Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund22148 Selenicereus undatus HOM05D006391 ORTHO05D007767 3.3e-219 765.0 467 100.0
EL10Ac4g09055 Beta vulgaris HOM05D006391 ORTHO05D007767 2.4e-140 503.1 408 69.4
AUR62004876 Chenopodium quinoa HOM05D006391 ORTHO05D007767 5.8e-139 498.4 411 66.9
AUR62037609 Chenopodium quinoa HOM05D006391 ORTHO05D007767 2.1e-136 490.0 411 66.7
Sc09g0004120 Simmondsia chinensis HOM05D006391 ORTHO05D007767 8.7e-135 484.6 348 73.9
AUR62001083 Chenopodium quinoa HOM05D006391 ORTHO05D007767 9.0e-132 474.6 435 62.8
Actinidia06783 Actinidia chinensis HOM05D006391 ORTHO05D007767 1.2e-120 437.6 348 68.7
Atru.chr2.892 Acer truncatum HOM05D006391 ORTHO05D007767 3.0e-119 433.0 349 68.8
CANSAT54G0018 Cannabis sativa HOM05D006391 ORTHO05D007767 3.9e-119 432.6 346 69.1
Gohir.A11G251400 Gossypium hirsutum HOM05D006391 ORTHO05D007767 3.9e-119 432.6 348 67.0
Potri.013G044600 Populus trichocarpa HOM05D006391 ORTHO05D007767 8.8e-119 431.4 356 67.1
Lj2A39G66 Lonicera japonica HOM05D006391 ORTHO05D007767 2.0e-118 430.3 350 68.6
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 2.6e-118 429.9 348 66.7
Cfa006327 Carpinus fangiana HOM05D006391 ORTHO05D007767 1.3e-117 427.6 347 68.6
PGR004G0019 Punica granatum HOM05D006391 ORTHO05D007767 1.3e-117 427.6 348 65.5
Gorai.007G280500 Gossypium raimondii HOM05D006391 ORTHO05D007767 1.7e-117 427.2 348 66.4
Prupe.6G348300 Prunus persica HOM05D006391 ORTHO05D007767 2.8e-117 426.4 349 67.0
Eucgr.H04256 Eucalyptus grandis HOM05D006391 ORTHO05D007767 3.7e-117 426.0 349 68.5
Duzib177G0389 Durio zibethinus HOM05D006391 ORTHO05D007767 6.3e-117 425.2 346 66.8
Dinv14621 Davidia involucrata HOM05D006391 ORTHO05D007767 1.1e-116 424.5 348 68.1
COL.COLO4_15424 Corchorus olitorius HOM05D006391 ORTHO05D007767 1.8e-116 423.7 355 66.5
Gohir.D11G261800 Gossypium hirsutum HOM05D006391 ORTHO05D007767 3.1e-116 422.9 348 66.1
Manes.08G137500 Manihot esculenta HOM05D006391 ORTHO05D007767 4.1e-116 422.5 357 66.4
CiPaw.07G078100 Carya illinoinensis HOM05D006391 ORTHO05D007767 7.0e-116 421.8 347 67.4
GSVIVG01036208001 Vitis vinifera HOM05D006391 ORTHO05D007767 7.0e-116 421.8 349 66.2
Ca_10006_v3 Cicer arietinum L. HOM05D006391 ORTHO05D007767 9.1e-116 421.4 348 66.4
Nn1g02693 Nelumbo nucifera HOM05D006391 ORTHO05D007767 2.0e-115 420.2 351 65.0
Thecc.05G276300 Theobroma cacao HOM05D006391 ORTHO05D007767 2.6e-115 419.9 352 66.8
Ah.04g163310 Amaranthus hybridus HOM05D006391 ORTHO05D007767 5.9e-115 418.7 344 69.5
Cc02_g09040 Coffea canephora HOM05D006391 ORTHO05D007767 5.9e-115 418.7 358 65.4
Glyma.20G222100 Glycine max HOM05D006391 ORTHO05D007767 7.7e-115 418.3 347 66.3
Glyma.10G167000 Glycine max HOM05D006391 ORTHO05D007767 1.7e-114 417.2 347 66.9
MD12G1245500 Malus domestica HOM05D006391 ORTHO05D007767 1.7e-114 417.2 347 66.6
Lsat_1_v5_gn_8_2721 Lactuca sativa HOM05D006391 ORTHO05D007767 3.8e-114 416.0 351 65.0
Medtr1g079830 Medicago truncatula HOM05D006391 ORTHO05D007767 3.8e-114 416.0 349 65.9
Peaxi162Scf00120g00213 Petunia axillaris HOM05D006391 ORTHO05D007767 5.0e-114 415.6 353 65.7
TPR.G10279 Trifolium pratense HOM05D006391 ORTHO05D007767 8.5e-114 414.8 349 65.6
Lj5g0002062 Lotus japonicus HOM05D006391 ORTHO05D007767 1.5e-113 414.1 349 65.3
ECA233G2464 Erigeron canadensis HOM05D006391 ORTHO05D007767 1.9e-113 413.7 352 65.1
Sabra13G0041000 Salix brachista HOM05D006391 ORTHO05D007767 1.9e-113 413.7 357 65.5
Nitab4.5_0000856g0160 Nicotiana tabacum HOM05D006391 ORTHO05D007767 2.5e-113 413.3 350 65.7
Solyc11g006080.2 Solanum lycopersicum HOM05D006391 ORTHO05D007767 2.5e-113 413.3 350 66.0
PGSC0003DMG400028690 Solanum tuberosum HOM05D006391 ORTHO05D007767 3.2e-113 412.9 350 65.7
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea HOM05D006391 ORTHO05D007767 4.2e-113 412.5 347 64.6
Sopen11g002020 Solanum pennellii HOM05D006391 ORTHO05D007767 5.5e-113 412.1 350 66.0
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea HOM05D006391 ORTHO05D007767 2.1e-112 410.2 347 64.8
TWI56G1126 Tripterygium wilfordii HOM05D006391 ORTHO05D007767 8.0e-112 408.3 348 64.4
VMungo0720G1212 Vigna mungo HOM05D006391 ORTHO05D007767 8.0e-112 408.3 338 66.3
Ciclev10020524m.g Citrus clementina HOM05D006391 ORTHO05D007767 3.0e-111 406.4 347 64.8
Phvul.L001863 Phaseolus vulgaris HOM05D006391 ORTHO05D007767 3.0e-111 406.4 340 64.7
Nitab4.5_0004928g0020 Nicotiana tabacum HOM05D006391 ORTHO05D007767 4.0e-111 406.0 355 63.9
QL03p031977 Quercus lobata HOM05D006391 ORTHO05D007767 1.5e-110 404.1 350 64.9
HanXRQChr08g0225371 Helianthus annuus HOM05D006391 ORTHO05D007767 4.4e-110 402.5 347 64.6
Lalb_Chr21g0311261 Lupinus albus HOM05D006391 ORTHO05D007767 5.7e-110 402.1 349 63.0
CAN.G582.18 Capsicum annuum HOM05D006391 ORTHO05D007767 7.4e-110 401.7 345 65.5
SalBow3G3308 Salvia bowleyana HOM05D006391 ORTHO05D007767 9.7e-110 401.4 350 63.4
AT3G04560 Arabidopsis thaliana HOM05D006391 ORTHO05D007767 8.2e-109 398.3 370 60.8
DCAR_028379 Daucus carota HOM05D006391 ORTHO05D007767 8.2e-109 398.3 330 67.3
MBI17_g17506_MAGBIO Magnolia biondii HOM05D006391 ORTHO05D007767 1.4e-108 397.5 354 62.4
AL3G14580 Arabidopsis lyrata HOM05D006391 ORTHO05D007767 2.4e-108 396.7 366 61.2
Aqoxy5G00275 Aquilegia oxysepala HOM05D006391 ORTHO05D007767 4.1e-108 396.0 350 62.0
vmacro20003 Vaccinium macrocarpon HOM05D006391 ORTHO05D007767 2.0e-107 393.7 370 61.1
CsaV3_1G045530 Cucumis sativus L. HOM05D006391 ORTHO05D007767 5.9e-107 392.1 353 62.9
CSS0020771 Camellia sinensis var. sinensis HOM05D006391 ORTHO05D007767 1.1e-105 387.9 344 64.5
Aa31LG5G14980 Aethionema arabicum HOM05D006391 ORTHO05D007767 1.5e-105 387.5 378 58.2
BcaC05g30188 Brassica carinata HOM05D006391 ORTHO05D007767 2.5e-105 386.7 367 59.1
Carub.0003s0371 Capsella rubella HOM05D006391 ORTHO05D007767 7.2e-105 385.2 374 59.4
FAN05G1344 Fragaria x ananassa HOM05D006391 ORTHO05D007767 3.6e-104 382.9 365 59.7
FAN05G3173 Fragaria x ananassa HOM05D006391 ORTHO05D007767 4.7e-104 382.5 365 59.5
Haze_04461 Corylus avellana HOM05D006391 ORTHO05D007767 8.0e-104 381.7 459 51.9
Migut.F00812 Erythranthe guttata HOM05D006391 ORTHO05D007767 3.0e-103 379.8 342 61.4
RcHm_v2.0_Chr3g0450061 Rosa chinensis HOM05D006391 ORTHO05D007767 4.0e-103 379.4 365 59.7
Thhalv10020805m.g Eutrema salsugineum HOM05D006391 ORTHO05D007767 5.2e-103 379.0 375 57.9
FAN09G3726 Fragaria x ananassa HOM05D006391 ORTHO05D007767 5.2e-103 379.0 365 58.9
Rhsim05G0175400 Rhododendron simsii HOM05D006391 ORTHO05D007767 5.2e-103 379.0 411 56.2
ATR0680G180 Amborella trichopoda HOM05D006391 ORTHO05D007767 6.8e-103 378.6 348 60.6
PSO210G7203 Papaver somniferum HOM05D006391 ORTHO05D007767 6.8e-103 378.6 349 60.2
PSO832G3851 Papaver somniferum HOM05D006391 ORTHO05D007767 1.5e-102 377.5 349 59.6
BolC5t34924H Brassica oleracea HOM05D006391 ORTHO05D007767 2.6e-102 376.7 369 57.5
FAN02G0817 Fragaria x ananassa HOM05D006391 ORTHO05D007767 5.7e-102 375.6 365 58.9
MELO3C024661.2 Cucumis melo HOM05D006391 ORTHO05D007767 7.5e-102 375.2 385 58.7
ClCG06G009350 Citrullus lanatus HOM05D006391 ORTHO05D007767 1.3e-101 374.4 329 63.5
CARHR078730 Cardamine hirsuta HOM05D006391 ORTHO05D007767 1.7e-101 374.0 379 57.3
BraA05t23038Z Brassica rapa HOM05D006391 ORTHO05D007767 6.3e-101 372.1 333 62.2
THA.LOC104827288 Tarenaya hassleriana HOM05D006391 ORTHO05D007767 1.1e-100 371.3 373 56.3
unitig_32.g11831 Utricularia gibba HOM05D006391 ORTHO05D007767 4.5e-99 365.9 327 60.6
Sp3g03400 Schrenkiella parvula HOM05D006391 ORTHO05D007767 1.0e-98 364.8 381 55.9
Sed0026137 Sechium edule HOM05D006391 ORTHO05D007767 8.5e-98 361.7 356 59.8
FAN14G3605 Fragaria x ananassa HOM05D006391 ORTHO05D007767 3.2e-97 359.8 365 57.8
C05p62710 Brassica napus HOM05D006391 ORTHO05D007767 5.5e-97 359.0 307 62.9
BcaC05g29933 Brassica carinata HOM05D006391 ORTHO05D007767 7.2e-97 358.6 307 62.9
A05p42930 Brassica napus HOM05D006391 ORTHO05D007767 2.1e-96 357.1 307 63.2
FvH4_6g02310 Fragaria vesca HOM05D006391 ORTHO05D007767 6.1e-96 355.5 365 57.5
FAN14G5548 Fragaria x ananassa HOM05D006391 ORTHO05D007767 8.0e-96 355.1 365 57.3
Os02g0820600 Oryza sativa ssp. japonica HOM05D006391 ORTHO05D007767 5.7e-94 349.0 367 54.0
Sed0020342 Sechium edule HOM05D006391 ORTHO05D007767 5.7e-94 349.0 344 58.7
Sed0023982 Sechium edule HOM05D006391 ORTHO05D007767 3.5e-91 339.7 352 58.8
Zm00001eb259140 Zea mays HOM05D006391 ORTHO05D007767 1.3e-90 337.8 319 59.2
SGA_v2.0_scaffold243G44310 Striga asiatica HOM05D006391 ORTHO05D007767 2.5e-89 333.6 354 55.4
SEGI_17356 Sequoiadendron giganteum HOM05D006391 ORTHO05D007767 6.4e-85 318.9 329 53.8
CDE04G1237 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 6.6e-82 308.9 308 58.4
Cpa.g.sc162.14 Carica papaya HOM05D006391 ORTHO05D007767 5.2e-79 299.3 275 61.8
MD04G1228400 Malus domestica HOM05D006391 ORTHO05D007767 1.6e-75 287.7 261 60.9
Psat6g143040 Pisum sativum HOM05D006391 ORTHO05D007767 3.5e-75 286.6 265 61.5
Pp3c19_8680 Physcomitrium patens HOM05D006391 ORTHO05D007767 1.2e-72 278.1 337 48.1
SMO203G0061 Selaginella moellendorffii HOM05D006391 ORTHO05D007767 1.8e-71 274.2 323 50.2
HPP92_007146 Vanilla planifolia HOM05D006391 ORTHO05D007767 4.4e-70 269.6 261 56.3
Mapoly0044s0074 Marchantia polymorpha HOM05D006391 ORTHO05D007767 1.1e-65 255.0 358 43.6
HPP92_007142 Vanilla planifolia HOM05D006391 ORTHO05D007767 8.9e-63 245.4 247 56.7
Oeu034581.1 Olea europaea HOM05D006391 ORTHO05D007767 4.0e-55 219.9 208 62.5
CBR_g8309 Chara braunii HOM05D006391 ORTHO05D007767 8.4e-53 212.2 367 40.3
QL03p032009 Quercus lobata HOM05D006391 ORTHO05D007767 7.4e-41 172.6 123 72.4
Oeu058337.1 Olea europaea HOM05D006391 ORTHO05D007767 1.8e-39 167.9 135 63.7
SHI23187 Sapria himalayana HOM05D006391 ORTHO05D007767 2.4e-39 167.5 151 58.9
HPP92_007141 Vanilla planifolia HOM05D006391 ORTHO05D007767 7.1e-28 129.4 80 77.5
MCO07G609 Micromonas commoda HOM05D006391 ORTHO05D007767 2.8e-24 117.5 313 28.8
BcaB04g19320 Brassica carinata HOM05D006391 ORTHO05D007767 2.2e-16 91.3 86 59.3
MD04G1228300 Malus domestica HOM05D006391 ORTHO05D007767 2.6e-14 84.3 68 70.6
Cre02.g105450 Chlamydomonas reinhardtii HOM05D006391 ORTHO05D007767 2.1e-11 74.7 277 28.2
BcaC02g11594 Brassica carinata HOM05D006391 ORTHO05D007767 1.8e-10 71.6 66 56.1
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 2.0e-09 68.2 46 67.4
PRCOL_00004538 Prasinoderma coloniale HOM05D006391 ORTHO05D007767 2.8e-08 64.3 315 23.8
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 1.1e-07 62.4 98 38.8


User provided reference genes

Program Settings