Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund21883 Selenicereus undatus HOM05D005279 ORTHO05D037448 8.9e-72 273.5 136 100.0
Hund30008 Selenicereus undatus HOM05D005279 ORTHO05D037448 4.2e-45 184.9 94 100.0
Hund07324 Selenicereus undatus HOM05D005279 ORTHO05D006757 1.8e-19 99.8 97 56.7
Ah.04g158770 Amaranthus hybridus HOM05D005279 ORTHO05D006757 9.4e-13 77.4 64 62.5
AUR62006699 Chenopodium quinoa HOM05D005279 ORTHO05D006757 6.1e-12 74.7 97 46.4
Duzib177G0028 Durio zibethinus HOM05D005279 ORTHO05D006757 1.0e-11 73.9 58 62.1
Gohir.D08G244200 Gossypium hirsutum HOM05D005279 ORTHO05D006757 2.3e-11 72.8 102 42.2
Gorai.004G260500 Gossypium raimondii HOM05D005279 ORTHO05D006757 2.3e-11 72.8 102 42.2
Gohir.A08G223900 Gossypium hirsutum HOM05D005279 ORTHO05D006757 3.0e-11 72.4 102 43.1
TAR633G0866 Trochodendron aralioides HOM05D005279 ORTHO05D006757 3.0e-11 72.4 59 61.0
AUR62000356 Chenopodium quinoa HOM05D005279 ORTHO05D006757 3.9e-11 72.0 67 58.2
MD12G1258400 Malus domestica HOM05D005279 ORTHO05D006757 8.8e-11 70.9 73 53.4
EL10Ac4g09419 Beta vulgaris HOM05D005279 ORTHO05D006757 1.5e-10 70.1 97 44.3
FAN02G0830 Fragaria x ananassa HOM05D005279 ORTHO05D006757 3.3e-10 68.9 79 46.8
Glyma.18G240300 Glycine max HOM05D005279 ORTHO05D006757 3.3e-10 68.9 113 36.3
Nn1g08317 Nelumbo nucifera HOM05D005279 ORTHO05D006757 3.3e-10 68.9 59 64.4
FvH4_6g00750 Fragaria vesca HOM05D005279 ORTHO05D006757 4.4e-10 68.6 68 51.5
FAN05G0195 Fragaria x ananassa HOM05D005279 ORTHO05D006757 4.4e-10 68.6 68 51.5
FAN14G2044 Fragaria x ananassa HOM05D005279 ORTHO05D006757 4.4e-10 68.6 68 51.5
Manes.09G184200 Manihot esculenta HOM05D005279 ORTHO05D006757 4.4e-10 68.6 65 53.8
MD04G1241700 Malus domestica HOM05D005279 ORTHO05D006757 5.7e-10 68.2 81 45.7
PSO675G1387 Papaver somniferum HOM05D005279 ORTHO05D006757 7.4e-10 67.8 71 52.1
vmacro10395 Vaccinium macrocarpon HOM05D005279 ORTHO05D006757 7.4e-10 67.8 77 49.4
FAN09G4620 Fragaria x ananassa HOM05D005279 ORTHO05D006757 1.7e-09 66.6 68 48.5
Haze_04527 Corylus avellana HOM05D005279 ORTHO05D006757 2.2e-09 66.2 100 43.0
Actinidia38912 Actinidia chinensis HOM05D005279 ORTHO05D006757 2.8e-09 65.9 59 55.9
COL.COLO4_19830 Corchorus olitorius HOM05D005279 ORTHO05D006757 1.1e-08 63.9 112 35.7
CSS0049023 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 1.4e-08 63.5 61 54.1
CiPaw.08G116500 Carya illinoinensis HOM05D005279 ORTHO05D006757 1.4e-08 63.5 62 51.6
Dinv09865 Davidia involucrata HOM05D005279 ORTHO05D006757 1.4e-08 63.5 73 49.3
Duzib128G1767 Durio zibethinus HOM05D005279 ORTHO05D006757 1.4e-08 63.5 63 52.4
Lj1g0001090 Lotus japonicus HOM05D005279 ORTHO05D006757 1.4e-08 63.5 53 60.4
Thecc.05G206100 Theobroma cacao HOM05D005279 ORTHO05D006757 1.8e-08 63.2 63 47.6
Ca_07964_v3 Cicer arietinum L. HOM05D005279 ORTHO05D006757 3.1e-08 62.4 67 50.7
Rhsim09G0131400 Rhododendron simsii HOM05D005279 ORTHO05D006757 3.1e-08 62.4 70 48.6
Phvul.008G055900 Phaseolus vulgaris HOM05D005279 ORTHO05D006757 5.3e-08 61.6 60 53.3
TWI23G0564 Tripterygium wilfordii HOM05D005279 ORTHO05D006757 5.3e-08 61.6 57 49.1
Cc09_g03410 Coffea canephora HOM05D005279 ORTHO05D006757 7.0e-08 61.2 59 50.8
Psat3g104240 Pisum sativum HOM05D005279 ORTHO05D006757 7.0e-08 61.2 72 44.4
RcHm_v2.0_Chr3g0448231 Rosa chinensis HOM05D005279 ORTHO05D006757 7.0e-08 61.2 63 50.8
Ciclev10011262m.g Citrus clementina HOM05D005279 ORTHO05D006757 9.1e-08 60.8 76 50.0
Potri.013G087400 Populus trichocarpa HOM05D005279 ORTHO05D006757 9.1e-08 60.8 78 44.9
QL01p050333 Quercus lobata HOM05D005279 ORTHO05D037448 1.2e-07 60.5 121 36.4
Atru.chr12.2109 Acer truncatum HOM05D005279 ORTHO05D006757 1.5e-07 60.1 114 38.6
arahy.Tifrunner.gnm1.ann1.GMHU8S Arachis hypogaea HOM05D005279 ORTHO05D006757 1.5e-07 60.1 58 51.7
Sabra13G0070000 Salix brachista HOM05D005279 ORTHO05D006757 1.5e-07 60.1 78 44.9
Sed0005684 Sechium edule HOM05D005279 ORTHO05D006757 1.5e-07 60.1 55 58.2
VMungo1383G2490 Vigna mungo HOM05D005279 ORTHO05D006757 1.5e-07 60.1 73 43.8
BraA03t10110Z Brassica rapa HOM05D005279 ORTHO05D006757 2.0e-07 59.7 136 34.6
Eucgr.H01378 Eucalyptus grandis HOM05D005279 ORTHO05D006757 2.0e-07 59.7 68 50.0
Lsat_1_v5_gn_9_48740 Lactuca sativa HOM05D005279 ORTHO05D006757 2.0e-07 59.7 106 39.6
Medtr7g079510 Medicago truncatula HOM05D005279 ORTHO05D006757 2.0e-07 59.7 72 41.7
Peaxi162Scf00994g00010 Petunia axillaris HOM05D005279 ORTHO05D006757 2.0e-07 59.7 66 47.0
ECA232G1216 Erigeron canadensis HOM05D005279 ORTHO05D006757 2.6e-07 59.3 63 50.8
CsaV3_2G009490 Cucumis sativus L. HOM05D005279 ORTHO05D006757 3.4e-07 58.9 54 57.4
GSVIVG01019132001 Vitis vinifera HOM05D005279 ORTHO05D006757 3.4e-07 58.9 74 47.3
arahy.Tifrunner.gnm1.ann1.X9YPPN Arachis hypogaea HOM05D005279 ORTHO05D006757 4.5e-07 58.5 58 50.0
HanXRQChr11g0323931 Helianthus annuus HOM05D005279 ORTHO05D006757 4.5e-07 58.5 95 41.1
TPR.G32005 Trifolium pratense HOM05D005279 ORTHO05D006757 4.5e-07 58.5 58 50.0
MELO3C008759.2 Cucumis melo HOM05D005279 ORTHO05D006757 5.9e-07 58.2 100 42.0
A03p07830 Brassica napus HOM05D005279 ORTHO05D006757 7.7e-07 57.8 136 33.8
Aqoxy2G03953 Aquilegia oxysepala HOM05D005279 ORTHO05D006757 1.0e-06 57.4 89 42.7
BcaB01g04978 Brassica carinata HOM05D005279 ORTHO05D006757 1.0e-06 57.4 133 33.8
BolC3t13400H Brassica oleracea HOM05D005279 ORTHO05D006757 1.0e-06 57.4 133 33.8
Lsat_1_v5_gn_8_2100 Lactuca sativa HOM05D005279 ORTHO05D006757 1.0e-06 57.4 61 49.2
Lalb_Chr19g0126771 Lupinus albus HOM05D005279 ORTHO05D006757 1.0e-06 57.4 65 46.2
Nitab4.5_0000276g0070 Nicotiana tabacum HOM05D005279 ORTHO05D006757 1.0e-06 57.4 61 49.2
C03p09050 Brassica napus HOM05D005279 ORTHO05D006757 1.3e-06 57.0 133 33.8
ECA233G5391 Erigeron canadensis HOM05D005279 ORTHO05D006757 1.3e-06 57.0 61 49.2
Glyma.09G252300 Glycine max HOM05D005279 ORTHO05D006757 2.2e-06 56.2 50 56.0
HanXRQChr05g0156961 Helianthus annuus HOM05D005279 ORTHO05D006757 2.9e-06 55.8 61 45.9
PGSC0003DMG401016935 Solanum tuberosum HOM05D005279 ORTHO05D006757 3.8e-06 55.5 90 37.8
PGR031G1864 Punica granatum HOM05D005279 ORTHO05D006757 6.5e-06 54.7 52 50.0
Nitab4.5_0000456g0100 Nicotiana tabacum HOM05D005279 ORTHO05D006757 8.5e-06 54.3 51 52.9
Solyc04g051310.4 Solanum lycopersicum HOM05D005279 ORTHO05D006757 8.5e-06 54.3 59 45.8
Sopen04g022730 Solanum pennellii HOM05D005279 ORTHO05D006757 8.5e-06 54.3 65 41.5


User provided reference genes

Program Settings