 589 41.8
Medtr5g076640 Medicago truncatula HOM05D005252 ORTHO05D006788 1.1e-112 411.4 592 41.6
arahy.Tifrunner.gnm1.ann1.UX6KKC Arachis hypogaea HOM05D005252 ORTHO05D006788 1.9e-112 410.6 592 39.9
Cc07_g12720 Coffea canephora HOM05D005252 ORTHO05D006788 1.9e-112 410.6 584 42.0
TPR.G5289 Trifolium pratense HOM05D005252 ORTHO05D006788 3.3e-112 409.8 595 41.2
Duzib133G0566 Durio zibethinus HOM05D005252 ORTHO05D006788 4.2e-112 409.5 591 42.3
FAN28G2815 Fragaria x ananassa HOM05D005252 ORTHO05D006788 2.1e-111 407.1 596 40.4
Nn5g27060 Nelumbo nucifera HOM05D005252 ORTHO05D006788 2.1e-111 407.1 597 40.5
Sed0007469 Sechium edule HOM05D005252 ORTHO05D006788 4.7e-111 406.0 595 41.0
CSS0013830 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 8.0e-111 405.2 554 44.0
FvH4_1g27420 Fragaria vesca HOM05D005252 ORTHO05D006788 5.2e-110 402.5 596 40.6
Eucgr.F02912 Eucalyptus grandis HOM05D005252 ORTHO05D006788 2.0e-109 400.6 571 41.7
GSVIVG01035253001 Vitis vinifera HOM05D005252 ORTHO05D006788 2.6e-109 400.2 588 40.8
THA.LOC104820865 Tarenaya hassleriana HOM05D005252 ORTHO05D006788 9.8e-109 398.3 600 39.5
Psat2g042800 Pisum sativum HOM05D005252 ORTHO05D006788 1.3e-108 397.9 592 39.7
COL.COLO4_20051 Corchorus olitorius HOM05D005252 ORTHO05D006788 2.8e-108 396.7 598 39.3
DCAR_003403 Daucus carota HOM05D005252 ORTHO05D006788 2.4e-107 393.7 558 41.0
PGR004G2027 Punica granatum HOM05D005252 ORTHO05D006788 3.1e-107 393.3 584 39.0
vmacro18507 Vaccinium macrocarpon HOM05D005252 ORTHO05D006788 9.2e-107 391.7 552 44.2
Aa31LG11G12430 Aethionema arabicum HOM05D005252 ORTHO05D006788 4.5e-106 389.4 588 40.5
Gohir.D12G051000 Gossypium hirsutum HOM05D005252 ORTHO05D006788 2.9e-105 386.7 598 39.8
Lsat_1_v5_gn_2_71861 Lactuca sativa HOM05D005252 ORTHO05D006788 8.6e-105 385.2 591 37.6
Gorai.008G054300 Gossypium raimondii HOM05D005252 ORTHO05D006788 1.1e-104 384.8 598 39.6
Gohir.A12G052400 Gossypium hirsutum HOM05D005252 ORTHO05D006788 1.9e-104 384.0 595 39.2
FAN28G2525 Fragaria x ananassa HOM05D005252 ORTHO05D006788 3.3e-104 383.3 580 39.7
A02p04080 Brassica napus HOM05D005252 ORTHO05D006788 9.5e-104 381.7 595 39.0
BraA02t05370Z Brassica rapa HOM05D005252 ORTHO05D006788 9.5e-104 381.7 598 39.0
BcaC03g18544 Brassica carinata HOM05D005252 ORTHO05D006788 1.2e-103 381.3 595 38.8
Thhalv10015946m.g Eutrema salsugineum HOM05D005252 ORTHO05D006788 1.2e-103 381.3 594 38.7
arahy.Tifrunner.gnm1.ann1.Y82BEI Arachis hypogaea HOM05D005252 ORTHO05D006788 2.1e-103 380.6 592 38.2
Sp6g26990 Schrenkiella parvula HOM05D005252 ORTHO05D006788 3.6e-103 379.8 589 39.7
Hma1.2p1_0158F.1_g069580 Hydrangea macrophylla HOM05D005252 ORTHO05D006788 1.0e-102 378.3 449 45.9
Sopen02g025950 Solanum pennellii HOM05D005252 ORTHO05D006788 1.4e-102 377.9 589 39.0
C02p08920 Brassica napus HOM05D005252 ORTHO05D006788 1.8e-102 377.5 596 38.3
CARHR195970 Cardamine hirsuta HOM05D005252 ORTHO05D006788 1.8e-102 377.5 599 38.4
SGA_v2.0_scaffold115G32046 Striga asiatica HOM05D005252 ORTHO05D006788 8.9e-102 375.2 593 38.4
BcaNung00410 Brassica carinata HOM05D005252 ORTHO05D006788 1.2e-101 374.8 597 38.7
BolC2t06801H Brassica oleracea HOM05D005252 ORTHO05D006788 1.5e-101 374.4 595 38.2
FAN23G1936 Fragaria x ananassa HOM05D005252 ORTHO05D006788 1.5e-101 374.4 606 38.6
Sabra04G0054100 Salix brachista HOM05D005252 ORTHO05D006788 1.5e-101 374.4 580 40.2
AL6G28290 Arabidopsis lyrata HOM05D005252 ORTHO05D006788 2.6e-101 373.6 603 38.6
Oeu060821.2 Olea europaea HOM05D005252 ORTHO05D006788 2.6e-101 373.6 579 39.4
SalBow5G4267 Salvia bowleyana HOM05D005252 ORTHO05D006788 2.6e-101 373.6 594 37.7
TWI74G0077 Tripterygium wilfordii HOM05D005252 ORTHO05D006788 2.6e-101 373.6 557 40.4
Solyc02g081320.4 Solanum lycopersicum HOM05D005252 ORTHO05D006788 3.4e-101 373.2 589 38.7
arahy.Tifrunner.gnm1.ann1.2Q625H Arachis hypogaea HOM05D005252 ORTHO05D006788 5.8e-101 372.5 563 40.0
Zm00001eb320090 Zea mays HOM05D005252 ORTHO05D006788 9.8e-101 371.7 586 40.1
PGSC0003DMG400016732 Solanum tuberosum HOM05D005252 ORTHO05D006788 1.3e-100 371.3 589 38.2
Rhsim08G0021900 Rhododendron simsii HOM05D005252 ORTHO05D006788 1.7e-100 370.9 516 43.0
Nitab4.5_0008137g0010 Nicotiana tabacum HOM05D005252 ORTHO05D006788 2.9e-100 370.2 583 37.6
Nitab4.5_0000483g0240 Nicotiana tabacum HOM05D005252 ORTHO05D006788 8.3e-100 368.6 582 37.1
Manes.01G124000 Manihot esculenta HOM05D005252 ORTHO05D006788 1.6e-98 364.4 572 39.7
SalBow5G4252 Salvia bowleyana HOM05D005252 ORTHO05D006788 1.7e-97 360.9 594 37.2
Peaxi162Scf00713g00214 Petunia axillaris HOM05D005252 ORTHO05D006788 9.5e-96 355.1 561 38.1
CiPaw.04G049400 Carya illinoinensis HOM05D005252 ORTHO05D006788 3.6e-95 353.2 447 44.1
HanXRQChr14g0443361 Helianthus annuus HOM05D005252 ORTHO05D006788 4.7e-95 352.8 596 35.9
Os07g0471100 Oryza sativa ssp. japonica HOM05D005252 ORTHO05D006788 8.9e-94 348.6 592 37.2
Thecc.04G057900 Theobroma cacao HOM05D005252 ORTHO05D006788 4.4e-93 346.3 448 42.9
ECA238G3559 Erigeron canadensis HOM05D005252 ORTHO05D006788 8.3e-92 342.0 587 37.6
FAN19G2162 Fragaria x ananassa HOM05D005252 ORTHO05D006788 2.4e-91 340.5 496 39.9
HPP92_025609 Vanilla planifolia HOM05D005252 ORTHO05D006788 1.0e-89 335.1 583 36.7
CsaV3_3G021090 Cucumis sativus L. HOM05D005252 ORTHO05D006788 5.6e-88 329.3 450 41.3
Sc20g0000830 Simmondsia chinensis HOM05D005252 ORTHO05D006788 8.1e-87 325.5 453 41.1
SHI24494 Sapria himalayana HOM05D005252 ORTHO05D006788 1.2e-85 321.6 738 33.3
Nitab4.5_0011448g0010 Nicotiana tabacum HOM05D005252 ORTHO05D006788 1.7e-84 317.8 585 34.7
Migut.K00975 Erythranthe guttata HOM05D005252 ORTHO05D006788 2.5e-80 303.9 584 35.1
AT5G17240 Arabidopsis thaliana HOM05D005252 ORTHO05D006788 3.3e-80 303.5 521 37.4
CAN.G1681.16 Capsicum annuum HOM05D005252 ORTHO05D006788 8.9e-78 295.4 517 35.0
arahy.Tifrunner.gnm1.ann1.P1K6DT Arachis hypogaea HOM05D005252 ORTHO05D006788 2.4e-75 287.3 421 38.5
Carub.0006s1543 Capsella rubella HOM05D005252 ORTHO05D006788 2.1e-74 284.3 440 39.3
SEGI_32636 Sequoiadendron giganteum HOM05D005252 ORTHO05D006788 4.3e-72 276.6 589 32.4
unitig_748.g8447 Utricularia gibba HOM05D001485 ORTHO05D001384 4.7e-71 273.1 553 36.0
DCAR_003402 Daucus carota HOM05D005252 ORTHO05D006788 1.9e-64 251.1 288 47.9
Pp3c1_22230 Physcomitrium patens HOM05D005252 ORTHO05D006788 1.1e-54 218.8 523 31.7
ATR0807G108 Amborella trichopoda HOM05D005252 ORTHO05D006788 2.0e-53 214.5 331 40.2
Glyma.02G240302 Glycine max HOM05D005252 ORTHO05D006788 1.7e-52 211.5 283 39.9
AagrBONN_evm.TU.Sc2ySwM_344.1683 Anthoceros agrestis HOM05D005252 ORTHO05D006788 2.3e-49 201.1 395 33.9
SMO244G0074 Selaginella moellendorffii HOM05D005252 ORTHO05D006788 8.7e-49 199.1 582 28.5
CDE04G0719 Ceratophyllum demersum HOM05D005252 ORTHO05D006788 1.6e-47 194.9 285 39.6
Nitab4.5_0009456g0010 Nicotiana tabacum HOM05D005252 ORTHO05D006788 1.1e-43 182.2 329 36.8
ATR0807G103 Amborella trichopoda HOM05D005252 ORTHO05D006788 1.3e-39 168.7 221 44.3
CDE04G0131 Ceratophyllum demersum HOM05D005252 ORTHO05D006788 4.8e-39 166.8 246 39.4
CBR_g38413 Chara braunii HOM05D005252 ORTHO05D006788 1.2e-37 162.2 479 30.5
TAR622G0830 Trochodendron aralioides HOM05D005252 ORTHO05D006788 5.5e-35 153.3 194 44.8
Psat6g212680 Pisum sativum HOM05D005252 ORTHO05D006788 2.4e-30 137.9 224 36.6
Mapoly0060s0114 Marchantia polymorpha HOM05D005252 ORTHO05D006788 2.2e-28 131.3 313 30.0
MELO3C020240.2 Cucumis melo HOM05D005252 ORTHO05D006788 2.9e-28 131.0 192 40.6
AagrBONN_evm.TU.Sc2ySwM_344.1689 Anthoceros agrestis HOM05D005252 ORTHO05D006788 2.7e-26 124.4 439 29.2
Mapoly0060s0113 Marchantia polymorpha HOM05D005252 ORTHO05D006788 1.7e-20 105.1 186 36.6
Cre10.g437829 Chlamydomonas reinhardtii HOM05D005252 ORTHO05D006788 1.2e-18 99.0 569 22.8
CSS0049209 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 3.6e-18 97.4 120 44.2
CSS0015528 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 6.1e-18 96.7 75 72.0
SEGI_29343 Sequoiadendron giganteum HOM05D005252 ORTHO05D006788 2.0e-16 91.7 100 51.0
BcaC03g18542 Brassica carinata HOM05D005252 ORTHO05D032136 5.0e-12 77.0 57 61.4
AagrBONN_evm.TU.Sc2ySwM_344.1682 Anthoceros agrestis HOM05D005252 ORTHO05D006788 2.1e-10 71.6 105 49.5
Oeu024984.1 Olea europaea HOM05D005252 ORTHO05D006788 2.3e-09 68.2 47 61.7
MCO06G238 Micromonas commoda HOM05D005252 ORTHO05D006788 6.8e-09 66.6 341 25.5
Gohir.A01G173232 Gossypium hirsutum HOM05D005252 ORTHO05D006788 5.7e-08 63.5 48 52.1
Gohir.A08G081162 Gossypium hirsutum HOM05D005252 ORTHO05D006788 1.3e-07 62.4 53 50.9
Gohir.A11G239440 Gossypium hirsutum HOM05D005252 ORTHO05D006788 1.3e-07 62.4 53 50.9
Gohir.A13G083166 Gossypium hirsutum HOM05D005252 ORTHO05D006788 1.3e-07 62.4 53 50.9
Gohir.A07G145950 Gossypium hirsutum HOM05D005252 ORTHO05D006788 1.7e-07 62.0 48 50.0
Gohir.A02G112713 Gossypium hirsutum HOM05D005252 ORTHO05D006788 3.7e-07 60.8 48 50.0
Gohir.A06G122900 Gossypium hirsutum HOM05D005252 ORTHO05D006788 6.3e-07 60.1 48 47.9


User provided reference genes

Program Settings