Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund21761 Selenicereus undatus HOM05D004337 ORTHO05D005422 0.0e+00 1165.6 593 100.0
EL10Ac4g09743 Beta vulgaris HOM05D004337 ORTHO05D005422 1.5e-293 1012.3 560 86.6
AUR62006971 Chenopodium quinoa HOM05D004337 ORTHO05D005422 4.9e-292 1007.3 592 83.1
AUR62000615 Chenopodium quinoa HOM05D004337 ORTHO05D005422 1.4e-291 1005.7 592 82.9
Sc16g0009860 Simmondsia chinensis HOM05D004337 ORTHO05D005422 6.0e-282 973.8 576 81.2
Dinv09624 Davidia involucrata HOM05D004337 ORTHO05D005422 1.9e-280 968.8 570 80.7
TAR376G0777 Trochodendron aralioides HOM05D004337 ORTHO05D005422 7.4e-280 966.8 568 80.8
Cfa020919 Carpinus fangiana HOM05D004337 ORTHO05D005422 9.6e-280 966.5 569 81.0
Gohir.A12G002300 Gossypium hirsutum HOM05D004337 ORTHO05D005422 1.3e-279 966.1 567 81.3
CiPaw.15G184900 Carya illinoinensis HOM05D004337 ORTHO05D005422 1.8e-278 962.2 568 81.7
Actinidia36582 Actinidia chinensis HOM05D004337 ORTHO05D005422 1.5e-277 959.1 576 80.4
Potri.004G134500 Populus trichocarpa HOM05D004337 ORTHO05D005422 2.0e-277 958.7 567 80.8
Potri.T045800 Populus trichocarpa HOM05D004337 ORTHO05D005422 3.4e-277 958.0 567 81.0
GSVIVG01000243001 Vitis vinifera HOM05D004337 ORTHO05D005422 3.4e-277 958.0 570 81.1
CsaV3_4G030000 Cucumis sativus L. HOM05D004337 ORTHO05D005422 1.0e-276 956.4 569 81.2
Potri.018G137500 Populus trichocarpa HOM05D004337 ORTHO05D005422 1.0e-276 956.4 567 80.8
MELO3C003282.2 Cucumis melo HOM05D004337 ORTHO05D005422 2.2e-276 955.3 569 80.8
Gorai.008G001400 Gossypium raimondii HOM05D004337 ORTHO05D005422 2.2e-276 955.3 574 80.0
Thecc.01G146600 Theobroma cacao HOM05D004337 ORTHO05D005422 2.2e-276 955.3 570 79.3
Gohir.A05G375100 Gossypium hirsutum HOM05D004337 ORTHO05D005422 3.8e-276 954.5 568 80.3
Gohir.D04G040600 Gossypium hirsutum HOM05D004337 ORTHO05D005422 6.5e-276 953.7 568 80.3
Gorai.012G045800 Gossypium raimondii HOM05D004337 ORTHO05D005422 6.5e-276 953.7 568 80.3
Actinidia19947 Actinidia chinensis HOM05D004337 ORTHO05D005422 8.4e-276 953.4 570 81.1
Peaxi162Scf00353g00735 Petunia axillaris HOM05D004337 ORTHO05D005422 3.2e-275 951.4 576 78.5
Manes.12G081000 Manihot esculenta HOM05D004337 ORTHO05D005422 4.2e-275 951.0 567 79.7
Sabra04G0083600 Salix brachista HOM05D004337 ORTHO05D005422 4.2e-275 951.0 567 79.9
Aqoxy5G01850 Aquilegia oxysepala HOM05D004337 ORTHO05D005422 9.3e-275 949.9 571 80.4
Hma1.2p1_0296F.1_g116900 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 1.2e-274 949.5 568 79.8
PGR119G0424 Punica granatum HOM05D004337 ORTHO05D005422 2.3e-273 945.3 572 81.3
Sed0025757 Sechium edule HOM05D004337 ORTHO05D005422 3.0e-273 944.9 569 80.0
Prupe.4G286100 Prunus persica HOM05D004337 ORTHO05D005422 6.7e-273 943.7 567 79.5
MBI06_g32147_MAGBIO Magnolia biondii HOM05D004337 ORTHO05D005422 1.1e-272 943.0 576 78.6
Atru.chr3.1466 Acer truncatum HOM05D004337 ORTHO05D005422 5.7e-272 940.6 573 79.1
QL10p037473 Quercus lobata HOM05D004337 ORTHO05D005422 5.7e-272 940.6 568 79.9
CAN.G1156.26 Capsicum annuum HOM05D004337 ORTHO05D005422 7.4e-272 940.3 567 78.3
CANSAT54G2432 Cannabis sativa HOM05D004337 ORTHO05D005422 2.1e-271 938.7 577 78.3
Ciclev10025224m.g Citrus clementina HOM05D004337 ORTHO05D005422 4.8e-271 937.6 569 79.4
Sopen05g034740 Solanum pennellii HOM05D004337 ORTHO05D005422 1.4e-270 936.0 571 77.4
Solyc05g056350.3 Solanum lycopersicum HOM05D004337 ORTHO05D005422 1.8e-270 935.6 571 77.4
THA.LOC104818397 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 4.1e-270 934.5 567 80.1
Migut.H02542 Erythranthe guttata HOM05D004337 ORTHO05D005422 5.3e-270 934.1 570 77.9
MD15G1140200 Malus domestica HOM05D004337 ORTHO05D005422 6.9e-270 933.7 548 80.7
Lalb_Chr07g0183961 Lupinus albus HOM05D004337 ORTHO05D005422 9.0e-270 933.3 571 78.3
Nitab4.5_0000496g0240 Nicotiana tabacum HOM05D004337 ORTHO05D005422 2.0e-269 932.2 556 79.1
PGSC0003DMG400023451 Solanum tuberosum HOM05D004337 ORTHO05D005422 1.3e-268 929.5 578 76.5
MSTRG.23236 Avicennia marina HOM05D004337 ORTHO05D005422 2.5e-267 925.2 569 77.9
Lalb_Chr12g0202711 Lupinus albus HOM05D004337 ORTHO05D005422 4.2e-267 924.5 571 77.4
PSO761G0180 Papaver somniferum HOM05D004337 ORTHO05D005422 7.2e-267 923.7 570 76.5
THA.LOC104819366 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 7.2e-267 923.7 573 78.2
FAN28G1720 Fragaria x ananassa HOM05D004337 ORTHO05D005422 1.6e-266 922.5 593 75.0
TWI75G1462 Tripterygium wilfordii HOM05D004337 ORTHO05D005422 3.6e-266 921.4 570 77.5
FvH4_1g25770 Fragaria vesca HOM05D004337 ORTHO05D005422 4.6e-266 921.0 576 76.4
Oeu046358.1 Olea europaea HOM05D004337 ORTHO05D005422 6.1e-266 920.6 569 77.3
FAN23G1824 Fragaria x ananassa HOM05D004337 ORTHO05D005422 7.9e-266 920.2 593 74.9
unitig_736.g22365 Utricularia gibba HOM05D004337 ORTHO05D005422 7.9e-266 920.2 572 78.0
Lsat_1_v5_gn_2_40441 Lactuca sativa HOM05D004337 ORTHO05D005422 1.0e-265 919.8 570 76.8
Nitab4.5_0004764g0030 Nicotiana tabacum HOM05D004337 ORTHO05D005422 1.0e-265 919.8 558 78.9
FAN26G1467 Fragaria x ananassa HOM05D004337 ORTHO05D005422 1.3e-265 919.5 593 74.9
PSO210G2848 Papaver somniferum HOM05D004337 ORTHO05D005422 2.3e-265 918.7 576 75.5
ATR1089G072 Amborella trichopoda HOM05D004337 ORTHO05D005422 5.1e-265 917.5 572 77.4
Eucgr.I00018 Eucalyptus grandis HOM05D004337 ORTHO05D005422 6.7e-265 917.1 568 78.0
Thhalv10013045m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 1.5e-264 916.0 571 77.8
FAN19G0301 Fragaria x ananassa HOM05D004337 ORTHO05D005422 3.3e-264 914.8 593 74.5
RcHm_v2.0_Chr3g0484771 Rosa chinensis HOM05D004337 ORTHO05D005422 7.4e-264 913.7 548 78.8
Oeu017633.3 Olea europaea HOM05D004337 ORTHO05D005422 9.7e-264 913.3 567 76.5
VMungo1309G0234 Vigna mungo HOM05D004337 ORTHO05D005422 1.3e-263 912.9 569 77.2
Glyma.04G203800 Glycine max HOM05D004337 ORTHO05D005422 6.3e-263 910.6 568 77.3
Rhsim10G0124700 Rhododendron simsii HOM05D004337 ORTHO05D005422 8.2e-263 910.2 696 65.7
Oeu054207.1 Olea europaea HOM05D004337 ORTHO05D005422 4.1e-262 907.9 590 75.1
arahy.Tifrunner.gnm1.ann1.X1BSDH Arachis hypogaea HOM05D004337 ORTHO05D005422 5.3e-262 907.5 546 78.8
Lj1g0000957 Lotus japonicus HOM05D004337 ORTHO05D005422 9.1e-262 906.7 563 76.7
TPR.G7800 Trifolium pratense HOM05D004337 ORTHO05D005422 1.2e-261 906.4 572 75.9
Zm00001eb082160 Zea mays HOM05D004337 ORTHO05D005422 2.0e-261 905.6 558 77.6
Psat5g057120 Pisum sativum HOM05D004337 ORTHO05D005422 1.0e-260 903.3 569 75.9
CARHR204490 Cardamine hirsuta HOM05D004337 ORTHO05D005422 2.9e-260 901.7 597 74.2
Aa31LG11G2980 Aethionema arabicum HOM05D004337 ORTHO05D005422 3.8e-260 901.4 568 76.9
AL6G19170 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 5.0e-260 901.0 568 76.6
ECA238G0122 Erigeron canadensis HOM05D004337 ORTHO05D005422 1.9e-259 899.0 575 74.8
C09p68510 Brassica napus HOM05D004337 ORTHO05D005422 2.5e-259 898.7 598 73.4
A10p28250 Brassica napus HOM05D004337 ORTHO05D005422 3.2e-259 898.3 598 75.8
SGA_v2.0_scaffold12G06278 Striga asiatica HOM05D004337 ORTHO05D005422 4.2e-259 897.9 590 73.9
Medtr3g098210 Medicago truncatula HOM05D004337 ORTHO05D005422 7.2e-259 897.1 572 75.7
BraA10t44874Z Brassica rapa HOM05D004337 ORTHO05D005422 1.2e-258 896.3 572 75.7
Phvul.009G159800 Phaseolus vulgaris HOM05D004337 ORTHO05D005422 1.6e-258 896.0 576 75.3
BcaB08g37252 Brassica carinata HOM05D004337 ORTHO05D005422 2.1e-258 895.6 574 75.6
BolC9t59595H Brassica oleracea HOM05D004337 ORTHO05D005422 2.1e-258 895.6 599 73.3
Carub.0006s0742 Capsella rubella HOM05D004337 ORTHO05D005422 2.1e-258 895.6 568 76.6
Glyma.06G161400 Glycine max HOM05D004337 ORTHO05D005422 1.0e-257 893.3 556 77.3
Lj4A821G42 Lonicera japonica HOM05D004337 ORTHO05D005422 1.0e-257 893.3 552 77.9
HPP92_009218 Vanilla planifolia HOM05D004337 ORTHO05D005422 1.0e-257 893.3 575 75.7
Os04g0441900 Oryza sativa ssp. japonica HOM05D004337 ORTHO05D005422 1.4e-257 892.9 558 75.1
Zm00001eb422980 Zea mays HOM05D004337 ORTHO05D005422 1.8e-257 892.5 577 75.0
CARHR189960 Cardamine hirsuta HOM05D004337 ORTHO05D005422 3.0e-257 891.7 569 75.2
AL6G34865 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 3.9e-257 891.3 594 72.4
HanXRQChr10g0285831 Helianthus annuus HOM05D004337 ORTHO05D005422 5.1e-257 891.0 539 78.1
COL.COLO4_33529 Corchorus olitorius HOM05D004337 ORTHO05D005422 1.1e-256 889.8 569 75.7
Aa31LG3G18040 Aethionema arabicum HOM05D004337 ORTHO05D005422 2.6e-256 888.6 567 75.7
AT5G23575 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 7.4e-256 887.1 594 71.9
Carub.0006s2135 Capsella rubella HOM05D004337 ORTHO05D005422 2.2e-255 885.6 568 74.5
Thhalv10003872m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 2.2e-255 885.6 569 75.0
Nn5g27210 Nelumbo nucifera HOM05D004337 ORTHO05D005422 1.8e-254 882.5 545 77.8
Sp2g23620 Schrenkiella parvula HOM05D004337 ORTHO05D005422 4.1e-254 881.3 569 75.0
BcaB04g19858 Brassica carinata HOM05D004337 ORTHO05D005422 5.3e-254 880.9 570 74.9
A06p34530 Brassica napus HOM05D004337 ORTHO05D005422 6.9e-254 880.6 569 74.9
C09p07600 Brassica napus HOM05D004337 ORTHO05D005422 6.9e-254 880.6 569 74.7
BraA06t26382Z Brassica rapa HOM05D004337 ORTHO05D005422 2.6e-253 878.6 569 74.7
BolC9t53677H Brassica oleracea HOM05D004337 ORTHO05D005422 4.5e-253 877.9 570 74.4
BcaC04g23504 Brassica carinata HOM05D004337 ORTHO05D005422 5.9e-253 877.5 570 74.4
A09p06870 Brassica napus HOM05D004337 ORTHO05D005422 5.9e-253 877.5 570 74.2
BraA09t36334Z Brassica rapa HOM05D004337 ORTHO05D005422 1.0e-252 876.7 570 74.4
C07p43970 Brassica napus HOM05D004337 ORTHO05D005422 2.9e-252 875.2 570 74.2
BolC7t44925H Brassica oleracea HOM05D004337 ORTHO05D005422 3.8e-252 874.8 568 74.1
DCAR_009619 Daucus carota HOM05D004337 ORTHO05D005422 4.2e-251 871.3 605 72.6
SGA_v2.0_scaffold51G18842 Striga asiatica HOM05D004337 ORTHO05D005422 7.2e-251 870.5 570 75.6
Ca_17042_v3 Cicer arietinum L. HOM05D004337 ORTHO05D005422 3.6e-250 868.2 568 73.6
arahy.Tifrunner.gnm1.ann1.397MFZ Arachis hypogaea HOM05D004337 ORTHO05D005422 3.9e-249 864.8 587 72.2
Dinv10851 Davidia involucrata HOM05D004337 ORTHO05D005422 9.1e-246 853.6 519 78.8
SMO116G0204 Selaginella moellendorffii HOM05D004337 ORTHO05D005422 8.0e-242 840.5 543 73.5
Sp6g34400 Schrenkiella parvula HOM05D004337 ORTHO05D005422 6.7e-241 837.4 573 72.6
Peaxi162Scf00651g00114 Petunia axillaris HOM05D004337 ORTHO05D005422 1.2e-240 836.6 573 71.7
AT5G08500 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 1.5e-240 836.3 518 78.2
Mapoly0020s0073 Marchantia polymorpha HOM05D004337 ORTHO05D005422 5.9e-237 824.3 564 70.2
CSS0021638 Camellia sinensis var. sinensis HOM05D004337 ORTHO05D005422 7.2e-235 817.4 496 78.8
vmacro12739 Vaccinium macrocarpon HOM05D004337 ORTHO05D005422 1.8e-230 802.7 906 50.0
AL6G18970 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 5.2e-225 784.6 862 50.6
Ah.06g188230 Amaranthus hybridus HOM05D004337 ORTHO05D005422 9.2e-222 773.9 513 75.6
Gohir.D12G002000 Gossypium hirsutum HOM05D004337 ORTHO05D005422 2.0e-213 746.1 567 65.4
Duzib264G1201 Durio zibethinus HOM05D004337 ORTHO05D005422 1.4e-209 733.4 568 64.1
Pp3c5_10010 Physcomitrium patens HOM05D004337 ORTHO05D005422 2.3e-209 732.6 563 65.2
Cc00_g00820 Coffea canephora HOM05D004337 ORTHO05D005422 5.6e-203 711.4 399 84.5
CBR_g44530 Chara braunii HOM05D004337 ORTHO05D005422 4.7e-194 681.8 566 58.5
CDE05G2996 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 7.1e-190 667.9 430 74.4
Haze_19353 Corylus avellana HOM05D004337 ORTHO05D005422 7.6e-176 621.3 340 89.1
AL6G18990 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 4.9e-167 592.0 432 70.1
SHI38349 Sapria himalayana HOM05D004337 ORTHO05D005422 6.0e-157 558.5 419 69.0
Cre09.g397900 Chlamydomonas reinhardtii HOM05D004337 ORTHO05D005422 1.6e-149 533.9 580 47.2
ClCG04G002690 Citrullus lanatus HOM05D004337 ORTHO05D005422 6.1e-149 531.9 307 85.7
AL6G19200 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 3.8e-135 486.1 443 61.6
MCO10G243 Micromonas commoda HOM05D004337 ORTHO05D005422 3.2e-118 429.9 343 59.2
Haze_27034 Corylus avellana HOM05D004337 ORTHO05D005422 2.1e-101 374.0 474 42.2
PRCOL_00006172 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 7.0e-97 359.0 476 40.8
Cfa024513 Carpinus fangiana HOM05D004337 ORTHO05D005422 4.3e-94 349.7 513 36.8
Cpa.g.sc3593.1 Carica papaya HOM05D004337 ORTHO05D005422 8.9e-92 342.0 188 88.8
Cpa.g.sc138.38 Carica papaya HOM05D004337 ORTHO05D005422 1.8e-84 317.8 214 68.2
Haze_19352 Corylus avellana HOM05D004337 ORTHO05D005422 2.3e-79 300.8 202 67.3
AL6G19020 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 2.4e-76 290.8 219 66.7
MCO07G426 Micromonas commoda HOM05D004337 ORTHO05D005422 3.5e-72 276.9 602 30.9
SalBow8G1257 Salvia bowleyana HOM05D004337 ORTHO05D005422 3.3e-70 270.4 214 61.7
SalBow8G3722 Salvia bowleyana HOM05D004337 ORTHO05D005422 3.3e-70 270.4 214 61.7
ClCG04G002680 Citrullus lanatus HOM05D004337 ORTHO05D005422 1.7e-66 258.1 159 74.8
PRCOL_00005640 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 7.1e-65 252.7 365 35.1
Cc00_g00810 Coffea canephora HOM05D004337 ORTHO05D005422 2.1e-61 241.1 168 66.1
HPP92_009290 Vanilla planifolia HOM05D004337 ORTHO05D005422 1.7e-50 204.9 226 52.2
CDE05G3583 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 5.8e-43 179.9 108 81.5
Hma1.2p1_0641F.1_g194250 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 1.5e-30 138.7 72 93.1
Psat3g077400 Pisum sativum HOM05D004337 ORTHO05D005422 3.1e-28 131.0 110 56.4
BcaC04g21668 Brassica carinata HOM05D004337 ORTHO05D021976 5.5e-25 120.2 139 47.5
C09p29160 Brassica napus HOM05D004337 ORTHO05D021976 7.2e-25 119.8 135 48.1
Hma1.2p1_0641F.1_g194230 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 4.2e-17 94.0 105 51.4
AUR62044487 Chenopodium quinoa HOM05D004337 ORTHO05D021976 9.4e-17 92.8 49 79.6
AUR62044516 Chenopodium quinoa HOM05D004337 ORTHO05D021976 9.4e-17 92.8 49 79.6
SEGI_12766 Sequoiadendron giganteum HOM05D004337 ORTHO05D005422 5.2e-15 87.0 41 95.1
AUR62038356 Chenopodium quinoa HOM05D001477 ORTHO05D021976 6.7e-15 86.7 43 86.0
SHI11402 Sapria himalayana HOM05D000039 ORTHO05D006865 5.3e-12 77.0 48 68.8
CDE05G0837 Ceratophyllum demersum HOM05D004337 ORTHO05D043897 4.7e-08 63.9 48 68.8


User provided reference genes

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