Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund22149 Selenicereus undatus HOM05D021542 ORTHO05D005178 1.0e-70 270.0 138 100.0
Hund11162 Selenicereus undatus HOM05D021542 ORTHO05D005178 2.3e-35 152.5 93 86.0
Hund04787 Selenicereus undatus HOM05D021542 ORTHO05D383482 2.8e-33 145.6 121 66.9
Hund03829 Selenicereus undatus HOM05D021542 ORTHO05D380881 3.5e-23 112.1 74 81.1
Hund27396 Selenicereus undatus HOM05D021542 ORTHO05D382545 1.7e-22 109.8 70 82.9
Hund25832 Selenicereus undatus HOM05D021542 ORTHO05D383034 2.5e-21 105.9 71 80.3
Hund05584 Selenicereus undatus HOM05D004459 ORTHO05D005178 7.8e-15 84.3 47 83.0
Hund18441 Selenicereus undatus HOM05D004459 ORTHO05D005178 2.3e-14 82.8 44 88.6
ClCG02G000030 Citrullus lanatus HOM05D004459 ORTHO05D005178 3.9e-14 82.0 55 72.7
Ah.08g214750 Amaranthus hybridus HOM05D004459 ORTHO05D005178 5.0e-14 81.6 52 75.0
CsaV3_2G019680 Cucumis sativus L. HOM05D004459 ORTHO05D005178 8.6e-14 80.9 51 76.5
MSTRG.17987 Avicennia marina HOM05D004459 ORTHO05D005178 1.1e-13 80.5 47 76.6
EL10Ac5g11649 Beta vulgaris HOM05D004459 ORTHO05D005178 1.5e-13 80.1 57 64.9
EL10Ac7g17932 Beta vulgaris HOM05D004459 ORTHO05D005178 1.5e-13 80.1 57 64.9
Sed0021622 Sechium edule HOM05D004459 ORTHO05D005178 1.9e-13 79.7 51 74.5
Manes.13G050900 Manihot esculenta HOM05D004459 ORTHO05D005178 4.3e-13 78.6 47 74.5
Nitab4.5_0000403g0040 Nicotiana tabacum HOM05D004459 ORTHO05D005178 4.3e-13 78.6 47 72.3
Dinv14524 Davidia involucrata HOM05D004459 ORTHO05D005178 5.6e-13 78.2 47 74.5
CSS0012359 Camellia sinensis var. sinensis HOM05D004459 ORTHO05D005178 7.3e-13 77.8 47 74.5
MSTRG.20974 Avicennia marina HOM05D004459 ORTHO05D005178 9.5e-13 77.4 47 72.3
Cc01_g16560 Coffea canephora HOM05D004459 ORTHO05D005178 9.5e-13 77.4 47 72.3
MD10G1158300 Malus domestica HOM05D004459 ORTHO05D005178 9.5e-13 77.4 47 74.5
Aqoxy2G03940 Aquilegia oxysepala HOM05D004459 ORTHO05D005178 1.2e-12 77.0 47 76.6
Lsat_1_v5_gn_5_177641 Lactuca sativa HOM05D004459 ORTHO05D005178 1.2e-12 77.0 47 72.3
Ciclev10021820m.g Citrus clementina HOM05D004459 ORTHO05D005178 1.6e-12 76.6 47 72.3
THA.LOC104818977 Tarenaya hassleriana HOM05D004459 ORTHO05D005178 1.6e-12 76.6 47 74.5
Thecc.01G217400 Theobroma cacao HOM05D004459 ORTHO05D005178 1.6e-12 76.6 51 68.6
vmacro14724 Vaccinium macrocarpon HOM05D004459 ORTHO05D005178 1.6e-12 76.6 47 72.3
Atru.chr6.1442 Acer truncatum HOM05D004459 ORTHO05D005178 2.8e-12 75.9 47 74.5
COL.COLO4_16102 Corchorus olitorius HOM05D004459 ORTHO05D005178 2.8e-12 75.9 51 70.6
Nn3g20066 Nelumbo nucifera HOM05D004459 ORTHO05D005178 2.8e-12 75.9 47 74.5
MD10G1157700 Malus domestica HOM05D004459 ORTHO05D005178 3.6e-12 75.5 47 72.3
Cfa021481 Carpinus fangiana HOM05D004459 ORTHO05D005178 4.7e-12 75.1 47 72.3
AUR62016530 Chenopodium quinoa HOM05D004459 ORTHO05D005178 4.7e-12 75.1 47 70.2
Thhalv10004814m.g Eutrema salsugineum HOM05D004459 ORTHO05D005178 4.7e-12 75.1 51 66.7
Gohir.A11G140100 Gossypium hirsutum HOM05D004459 ORTHO05D005178 4.7e-12 75.1 51 68.6
Gohir.D11G146500 Gossypium hirsutum HOM05D004459 ORTHO05D005178 4.7e-12 75.1 51 68.6
Gorai.007G156900 Gossypium raimondii HOM05D004459 ORTHO05D005178 4.7e-12 75.1 51 68.6
GSVIVG01006388001 Vitis vinifera HOM05D004459 ORTHO05D005178 4.7e-12 75.1 47 70.2
AL8G21660 Arabidopsis lyrata HOM05D004459 ORTHO05D005178 6.2e-12 74.7 51 66.7
CiPaw.14G040200 Carya illinoinensis HOM05D004459 ORTHO05D005178 6.2e-12 74.7 51 68.6
PGR083G1823 Punica granatum HOM05D004459 ORTHO05D005178 6.2e-12 74.7 47 70.2
unitig_0.g407 Utricularia gibba HOM05D004459 ORTHO05D005178 6.2e-12 74.7 47 72.3
Glyma.08G347600 Glycine max HOM05D004459 ORTHO05D005178 8.1e-12 74.3 51 66.7
THA.LOC104822487 Tarenaya hassleriana HOM05D004459 ORTHO05D005178 8.1e-12 74.3 47 70.2
arahy.Tifrunner.gnm1.ann1.J5WB5S Arachis hypogaea HOM05D004459 ORTHO05D005178 1.1e-11 73.9 51 64.7
Nitab4.5_0002671g0020 Nicotiana tabacum HOM05D004459 ORTHO05D005178 1.1e-11 73.9 47 70.2
Nitab4.5_0005866g0010 Nicotiana tabacum HOM05D004459 ORTHO05D005178 1.1e-11 73.9 47 68.1
Peaxi162Scf00487g00620 Petunia axillaris HOM05D004459 ORTHO05D005178 1.1e-11 73.9 47 66.0
Actinidia23765 Actinidia chinensis HOM05D004459 ORTHO05D005178 1.4e-11 73.6 47 70.2
Aa31LG6G9700 Aethionema arabicum HOM05D004459 ORTHO05D005178 1.4e-11 73.6 51 64.7
AT5G48640 Arabidopsis thaliana HOM05D004459 ORTHO05D005178 1.4e-11 73.6 51 64.7
Migut.D02511 Erythranthe guttata HOM05D004459 ORTHO05D005178 1.8e-11 73.2 47 66.0
FvH4_2g18390 Fragaria vesca HOM05D004459 ORTHO05D005178 1.8e-11 73.2 47 70.2
FAN15G2342 Fragaria x ananassa HOM05D004459 ORTHO05D005178 1.8e-11 73.2 47 70.2
FAN27G2700 Fragaria x ananassa HOM05D004459 ORTHO05D005178 1.8e-11 73.2 47 70.2
Phvul.008G132450 Phaseolus vulgaris HOM05D004459 ORTHO05D005178 1.8e-11 73.2 51 64.7
QL02p059745 Quercus lobata HOM05D004459 ORTHO05D005178 1.8e-11 73.2 47 68.1
QL02p059784 Quercus lobata HOM05D004459 ORTHO05D005178 1.8e-11 73.2 47 68.1
Sabra02G0187900 Salix brachista HOM05D004459 ORTHO05D005178 1.8e-11 73.2 56 62.5
Haze_03347 Corylus avellana HOM05D004459 ORTHO05D005178 2.3e-11 72.8 47 70.2
Glyma.18G159000 Glycine max HOM05D004459 ORTHO05D005178 3.1e-11 72.4 51 64.7
HanXRQChr01g0015361 Helianthus annuus HOM05D004459 ORTHO05D005178 3.1e-11 72.4 47 66.0
RcHm_v2.0_Chr6g0283781 Rosa chinensis HOM05D004459 ORTHO05D005178 3.1e-11 72.4 47 68.1
THA.LOC104822488 Tarenaya hassleriana HOM05D004459 ORTHO05D005178 3.1e-11 72.4 47 70.2
A06p39040 Brassica napus HOM05D004459 ORTHO05D005178 4.0e-11 72.0 51 66.7
Duzib138G0860 Durio zibethinus HOM05D004459 ORTHO05D005178 4.0e-11 72.0 51 66.7
Gohir.A07G092400 Gossypium hirsutum HOM05D004459 ORTHO05D005178 4.0e-11 72.0 51 64.7
Gohir.D07G096900 Gossypium hirsutum HOM05D004459 ORTHO05D005178 4.0e-11 72.0 51 64.7
Gorai.001G104300 Gossypium raimondii HOM05D004459 ORTHO05D005178 4.0e-11 72.0 51 64.7
Lj1g0001756 Lotus japonicus HOM05D004459 ORTHO05D005178 4.0e-11 72.0 51 62.7
Nitab4.5_0003020g0110 Nicotiana tabacum HOM05D004459 ORTHO05D005178 4.0e-11 72.0 47 68.1
Phvul.007G143100 Phaseolus vulgaris HOM05D004459 ORTHO05D005178 4.0e-11 72.0 51 62.7
Psat3g149520 Pisum sativum HOM05D004459 ORTHO05D005178 4.0e-11 72.0 51 62.7
CiPaw.13G050600 Carya illinoinensis HOM05D004459 ORTHO05D005178 5.2e-11 71.6 54 61.1
Lalb_Chr19g0125891 Lupinus albus HOM05D004459 ORTHO05D005178 5.2e-11 71.6 51 62.7
BcaB07g30038 Brassica carinata HOM05D004459 ORTHO05D005178 6.8e-11 71.2 51 64.7
BcaC03g17668 Brassica carinata HOM05D004459 ORTHO05D005178 6.8e-11 71.2 51 64.7
A02p37660 Brassica napus HOM05D004459 ORTHO05D005178 6.8e-11 71.2 51 64.7
SalBow6G5468 Salvia bowleyana HOM05D004459 ORTHO05D005178 6.8e-11 71.2 51 64.7
Solyc06g083260.3 Solanum lycopersicum HOM05D004459 ORTHO05D005178 6.8e-11 71.2 47 68.1
Sopen06g034640 Solanum pennellii HOM05D004459 ORTHO05D005178 6.8e-11 71.2 47 68.1
PGSC0003DMG401020104 Solanum tuberosum HOM05D004459 ORTHO05D005178 6.8e-11 71.2 47 68.1
Actinidia09461 Actinidia chinensis HOM05D004459 ORTHO05D005178 8.9e-11 70.9 47 68.1
Hma1.2p1_0149F.1_g066510 Hydrangea macrophylla HOM05D004459 ORTHO05D005178 8.9e-11 70.9 46 67.4
Zm00001eb317580 Zea mays HOM05D004459 ORTHO05D005178 8.9e-11 70.9 45 68.9
BraA06t26817Z Brassica rapa HOM05D004459 ORTHO05D005178 1.2e-10 70.5 51 64.7
CANSAT01G2987 Cannabis sativa HOM05D004459 ORTHO05D005178 1.2e-10 70.5 47 63.8
Carub.0008s0831 Capsella rubella HOM05D004459 ORTHO05D005178 1.2e-10 70.5 51 62.7
HanXRQChr04g0108291 Helianthus annuus HOM05D004459 ORTHO05D005178 1.2e-10 70.5 47 66.0
Lj2A1122G39 Lonicera japonica HOM05D004459 ORTHO05D005178 1.2e-10 70.5 47 66.0
Lalb_Chr01g0022191 Lupinus albus HOM05D004459 ORTHO05D005178 1.2e-10 70.5 51 60.8
Prupe.8G196700 Prunus persica HOM05D004459 ORTHO05D005178 1.2e-10 70.5 47 68.1
SHI14518 Sapria himalayana HOM05D004459 ORTHO05D005178 1.2e-10 70.5 47 63.8
BcaC06g30774 Brassica carinata HOM05D004459 ORTHO05D005178 1.5e-10 70.1 51 64.7
A02p37650 Brassica napus HOM05D004459 ORTHO05D005178 1.5e-10 70.1 47 63.8
C07p39300 Brassica napus HOM05D004459 ORTHO05D005178 1.5e-10 70.1 51 64.7
BolC7t44450H Brassica oleracea HOM05D004459 ORTHO05D005178 1.5e-10 70.1 51 64.7
FAN24G3552 Fragaria x ananassa HOM05D004459 ORTHO05D005178 1.5e-10 70.1 46 69.6
Potri.014G194900 Populus trichocarpa HOM05D004459 ORTHO05D005178 1.5e-10 70.1 47 68.1
TWI36G0336 Tripterygium wilfordii HOM05D004459 ORTHO05D005178 1.5e-10 70.1 47 66.0
PSO017G6853 Papaver somniferum HOM05D004459 ORTHO05D005178 2.0e-10 69.7 47 66.0
Sp2g19020 Schrenkiella parvula HOM05D004459 ORTHO05D005178 2.0e-10 69.7 51 62.7
C02p56750 Brassica napus HOM05D004459 ORTHO05D005178 2.6e-10 69.3 51 62.7
BolC2t11743H Brassica oleracea HOM05D004459 ORTHO05D005178 2.6e-10 69.3 51 62.7
CARHR183330 Cardamine hirsuta HOM05D004459 ORTHO05D005178 2.6e-10 69.3 47 63.8
CDE11G0402 Ceratophyllum demersum HOM05D004459 ORTHO05D005178 2.6e-10 69.3 51 66.7
BcaC03g17667 Brassica carinata HOM05D004459 ORTHO05D005178 3.4e-10 68.9 47 61.7
C02p56740 Brassica napus HOM05D004459 ORTHO05D005178 3.4e-10 68.9 47 61.7
BolC2t11742H Brassica oleracea HOM05D004459 ORTHO05D005178 3.4e-10 68.9 47 61.7
Thhalv10004803m.g Eutrema salsugineum HOM05D004459 ORTHO05D005178 3.4e-10 68.9 47 61.7
PSO063G5689 Papaver somniferum HOM05D004459 ORTHO05D005178 4.4e-10 68.6 47 63.8
AL8G21650 Arabidopsis lyrata HOM05D004459 ORTHO05D005178 5.8e-10 68.2 47 61.7
AT5G48630 Arabidopsis thaliana HOM05D004459 ORTHO05D005178 5.8e-10 68.2 47 61.7
Potri.002G246800 Populus trichocarpa HOM05D004459 ORTHO05D005178 5.8e-10 68.2 44 72.7
Sp2g19010 Schrenkiella parvula HOM05D004459 ORTHO05D005178 5.8e-10 68.2 47 61.7
SEGI_10334 Sequoiadendron giganteum HOM05D004459 ORTHO05D005178 5.8e-10 68.2 45 66.7
BcaB07g30037 Brassica carinata HOM05D004459 ORTHO05D005178 7.5e-10 67.8 47 59.6
ECA248G3763 Erigeron canadensis HOM05D004459 ORTHO05D005178 7.5e-10 67.8 47 59.6
Medtr7g055650 Medicago truncatula HOM05D004459 ORTHO05D005178 1.7e-09 66.6 51 60.8
TAR365G0904 Trochodendron aralioides HOM05D004459 ORTHO05D005178 1.7e-09 66.6 47 61.7
Pp3c24_1910 Physcomitrium patens HOM05D004459 ORTHO05D005178 2.2e-09 66.2 47 63.8
DCAR_000515 Daucus carota HOM05D004459 ORTHO05D005178 2.9e-09 65.9 47 63.8
Os09g0504400 Oryza sativa ssp. japonica HOM05D004459 ORTHO05D005178 3.7e-09 65.5 45 64.4
ATR0561G002 Amborella trichopoda HOM05D004459 ORTHO05D005178 4.9e-09 65.1 47 57.4
SMO147G0024 Selaginella moellendorffii HOM05D004459 ORTHO05D005178 1.9e-08 63.2 47 57.4
Mapoly0005s0080 Marchantia polymorpha HOM05D004459 ORTHO05D005178 2.4e-08 62.8 47 59.6
HPP92_001407 Vanilla planifolia HOM05D004459 ORTHO05D005178 4.1e-08 62.0 47 57.4
AagrBONN_evm.TU.Sc2ySwM_344.4413 Anthoceros agrestis HOM05D004459 ORTHO05D005178 3.5e-07 58.9 47 57.4
unitig_60.g25580 Utricularia gibba HOM05D000036 ORTHO05D001038 2.3e-06 56.2 36 69.4
BraA02t08747Z Brassica rapa HOM05D004459 ORTHO05D005178 3.0e-06 55.8 39 64.1
AUR62001146 Chenopodium quinoa HOM05D004459 ORTHO05D005178 5.1e-06 55.1 33 72.7
CAN.G874.13 Capsicum annuum HOM05D004459 ORTHO05D005178 8.6e-06 54.3 36 63.9


User provided reference genes

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