Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 3.6e-32 141.0 70 100.0
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 5.5e-25 117.1 67 80.6
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 1.2e-24 115.9 70 81.4
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 1.0e-23 112.8 67 79.1
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 1.0e-23 112.8 68 72.1
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 1.8e-23 112.1 69 79.7
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 2.3e-23 111.7 72 76.4
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 2.3e-23 111.7 69 79.7
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 3.0e-23 111.3 68 79.4
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 5.1e-23 110.5 69 78.3
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 5.1e-23 110.5 69 78.3
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 1.5e-22 109.0 71 73.2
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 1.5e-22 109.0 69 76.8
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 2.6e-22 108.2 69 78.3
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 3.3e-22 107.8 66 78.8
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 3.3e-22 107.8 70 75.7
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 4.4e-22 107.5 69 76.8
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 4.4e-22 107.5 69 76.8
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 4.4e-22 107.5 69 76.8
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 4.4e-22 107.5 72 73.6
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 7.4e-22 106.7 82 65.9
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 7.4e-22 106.7 70 74.3
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 7.4e-22 106.7 70 72.9
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 7.4e-22 106.7 71 76.1
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 7.4e-22 106.7 69 76.8
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 7.4e-22 106.7 69 76.8
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 9.7e-22 106.3 70 71.4
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 9.7e-22 106.3 71 73.2
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 1.3e-21 105.9 69 75.4
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 1.3e-21 105.9 72 68.1
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 1.3e-21 105.9 71 73.2
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 1.3e-21 105.9 70 74.3
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.3e-21 105.9 70 74.3
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.3e-21 105.9 70 74.3
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.3e-21 105.9 70 74.3
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 1.7e-21 105.5 70 74.3
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 2.2e-21 105.1 70 74.3
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 2.8e-21 104.8 70 74.3
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 2.8e-21 104.8 70 71.4
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 3.7e-21 104.4 70 72.9
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 4.8e-21 104.0 69 75.4
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 4.8e-21 104.0 70 71.4
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 4.8e-21 104.0 69 76.8
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 6.3e-21 103.6 70 74.3
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 6.3e-21 103.6 69 75.4
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 6.3e-21 103.6 70 71.4
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 6.3e-21 103.6 70 71.4
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 8.2e-21 103.2 70 74.3
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 1.1e-20 102.8 71 70.4
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 1.1e-20 102.8 71 70.4
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 1.1e-20 102.8 71 70.4
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 1.1e-20 102.8 69 73.9
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.8e-20 102.1 70 72.9
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 1.8e-20 102.1 69 73.9
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 1.8e-20 102.1 70 70.0
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 2.4e-20 101.7 69 72.5
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 2.4e-20 101.7 70 71.4
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 2.4e-20 101.7 69 71.0
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 3.1e-20 101.3 71 69.0
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 3.1e-20 101.3 70 68.6
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 5.3e-20 100.5 69 69.6
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 5.3e-20 100.5 69 72.5
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 5.3e-20 100.5 70 72.9
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 6.9e-20 100.1 66 75.8
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 9.1e-20 99.8 71 67.6
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 9.1e-20 99.8 70 70.0
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 1.2e-19 99.4 70 70.0
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 1.2e-19 99.4 70 68.6
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 1.2e-19 99.4 70 68.6
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 1.5e-19 99.0 70 67.1
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 1.5e-19 99.0 80 61.2
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 2.0e-19 98.6 68 72.1
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 2.6e-19 98.2 69 71.0
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 7.7e-19 96.7 65 72.3
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 7.7e-19 96.7 71 71.8
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 1.7e-18 95.5 69 68.1
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 1.7e-18 95.5 66 71.2
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 2.9e-18 94.7 72 65.3
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 2.9e-18 94.7 95 54.7
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 3.8e-18 94.4 68 66.2
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 1.1e-17 92.8 68 70.6
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 2.5e-17 91.7 59 76.3
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 4.2e-17 90.9 70 67.1
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 9.4e-17 89.7 66 68.2
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 1.2e-16 89.4 79 58.2
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 3.6e-16 87.8 66 66.7
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 1.8e-15 85.5 128 41.4
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 3.0e-15 84.7 72 59.7
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 4.4e-14 80.9 134 38.8
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 1.1e-12 76.3 69 59.4
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 1.1e-12 76.3 61 62.3
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 9.1e-12 73.2 50 74.0
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 2.6e-11 71.6 163 31.9
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 3.5e-11 71.2 57 61.4
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 4.5e-11 70.9 50 70.0
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 1.7e-10 68.9 52 63.5
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 3.8e-10 67.8 41 75.6
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 1.1e-09 66.2 39 76.9
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 1.9e-09 65.5 41 73.2
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 3.2e-09 64.7 39 76.9
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 3.2e-09 64.7 38 76.3
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 4.2e-09 64.3 39 76.9
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 4.2e-09 64.3 38 78.9
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 4.7e-08 60.8 39 69.2
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 6.1e-08 60.5 40 67.5
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 6.1e-08 60.5 39 71.8
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 1.0e-07 59.7 36 75.0
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 5.2e-07 57.4 42 64.3
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 6.7e-07 57.0 38 71.1
Cpa.g.sc16.95 Carica papaya HOM05D006941 ORTHO05D008361 7.5e-06 53.5 27 88.9


User provided reference genes

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