Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund21831 Selenicereus undatus HOM05D001662 ORTHO05D007520 2.1e-51 205.3 97 100.0
EL10Ac4g09568 Beta vulgaris HOM05D001662 ORTHO05D007520 6.4e-24 114.0 48 93.8
AUR62006823 Chenopodium quinoa HOM05D001662 ORTHO05D007520 6.4e-24 114.0 48 93.8
AUR62000480 Chenopodium quinoa HOM05D001662 ORTHO05D007520 8.4e-24 113.6 55 85.5
Hund07269 Selenicereus undatus HOM05D001662 ORTHO05D007520 3.2e-23 111.7 48 91.7
Ah.06g190750 Amaranthus hybridus HOM05D001662 ORTHO05D007520 9.3e-23 110.2 47 93.6
Peaxi162Scf00585g00110 Petunia axillaris HOM05D002440 ORTHO05D002576 1.6e-22 109.4 47 91.5
Prupe.2G083700 Prunus persica HOM05D001662 ORTHO05D007520 2.7e-22 108.6 47 91.5
Os03g0302700 Oryza sativa ssp. japonica HOM05D001662 ORTHO05D007520 3.5e-22 108.2 47 89.4
QL03p013942 Quercus lobata HOM05D000001 ORTHO05D000003 4.6e-22 107.8 65 69.2
Os07g0411200 Oryza sativa ssp. japonica HOM05D001662 ORTHO05D007520 1.8e-21 105.9 47 87.2
Cc10_g10070 Coffea canephora HOM05D001662 ORTHO05D007520 2.3e-21 105.5 77 61.0
AL8G16030 Arabidopsis lyrata HOM05D001662 ORTHO05D007520 6.7e-21 104.0 50 86.0
AT3G05870 Arabidopsis thaliana HOM05D001662 ORTHO05D007520 6.7e-21 104.0 50 86.0
MD04G1186000 Malus domestica HOM05D001662 ORTHO05D007520 6.7e-21 104.0 52 82.7
Oeu062794.1 Olea europaea HOM05D001662 ORTHO05D007520 1.1e-20 103.2 42 95.2
Oeu062796.1 Olea europaea HOM05D001662 ORTHO05D007520 1.1e-20 103.2 42 95.2
TWI75G1241 Tripterygium wilfordii HOM05D001662 ORTHO05D007520 1.1e-20 103.2 51 84.3
AL3G16630 Arabidopsis lyrata HOM05D001662 ORTHO05D007520 1.5e-20 102.8 96 54.2
RcHm_v2.0_Chr1g0321441 Rosa chinensis HOM05D001662 ORTHO05D007520 1.5e-20 102.8 49 79.6
FAN05G0725 Fragaria x ananassa HOM05D001662 ORTHO05D007520 1.9e-20 102.4 55 76.4
TPR.G3331 Trifolium pratense HOM05D001662 ORTHO05D007520 1.9e-20 102.4 42 92.9
C07p41570 Brassica napus HOM05D001662 ORTHO05D007520 2.5e-20 102.1 70 60.0
CANSAT54G1905 Cannabis sativa HOM05D001662 ORTHO05D007520 2.5e-20 102.1 41 95.1
FAN02G1833 Fragaria x ananassa HOM05D001662 ORTHO05D007520 2.5e-20 102.1 43 90.7
BraA02t08875Z Brassica rapa HOM05D001662 ORTHO05D007520 3.3e-20 101.7 83 54.2
Ciclev10006206m.g Citrus clementina HOM05D001662 ORTHO05D007520 3.3e-20 101.7 41 95.1
Dinv03875 Davidia involucrata HOM05D001662 ORTHO05D007520 3.3e-20 101.7 41 95.1
Lj5g0007829 Lotus japonicus HOM05D001662 ORTHO05D007520 3.3e-20 101.7 41 95.1
Nitab4.5_0002572g0010 Nicotiana tabacum HOM05D001662 ORTHO05D007520 3.3e-20 101.7 42 92.9
Oeu061907.1 Olea europaea HOM05D001662 ORTHO05D007520 3.3e-20 101.7 41 95.1
TPR.G14231 Trifolium pratense HOM05D001662 ORTHO05D007520 3.3e-20 101.7 41 95.1
GSVIVG01026815001 Vitis vinifera HOM05D001662 ORTHO05D007520 3.3e-20 101.7 41 95.1
GSVIVG01031335001 Vitis vinifera HOM05D001662 ORTHO05D007520 3.3e-20 101.7 41 95.1
BcaB05g22003 Brassica carinata HOM05D001662 ORTHO05D007520 4.3e-20 101.3 42 92.9
BcaC03g17836 Brassica carinata HOM05D001662 ORTHO05D007520 4.3e-20 101.3 42 92.9
CiPaw.01G001400 Carya illinoinensis HOM05D001662 ORTHO05D007520 4.3e-20 101.3 40 97.5
DCAR_025400 Daucus carota HOM05D001662 ORTHO05D007520 4.3e-20 101.3 40 97.5
FAN02G1014 Fragaria x ananassa HOM05D001662 ORTHO05D007520 4.3e-20 101.3 42 92.9
FAN09G2109 Fragaria x ananassa HOM05D001662 ORTHO05D007520 4.3e-20 101.3 42 92.9
FAN14G0262 Fragaria x ananassa HOM05D001662 ORTHO05D007520 4.3e-20 101.3 42 92.9
FAN14G1181 Fragaria x ananassa HOM05D001662 ORTHO05D007520 4.3e-20 101.3 42 92.9
Medtr4g007410 Medicago truncatula HOM05D001662 ORTHO05D007520 4.3e-20 101.3 40 97.5
Nitab4.5_0000081g0250 Nicotiana tabacum HOM05D001662 ORTHO05D007520 4.3e-20 101.3 40 97.5
PGR142G3386 Punica granatum HOM05D001662 ORTHO05D007520 4.3e-20 101.3 40 97.5
TWI36G1680 Tripterygium wilfordii HOM05D001662 ORTHO05D007520 4.3e-20 101.3 40 97.5
A06p36930 Brassica napus HOM05D001662 ORTHO05D007520 5.6e-20 100.9 65 66.2
FvH4_6g08560 Fragaria vesca HOM05D001662 ORTHO05D007520 5.6e-20 100.9 41 92.7
Sed0008097 Sechium edule HOM05D001662 ORTHO05D007520 5.6e-20 100.9 45 86.7
vmacro01666 Vaccinium macrocarpon HOM05D001662 ORTHO05D007520 5.6e-20 100.9 41 97.6
Actinidia01661 Actinidia chinensis HOM05D001662 ORTHO05D007520 7.4e-20 100.5 40 97.5
BcaB07g29943 Brassica carinata HOM05D001662 ORTHO05D007520 7.4e-20 100.5 42 92.9
BcaNung03684 Brassica carinata HOM05D001662 ORTHO05D007520 7.4e-20 100.5 42 92.9
BcaNung03905 Brassica carinata HOM05D001662 ORTHO05D007520 7.4e-20 100.5 43 88.4
FvH4_6g43400 Fragaria vesca HOM05D001662 ORTHO05D007520 7.4e-20 100.5 41 92.7
Lj4g0014736 Lotus japonicus HOM05D001662 ORTHO05D007520 7.4e-20 100.5 40 95.0
Nitab4.5_0006117g0020 Nicotiana tabacum HOM05D001662 ORTHO05D007520 7.4e-20 100.5 42 95.2
PSO729G0020 Papaver somniferum HOM05D001662 ORTHO05D007520 7.4e-20 100.5 47 83.0
Sp3g04760 Schrenkiella parvula HOM05D001662 ORTHO05D007520 7.4e-20 100.5 40 97.5
PGSC0003DMG400018281 Solanum tuberosum HOM05D001662 ORTHO05D007520 7.4e-20 100.5 41 92.7
SGA_v2.0_scaffold279G46779 Striga asiatica HOM05D001662 ORTHO05D007520 7.4e-20 100.5 49 75.5
MELO3C028650.2 Cucumis melo HOM05D001662 ORTHO05D007520 9.6e-20 100.1 41 92.7
CsaV3_7G024700 Cucumis sativus L. HOM05D001662 ORTHO05D007520 9.6e-20 100.1 41 92.7
MD05G1140700 Malus domestica HOM05D001662 ORTHO05D007520 9.6e-20 100.1 56 73.2
Rhsim11G0105600 Rhododendron simsii HOM05D001662 ORTHO05D007520 9.6e-20 100.1 40 97.5
Sed0021388 Sechium edule HOM05D001662 ORTHO05D007520 9.6e-20 100.1 41 92.7
A02p39060 Brassica napus HOM05D001662 ORTHO05D007520 1.3e-19 99.8 41 92.7
C02p58680 Brassica napus HOM05D001662 ORTHO05D007520 1.3e-19 99.8 41 92.7
BolC2t11928H Brassica oleracea HOM05D001662 ORTHO05D007520 1.3e-19 99.8 41 92.7
BolC7t44690H Brassica oleracea HOM05D001662 ORTHO05D007520 1.3e-19 99.8 41 92.7
ClCG09G010060 Citrullus lanatus HOM05D001662 ORTHO05D007520 1.3e-19 99.8 41 92.7
Nitab4.5_0002516g0040 Nicotiana tabacum HOM05D001662 ORTHO05D007520 1.3e-19 99.8 39 100.0
Migut.D01691 Erythranthe guttata HOM05D001662 ORTHO05D007520 1.6e-19 99.4 41 90.2
Thhalv10005548m.g Eutrema salsugineum HOM05D001662 ORTHO05D007520 1.6e-19 99.4 40 95.0
Nitab4.5_0001463g0140 Nicotiana tabacum HOM05D001662 ORTHO05D007520 1.6e-19 99.4 51 80.4
Aqoxy24s001 Aquilegia oxysepala HOM05D001662 ORTHO05D007520 2.1e-19 99.0 40 92.5
CAN.G1248.13 Capsicum annuum HOM05D001662 ORTHO05D007520 2.1e-19 99.0 40 95.0
COL.COLO4_04114 Corchorus olitorius HOM05D001662 ORTHO05D007520 2.8e-19 98.6 41 92.7
Duzib170G0793 Durio zibethinus HOM05D001662 ORTHO05D007520 3.7e-19 98.2 40 95.0
Gorai.013G252500 Gossypium raimondii HOM05D001662 ORTHO05D007520 3.7e-19 98.2 40 95.0
unitig_8.g2972 Utricularia gibba HOM05D001662 ORTHO05D007520 6.2e-19 97.4 41 87.8
Haze_15020 Corylus avellana HOM05D001662 ORTHO05D007520 1.1e-18 96.7 39 94.9
ECA236G3263 Erigeron canadensis HOM05D001662 ORTHO05D007520 1.1e-18 96.7 64 65.6
SGA_v2.0_scaffold117G32418 Striga asiatica HOM05D001662 ORTHO05D007520 1.1e-18 96.7 39 94.9
SMO356G0205 Selaginella moellendorffii HOM05D001662 ORTHO05D007520 1.8e-18 95.9 41 85.4
THA.LOC104818757 Tarenaya hassleriana HOM05D001662 ORTHO05D007520 1.8e-18 95.9 42 85.7
CSS0043752 Camellia sinensis var. sinensis HOM05D001662 ORTHO05D007520 2.4e-18 95.5 41 90.2
Lsat_1_v5_gn_5_34581 Lactuca sativa HOM05D001662 ORTHO05D007520 3.1e-18 95.1 39 94.9
CSS0010750 Camellia sinensis var. sinensis HOM05D001662 ORTHO05D007520 4.0e-18 94.7 43 81.4
PSO761G0719 Papaver somniferum HOM05D001662 ORTHO05D007520 4.0e-18 94.7 42 85.7
SHI10338 Sapria himalayana HOM05D001662 ORTHO05D007520 4.0e-18 94.7 41 85.4
MBI18_g25058_MAGBIO Magnolia biondii HOM05D001662 ORTHO05D007520 5.3e-18 94.4 43 83.7
FAN09G4621 Fragaria x ananassa HOM05D001662 ORTHO05D007520 6.9e-18 94.0 40 87.5
Medtr7g005900 Medicago truncatula HOM05D001662 ORTHO05D007520 9.3e-15 83.6 33 97.0
BraA06t26618Z Brassica rapa HOM05D001662 ORTHO05D007520 1.0e-13 80.1 32 96.9
Carub.0005s0519 Capsella rubella HOM05D001662 ORTHO05D007520 2.3e-13 79.0 97 48.5
SEGI_36157 Sequoiadendron giganteum HOM05D001662 ORTHO05D007520 1.9e-12 75.9 41 68.3
Cre13.g590900 Chlamydomonas reinhardtii HOM05D001662 ORTHO05D007520 5.7e-12 74.3 46 63.0
Cfa026893 Carpinus fangiana HOM05D005041 ORTHO05D006003 4.8e-11 71.2 48 58.3
AT5G26640 Arabidopsis thaliana HOM05D001662 ORTHO05D007520 1.1e-10 70.1 32 84.4
MCO02G295 Micromonas commoda HOM05D001662 ORTHO05D007520 8.5e-08 60.5 40 62.5
vmacro14356 Vaccinium macrocarpon HOM05D001662 ORTHO05D007520 4.6e-06 54.7 23 91.3


User provided reference genes

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