Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund21888 Selenicereus undatus HOM05D007619 ORTHO05D009522 9.7e-150 533.5 276 100.0
Hund27507 Selenicereus undatus HOM05D007619 ORTHO05D009522 1.5e-147 526.2 276 98.6
EL10Ac4g09950 Beta vulgaris HOM05D007619 ORTHO05D009522 8.3e-93 344.4 250 71.2
AUR62000347 Chenopodium quinoa HOM05D000031 ORTHO05D009522 2.4e-87 326.2 276 64.1
Ah.06g195590 Amaranthus hybridus HOM05D000031 ORTHO05D000030 4.3e-81 305.4 252 65.1
AUR62006691 Chenopodium quinoa HOM05D007619 ORTHO05D009522 8.7e-74 281.2 283 57.6
Sc09g0001560 Simmondsia chinensis HOM05D007619 ORTHO05D009522 7.9e-67 258.1 269 56.5
Eucgr.C02023 Eucalyptus grandis HOM05D007619 ORTHO05D009522 3.1e-63 246.1 192 67.7
Aqoxy2G03954 Aquilegia oxysepala HOM05D007619 ORTHO05D009522 3.8e-61 239.2 283 52.3
MD04G1241800 Malus domestica HOM05D007619 ORTHO05D009522 1.9e-60 236.9 282 51.8
GSVIVG01019143001 Vitis vinifera HOM05D007619 ORTHO05D009522 1.9e-60 236.9 275 50.5
RcHm_v2.0_Chr3g0448201 Rosa chinensis HOM05D007619 ORTHO05D009522 3.2e-60 236.1 276 51.4
Manes.09G184300 Manihot esculenta HOM05D007619 ORTHO05D009522 7.1e-60 235.0 191 65.4
Nn7g37654 Nelumbo nucifera HOM05D007619 ORTHO05D009522 1.2e-59 234.2 286 50.0
TAR633G2353 Trochodendron aralioides HOM05D007619 ORTHO05D009522 3.5e-59 232.6 283 50.5
Ciclev10012185m.g Citrus clementina HOM05D007619 ORTHO05D009522 7.9e-59 231.5 268 50.4
MBI11_g04278_MAGBIO Magnolia biondii HOM05D007619 ORTHO05D009522 7.9e-59 231.5 211 58.3
Gorai.004G260400 Gossypium raimondii HOM05D007619 ORTHO05D009522 1.3e-58 230.7 192 64.1
Thecc.05G206200 Theobroma cacao HOM05D007619 ORTHO05D009522 2.3e-58 229.9 284 51.4
Gohir.1Z049672 Gossypium hirsutum HOM05D007619 ORTHO05D009522 5.1e-58 228.8 192 63.5
Gohir.D08G244101 Gossypium hirsutum HOM05D007619 ORTHO05D009522 5.1e-58 228.8 192 63.5
Psat4g220960 Pisum sativum HOM05D007619 ORTHO05D009522 6.7e-58 228.4 192 64.1
Atru.chr12.2107 Acer truncatum HOM05D007619 ORTHO05D009522 1.1e-57 227.6 267 52.8
Cfa006282 Carpinus fangiana HOM05D007619 ORTHO05D009522 1.5e-57 227.3 271 50.2
PSO017G6303 Papaver somniferum HOM05D007619 ORTHO05D009522 4.3e-57 225.7 282 47.9
Haze_04528 Corylus avellana HOM05D007619 ORTHO05D009522 7.4e-57 224.9 273 50.2
Lalb_Chr21g0311391 Lupinus albus HOM05D007619 ORTHO05D009522 7.4e-57 224.9 201 61.2
Glyma.10G170300 Glycine max HOM05D007619 ORTHO05D009522 9.6e-57 224.6 281 48.4
Hma1.2p1_0220F.1_g093010 Hydrangea macrophylla HOM05D007619 ORTHO05D009522 9.6e-57 224.6 265 50.6
ClCG11G010990 Citrullus lanatus HOM05D007619 ORTHO05D009522 2.1e-56 223.4 266 49.2
Phvul.010G077712 Phaseolus vulgaris HOM05D007619 ORTHO05D009522 2.1e-56 223.4 287 48.1
Lalb_Chr02g0149381 Lupinus albus HOM05D007619 ORTHO05D009522 1.1e-55 221.1 210 58.6
Ca_09970_v3 Cicer arietinum L. HOM05D007619 ORTHO05D009522 1.8e-55 220.3 270 50.0
TPR.G14653 Trifolium pratense HOM05D007619 ORTHO05D009522 2.4e-55 219.9 192 62.5
Glyma.20G219700 Glycine max HOM05D007619 ORTHO05D009522 5.3e-55 218.8 280 48.6
arahy.Tifrunner.gnm1.ann1.P2W93U Arachis hypogaea HOM05D007619 ORTHO05D009522 9.0e-55 218.0 219 56.6
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 9.0e-55 218.0 217 59.0
arahy.Tifrunner.gnm1.ann1.YK6SIT Arachis hypogaea HOM05D007619 ORTHO05D009522 2.6e-54 216.5 192 61.5
VMungo0720G2770 Vigna mungo HOM05D007619 ORTHO05D009522 5.8e-54 215.3 214 57.5
Solyc05g055830.3 Solanum lycopersicum HOM05D007619 ORTHO05D009522 1.7e-53 213.8 194 54.6
PGSC0003DMG400023471 Solanum tuberosum HOM05D007619 ORTHO05D009522 2.2e-53 213.4 194 54.6
CsaV3_2G009500 Cucumis sativus L. HOM05D007619 ORTHO05D009522 3.8e-53 212.6 244 48.4
Sopen05g034230 Solanum pennellii HOM05D007619 ORTHO05D009522 3.8e-53 212.6 194 54.1
FAN09G3963 Fragaria x ananassa HOM05D007619 ORTHO05D009522 6.5e-53 211.8 320 44.4
CDE07G1839 Ceratophyllum demersum HOM05D007619 ORTHO05D009522 1.1e-52 211.1 194 58.2
MELO3C008758.2 Cucumis melo HOM05D007619 ORTHO05D009522 1.4e-52 210.7 191 56.5
CDE04G2379 Ceratophyllum demersum HOM05D007619 ORTHO05D009522 1.9e-52 210.3 199 59.3
Cc09_g03420 Coffea canephora HOM05D007619 ORTHO05D009522 4.2e-52 209.1 269 48.3
FAN05G3312 Fragaria x ananassa HOM05D007619 ORTHO05D009522 7.1e-52 208.4 357 40.6
Peaxi162Scf00156g00417 Petunia axillaris HOM05D007619 ORTHO05D009522 9.3e-52 208.0 195 54.4
CAN.G694.14 Capsicum annuum HOM05D007619 ORTHO05D009522 2.1e-51 206.8 190 54.7
HanXRQChr07g0190091 Helianthus annuus HOM05D007619 ORTHO05D009522 4.6e-51 205.7 196 56.6
Potri.013G087300 Populus trichocarpa HOM05D007619 ORTHO05D009522 4.6e-51 205.7 244 47.5
Medtr1g078380 Medicago truncatula HOM05D007619 ORTHO05D009522 2.3e-50 203.4 268 48.1
ECA238G3388 Erigeron canadensis HOM05D000092 ORTHO05D000042 3.9e-50 202.6 248 45.6
FAN14G0392 Fragaria x ananassa HOM05D007619 ORTHO05D009522 1.5e-49 200.7 317 43.2
Lsat_1_v5_gn_2_17180 Lactuca sativa HOM05D007619 ORTHO05D009522 1.5e-49 200.7 204 52.5
vmacro10399 Vaccinium macrocarpon HOM05D007619 ORTHO05D009522 7.4e-49 198.4 232 50.0
SGA_v2.0_scaffold340G49291 Striga asiatica HOM05D007619 ORTHO05D009522 9.7e-49 198.0 238 46.6
Gohir.A08G223800 Gossypium hirsutum HOM05D007619 ORTHO05D009522 3.7e-48 196.1 161 63.4
Migut.F01883 Erythranthe guttata HOM05D007619 ORTHO05D009522 4.1e-47 192.6 222 49.5
MSTRG.27407 Avicennia marina HOM05D007619 ORTHO05D009522 2.0e-46 190.3 216 49.1
Actinidia34778 Actinidia chinensis HOM05D007619 ORTHO05D009522 2.6e-46 189.9 168 58.9
TPR.G14659 Trifolium pratense HOM05D007619 ORTHO05D009522 7.7e-46 188.3 275 45.8
HPP92_024640 Vanilla planifolia HOM05D001334 ORTHO05D001119 6.5e-45 185.3 177 57.1
FAN02G4130 Fragaria x ananassa HOM05D007619 ORTHO05D009522 1.1e-44 184.5 287 44.3
CiPaw.08G116400 Carya illinoinensis HOM05D007619 ORTHO05D009522 2.5e-44 183.3 238 45.8
Duzib128G0301 Durio zibethinus HOM05D007619 ORTHO05D009522 2.5e-44 183.3 237 49.4
Os01g0100600 Oryza sativa ssp. japonica HOM05D007619 ORTHO05D009522 2.1e-43 180.3 241 44.4
Zm00001eb394570 Zea mays HOM05D007619 ORTHO05D009522 3.6e-43 179.5 237 44.7
Sed0001247 Sechium edule HOM05D007619 ORTHO05D009522 3.0e-42 176.4 199 50.3
Lj5g0000048 Lotus japonicus HOM05D007619 ORTHO05D009522 1.5e-41 174.1 234 46.2
Oeu010149.1 Olea europaea HOM05D007619 ORTHO05D009522 3.3e-41 172.9 210 46.7
PSO675G7165 Papaver somniferum HOM05D007619 ORTHO05D009522 3.7e-40 169.5 224 45.1
Prupe.6G359200 Prunus persica HOM05D007619 ORTHO05D009522 4.8e-40 169.1 215 49.3
Zm00001eb017060 Zea mays HOM05D007619 ORTHO05D009522 1.1e-39 167.9 223 45.7
Mapoly0093s0084 Marchantia polymorpha HOM05D007619 ORTHO05D009522 1.3e-37 161.0 190 48.9
Nitab4.5_0009285g0010 Nicotiana tabacum HOM05D007619 ORTHO05D009522 8.5e-37 158.3 279 36.2
Pp3c8_1020 Physcomitrium patens HOM05D007619 ORTHO05D009522 7.9e-35 151.8 216 44.9
Nitab4.5_0005183g0010 Nicotiana tabacum HOM05D007619 ORTHO05D009522 7.4e-33 145.2 275 36.0
SalBow6G3661 Salvia bowleyana HOM05D007619 ORTHO05D009522 2.8e-32 143.3 226 42.9
Rhsim09G0130800 Rhododendron simsii HOM05D003215 ORTHO05D003735 7.0e-31 138.7 343 34.1
AagrBONN_evm.TU.Sc2ySwM_117.3969 Anthoceros agrestis HOM05D007619 ORTHO05D009522 5.9e-30 135.6 284 37.7
SEGI_00786 Sequoiadendron giganteum HOM05D007619 ORTHO05D009522 8.5e-29 131.7 119 56.3
Dinv29118 Davidia involucrata HOM05D007619 ORTHO05D009522 1.1e-28 131.3 116 59.5
Sabra18G0055400 Salix brachista HOM05D007619 ORTHO05D009522 2.5e-28 130.2 98 63.3
QL01p050350 Quercus lobata HOM05D000003 ORTHO05D000004 3.2e-28 129.8 101 64.4
Oeu040489.1 Olea europaea HOM05D007619 ORTHO05D009522 1.6e-27 127.5 99 61.6
MD12G1258700 Malus domestica HOM05D007619 ORTHO05D009522 3.6e-27 126.3 78 71.8
SMO230G0088 Selaginella moellendorffii HOM05D007619 ORTHO05D009522 5.9e-22 109.0 203 37.9
SHI13735 Sapria himalayana HOM05D007619 ORTHO05D009522 7.2e-20 102.1 168 41.7
Actinidia38907 Actinidia chinensis HOM05D003215 ORTHO05D003735 1.3e-16 91.3 133 41.4
Cpa.g.c37388 Carica papaya HOM05D007619 ORTHO05D009522 3.1e-15 86.7 50 76.0
MD12G1258600 Malus domestica HOM05D007619 ORTHO05D009522 1.0e-10 71.6 135 41.5
Cpa.g.sc1371.1 Carica papaya HOM05D007619 ORTHO05D009522 8.8e-10 68.6 118 41.5
FvH4_6g00730 Fragaria vesca HOM05D007619 ORTHO05D009522 2.6e-09 67.0 60 61.7
ATR0609G094 Amborella trichopoda HOM05D007619 ORTHO05D009522 1.1e-07 61.6 50 66.0
SEGI_37386 Sequoiadendron giganteum HOM05D007619 ORTHO05D009522 3.1e-07 60.1 94 43.6
Sabra18G0055300 Salix brachista HOM05D007619 ORTHO05D009522 7.0e-07 58.9 101 36.6


User provided reference genes

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