Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 6.9e-102 374.0 195 100.0
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 7.1e-38 161.4 116 75.9
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 3.5e-37 159.1 129 69.8
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 6.6e-36 154.8 128 68.0
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.9e-35 153.3 125 70.4
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 7.3e-35 151.4 127 62.2
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 2.8e-34 149.4 123 69.9
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 1.1e-27 127.5 129 58.1
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 1.5e-27 127.1 124 58.1
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 9.6e-27 124.4 112 59.8
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 1.6e-26 123.6 129 53.5
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 1.1e-25 120.9 123 56.1
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.1e-25 120.9 124 57.3
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 1.1e-25 120.9 124 57.3
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 1.8e-25 120.2 124 55.6
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 1.8e-25 120.2 132 53.8
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 4.0e-25 119.0 127 52.8
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 7.6e-24 114.8 127 48.8
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 9.9e-24 114.4 97 58.8
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 9.9e-24 114.4 160 43.1
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 1.3e-23 114.0 114 55.3
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.3e-23 114.0 124 53.2
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 1.3e-23 114.0 132 53.8
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 1.7e-23 113.6 119 55.5
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 1.7e-23 113.6 106 57.5
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 2.9e-23 112.8 128 50.8
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 6.4e-23 111.7 117 55.6
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 6.4e-23 111.7 124 54.8
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 1.4e-22 110.5 129 45.7
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 1.4e-22 110.5 125 56.0
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 1.4e-22 110.5 120 53.3
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 1.4e-22 110.5 131 50.4
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 2.4e-22 109.8 134 50.7
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 3.2e-22 109.4 127 52.8
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 3.2e-22 109.4 126 52.4
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 5.4e-22 108.6 128 50.8
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 9.3e-22 107.8 120 52.5
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 9.3e-22 107.8 108 54.6
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 1.2e-21 107.5 110 54.5
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 2.1e-21 106.7 121 47.9
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 2.1e-21 106.7 134 44.8
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 2.1e-21 106.7 120 53.3
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 2.7e-21 106.3 120 53.3
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 2.7e-21 106.3 97 55.7
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 2.7e-21 106.3 122 51.6
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 3.5e-21 105.9 133 44.4
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 4.6e-21 105.5 93 59.1
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 4.6e-21 105.5 121 54.5
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 6.0e-21 105.1 118 53.4
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 7.9e-21 104.8 117 48.7
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 7.9e-21 104.8 126 49.2
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 7.9e-21 104.8 125 50.4
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 1.0e-20 104.4 112 51.8
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 1.0e-20 104.4 129 46.5
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.0e-20 104.4 122 49.2
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 1.3e-20 104.0 126 50.8
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 1.3e-20 104.0 98 55.1
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.3e-20 104.0 98 54.1
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.8e-20 103.6 87 63.2
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 2.3e-20 103.2 121 50.4
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 3.0e-20 102.8 115 51.3
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 3.0e-20 102.8 118 47.5
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 3.0e-20 102.8 100 51.0
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 3.0e-20 102.8 125 50.4
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 3.9e-20 102.4 123 48.8
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 5.1e-20 102.1 136 45.6
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 5.1e-20 102.1 120 49.2
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 5.1e-20 102.1 125 50.4
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 8.7e-20 101.3 123 48.0
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 8.7e-20 101.3 125 48.8
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 8.7e-20 101.3 130 50.8
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 8.7e-20 101.3 124 47.6
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 8.7e-20 101.3 129 48.8
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 1.1e-19 100.9 128 47.7
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.1e-19 100.9 87 62.1
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 1.1e-19 100.9 129 43.4
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 1.1e-19 100.9 123 47.2
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 1.9e-19 100.1 112 51.8
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 1.9e-19 100.1 125 49.6
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 2.5e-19 99.8 89 59.6
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 3.3e-19 99.4 123 46.3
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 4.3e-19 99.0 120 42.5
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 4.3e-19 99.0 124 50.0
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 5.6e-19 98.6 129 46.5
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 5.6e-19 98.6 123 44.7
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 7.4e-19 98.2 120 42.5
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 7.4e-19 98.2 120 42.5
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 7.4e-19 98.2 125 47.2
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 7.4e-19 98.2 124 49.2
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 9.6e-19 97.8 123 47.2
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 9.6e-19 97.8 123 47.2
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 9.6e-19 97.8 120 42.5
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 9.6e-19 97.8 120 42.5
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 9.6e-19 97.8 120 42.5
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 2.8e-18 96.3 127 44.9
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 4.8e-18 95.5 124 50.0
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 4.8e-18 95.5 96 46.9
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 6.2e-18 95.1 123 45.5
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 6.2e-18 95.1 123 45.5
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 6.2e-18 95.1 128 46.1
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 6.2e-18 95.1 126 44.4
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 8.1e-18 94.7 87 54.0
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 1.1e-17 94.4 124 50.0
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 1.8e-17 93.6 88 52.3
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 3.1e-17 92.8 82 56.1
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 3.1e-17 92.8 137 40.9
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 6.9e-17 91.7 72 66.7
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 1.2e-16 90.9 122 47.5
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 1.3e-15 87.4 89 50.6
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 1.3e-15 87.4 125 40.8
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 8.4e-15 84.7 107 46.7
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 1.4e-14 84.0 139 42.4
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 1.9e-14 83.6 85 48.2
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 5.5e-14 82.0 118 43.2
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 1.9e-11 73.6 68 54.4
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 1.3e-10 70.9 115 36.5
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.3e-10 70.9 68 55.9
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 1.6e-10 70.5 117 41.0
Ah.15g097910 Amaranthus hybridus HOM05D012832 ORTHO05D019522 4.8e-10 68.9 45 75.6
Ah.15g098350 Amaranthus hybridus HOM05D012832 ORTHO05D019522 4.8e-10 68.9 45 75.6
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 1.8e-09 67.0 80 43.8
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 1.8e-09 67.0 110 39.1
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 1.2e-08 64.3 89 38.2
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 2.6e-08 63.2 90 36.7
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 1.7e-07 60.5 139 33.1
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 6.5e-07 58.5 46 60.9
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 6.5e-07 58.5 93 37.6


User provided reference genes

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