Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund21710 Selenicereus undatus HOM05D000274 ORTHO05D001466 4.2e-119 431.4 224 100.0
EL10Ac4g09917 Beta vulgaris HOM05D000274 ORTHO05D001466 1.7e-48 196.8 327 40.7
AUR62005204 Chenopodium quinoa HOM05D000274 ORTHO05D001466 3.0e-48 196.1 259 47.9
AUR62000765 Chenopodium quinoa HOM05D000274 ORTHO05D001466 3.9e-48 195.7 259 47.5
Sc16g0008830 Simmondsia chinensis HOM05D000274 ORTHO05D001466 8.7e-48 194.5 331 39.6
Cpa.g.sc48.94 Carica papaya HOM05D000274 ORTHO05D001466 2.5e-47 193.0 332 40.4
GSVIVG01031146001 Vitis vinifera HOM05D000274 ORTHO05D001466 5.6e-47 191.8 331 41.1
Ah.04g161130 Amaranthus hybridus HOM05D000274 ORTHO05D001466 2.8e-46 189.5 265 41.5
Dinv40339 Davidia involucrata HOM05D000274 ORTHO05D001466 3.1e-45 186.0 331 39.0
CSS0003204 Camellia sinensis var. sinensis HOM05D000274 ORTHO05D001466 1.5e-44 183.7 331 38.7
DCAR_022148 Daucus carota HOM05D000274 ORTHO05D001466 2.6e-44 183.0 331 37.8
Hma1.2p1_1292F.1_g273720 Hydrangea macrophylla HOM05D000274 ORTHO05D001466 7.6e-44 181.4 328 38.1
CSS0049806 Camellia sinensis var. sinensis HOM05D000274 ORTHO05D001466 9.9e-44 181.0 324 38.9
Cfa006627 Carpinus fangiana HOM05D000274 ORTHO05D001466 2.2e-43 179.9 331 37.5
Nn4g25836 Nelumbo nucifera HOM05D000274 ORTHO05D001466 2.2e-43 179.9 313 37.4
Prupe.6G321000 Prunus persica HOM05D000274 ORTHO05D001466 1.1e-42 177.6 321 36.8
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 1.9e-42 176.8 328 38.1
Thecc.05G312800 Theobroma cacao HOM05D000274 ORTHO05D001466 1.9e-42 176.8 328 38.1
Nitab4.5_0003658g0080 Nicotiana tabacum HOM05D000274 ORTHO05D001466 2.4e-42 176.4 331 37.2
MELO3C004223.2 Cucumis melo HOM05D000274 ORTHO05D001466 3.2e-42 176.0 329 36.8
MD12G1213400 Malus domestica HOM05D000274 ORTHO05D001466 3.2e-42 176.0 322 36.0
PGR031G3859 Punica granatum HOM05D000274 ORTHO05D001466 4.2e-42 175.6 331 38.4
CANSAT54G2627 Cannabis sativa HOM05D000274 ORTHO05D001466 5.4e-42 175.3 331 37.8
Lj1g0011369 Lotus japonicus HOM05D000274 ORTHO05D001466 1.6e-41 173.7 330 37.6
Gohir.A11G294700 Gossypium hirsutum HOM05D000274 ORTHO05D001466 2.1e-41 173.3 324 37.0
MD04G1200900 Malus domestica HOM05D000274 ORTHO05D001466 2.1e-41 173.3 322 35.7
TAR633G0202 Trochodendron aralioides HOM05D000274 ORTHO05D001466 6.0e-41 171.8 331 36.9
Manes.08G117700 Manihot esculenta HOM05D000274 ORTHO05D001466 7.9e-41 171.4 328 36.0
COL.COLO4_10517 Corchorus olitorius HOM05D000274 ORTHO05D001466 1.0e-40 171.0 332 37.0
FAN02G0716 Fragaria x ananassa HOM05D000274 ORTHO05D001466 1.0e-40 171.0 332 35.8
FAN05G4255 Fragaria x ananassa HOM05D000274 ORTHO05D001466 1.0e-40 171.0 332 36.1
Eucgr.H04533 Eucalyptus grandis HOM05D000274 ORTHO05D001466 1.3e-40 170.6 334 37.7
VMungo0540G1623 Vigna mungo HOM05D000274 ORTHO05D001466 1.3e-40 170.6 311 35.4
Cc02_g34110 Coffea canephora HOM05D000274 ORTHO05D001466 1.7e-40 170.2 331 37.2
Gohir.D11G309400 Gossypium hirsutum HOM05D000274 ORTHO05D001466 2.3e-40 169.9 324 36.7
Gorai.007G341400 Gossypium raimondii HOM05D000274 ORTHO05D001466 2.3e-40 169.9 324 36.7
Nitab4.5_0004891g0010 Nicotiana tabacum HOM05D000274 ORTHO05D001466 2.3e-40 169.9 259 42.1
CiPaw.08G162000 Carya illinoinensis HOM05D000274 ORTHO05D001466 3.9e-40 169.1 331 36.3
TWI56G0958 Tripterygium wilfordii HOM05D000274 ORTHO05D001466 3.9e-40 169.1 328 37.8
RcHm_v2.0_Chr3g0455701 Rosa chinensis HOM05D000274 ORTHO05D001466 5.1e-40 168.7 332 35.5
SalBow7G4273 Salvia bowleyana HOM05D000274 ORTHO05D001466 5.1e-40 168.7 253 43.9
Solyc01g099690.3 Solanum lycopersicum HOM05D000274 ORTHO05D001466 6.6e-40 168.3 270 40.7
QL03p020996 Quercus lobata HOM05D000274 ORTHO05D001466 1.1e-39 167.5 330 36.1
QL03p021872 Quercus lobata HOM05D000274 ORTHO05D001466 1.1e-39 167.5 330 36.1
Sopen01g043210 Solanum pennellii HOM05D000274 ORTHO05D001466 1.1e-39 167.5 270 40.4
Migut.B01019 Erythranthe guttata HOM05D000274 ORTHO05D001466 1.5e-39 167.2 331 35.6
SpUn0237_0010 Schrenkiella parvula HOM05D000274 ORTHO05D001466 1.9e-39 166.8 262 42.0
SpUn0301_0010 Schrenkiella parvula HOM05D000274 ORTHO05D001466 1.9e-39 166.8 262 42.0
FvH4_6g06550 Fragaria vesca HOM05D000274 ORTHO05D001466 2.5e-39 166.4 332 35.5
BolC8t48885H Brassica oleracea HOM05D000274 ORTHO05D001466 4.3e-39 165.6 259 42.1
Carub.0001s0842 Capsella rubella HOM05D000274 ORTHO05D001466 4.3e-39 165.6 333 36.3
Lsat_1_v5_gn_9_124360 Lactuca sativa HOM05D000274 ORTHO05D001466 4.3e-39 165.6 328 35.4
BcaC07g38478 Brassica carinata HOM05D000274 ORTHO05D001466 5.6e-39 165.2 259 41.7
C08p12450 Brassica napus HOM05D000274 ORTHO05D001466 5.6e-39 165.2 259 41.7
HanXRQChr03g0071301 Helianthus annuus HOM05D000274 ORTHO05D001466 5.6e-39 165.2 315 36.2
unitig_32.g11157 Utricularia gibba HOM05D000274 ORTHO05D001466 5.6e-39 165.2 349 34.4
FAN14G2027 Fragaria x ananassa HOM05D000274 ORTHO05D001466 7.4e-39 164.9 336 35.1
Glyma.19G233600 Glycine max HOM05D000274 ORTHO05D001466 7.4e-39 164.9 324 35.2
PSO210G4713 Papaver somniferum HOM05D000274 ORTHO05D001466 7.4e-39 164.9 332 35.8
AT1G09130 Arabidopsis thaliana HOM05D000274 ORTHO05D001466 9.6e-39 164.5 262 42.0
CAN.G1459.9 Capsicum annuum HOM05D000274 ORTHO05D001466 9.6e-39 164.5 331 35.3
Glyma.03G235800 Glycine max HOM05D000274 ORTHO05D001466 9.6e-39 164.5 322 34.8
PSO832G3347 Papaver somniferum HOM05D000274 ORTHO05D001466 9.6e-39 164.5 332 35.8
AL1G19570 Arabidopsis lyrata HOM05D000274 ORTHO05D001466 2.1e-38 163.3 262 42.0
MSTRG.20419 Avicennia marina HOM05D000274 ORTHO05D001466 2.1e-38 163.3 331 36.0
A08p34810 Brassica napus HOM05D000274 ORTHO05D001466 3.6e-38 162.5 259 40.9
BraA08t35392Z Brassica rapa HOM05D000274 ORTHO05D001466 3.6e-38 162.5 259 40.9
Thhalv10008180m.g Eutrema salsugineum HOM05D000274 ORTHO05D001466 3.6e-38 162.5 259 40.2
Potri.013G017166 Populus trichocarpa HOM05D000274 ORTHO05D001466 3.6e-38 162.5 335 35.5
CARHR009000 Cardamine hirsuta HOM05D000274 ORTHO05D001466 4.8e-38 162.2 261 41.4
Atru.chr2.28 Acer truncatum HOM05D000274 ORTHO05D001466 6.2e-38 161.8 329 36.5
Lalb_Chr18g0045741 Lupinus albus HOM05D000274 ORTHO05D001466 8.1e-38 161.4 328 35.4
CsaV3_2G006650 Cucumis sativus L. HOM05D000274 ORTHO05D001466 1.1e-37 161.0 332 34.6
Sed0017660 Sechium edule HOM05D000274 ORTHO05D001466 1.1e-37 161.0 331 35.0
Aa31sc55G130 Aethionema arabicum HOM05D000274 ORTHO05D001466 1.4e-37 160.6 264 41.7
THA.LOC104820780 Tarenaya hassleriana HOM05D000274 ORTHO05D001466 1.4e-37 160.6 262 40.8
Phvul.006G089800 Phaseolus vulgaris HOM05D000274 ORTHO05D001466 1.8e-37 160.2 331 35.3
ClCG02G015430 Citrullus lanatus HOM05D000274 ORTHO05D001466 1.5e-36 157.1 351 33.0
BcaC05g24762 Brassica carinata HOM05D000274 ORTHO05D001466 4.5e-36 155.6 267 39.7
Hma1.2p1_1292F.1_g273730 Hydrangea macrophylla HOM05D000274 ORTHO05D001466 4.5e-36 155.6 297 37.4
ClCG00G001990 Citrullus lanatus HOM05D000274 ORTHO05D001466 3.8e-35 152.5 345 32.8
C05p07120 Brassica napus HOM05D000274 ORTHO05D001466 6.4e-35 151.8 258 40.7
MBI18_g21820_MAGBIO Magnolia biondii HOM05D000274 ORTHO05D001466 6.4e-35 151.8 313 34.8
ATR0796G121 Amborella trichopoda HOM05D000274 ORTHO05D001466 1.4e-34 150.6 286 36.0
Ca_05801_v3 Cicer arietinum L. HOM05D000274 ORTHO05D001466 5.5e-34 148.7 246 37.8
Duzib106G1487 Durio zibethinus HOM05D000274 ORTHO05D001466 7.1e-34 148.3 259 39.4
Ciclev10003175m.g Citrus clementina HOM05D000274 ORTHO05D001466 2.7e-33 146.4 327 35.2
Psat0s27g0160 Pisum sativum HOM05D000274 ORTHO05D001466 3.5e-33 146.0 260 37.3
Sabra13G0016000 Salix brachista HOM05D000274 ORTHO05D001466 6.0e-33 145.2 361 32.1
ECA240G0135 Erigeron canadensis HOM05D000274 ORTHO05D001466 1.0e-32 144.4 280 35.0
CDE08G0842 Ceratophyllum demersum HOM05D000274 ORTHO05D001466 3.9e-32 142.5 320 33.4
Haze_04141 Corylus avellana HOM05D000274 ORTHO05D001466 1.1e-31 141.0 422 28.9
TPR.G33238 Trifolium pratense HOM05D000274 ORTHO05D001466 1.9e-31 140.2 254 37.8
CDE02G0083 Ceratophyllum demersum HOM05D000274 ORTHO05D001466 3.3e-31 139.4 320 32.8
Lj5A420G20 Lonicera japonica HOM05D000274 ORTHO05D001466 5.6e-31 138.7 278 34.9
BolC5t29467H Brassica oleracea HOM05D000274 ORTHO05D001466 7.4e-31 138.3 241 40.2
Medtr7g112640 Medicago truncatula HOM05D000274 ORTHO05D001466 2.1e-30 136.7 253 37.2
Dinv30808 Davidia involucrata HOM05D000274 ORTHO05D001466 4.5e-28 129.0 136 54.4
Oeu043352.1 Olea europaea HOM05D000274 ORTHO05D001466 4.2e-26 122.5 136 54.4
Zm00001eb016570 Zea mays HOM05D000274 ORTHO05D001466 1.8e-24 117.1 326 30.7
Os03g0344900 Oryza sativa ssp. japonica HOM05D000274 ORTHO05D001466 3.9e-24 115.9 327 31.5
Mapoly0091s0025 Marchantia polymorpha HOM05D000274 ORTHO05D001466 2.5e-23 113.2 245 35.5
AagrBONN_evm.TU.Sc2ySwM_117.1621 Anthoceros agrestis HOM05D000274 ORTHO05D001466 3.3e-23 112.8 251 35.9
Pp3c3_12000 Physcomitrium patens HOM05D000274 ORTHO05D001466 9.6e-23 111.3 212 36.3
MBI18_g13691_MAGBIO Magnolia biondii HOM05D000274 ORTHO05D001466 9.0e-21 104.8 351 29.1
Aqoxy5G00726 Aquilegia oxysepala HOM05D000274 ORTHO05D001466 1.2e-20 104.4 270 33.0
EL10Ac7g18141 Beta vulgaris HOM05D000274 ORTHO05D001466 3.0e-16 89.7 101 52.5
Nitab4.5_0002144g0010 Nicotiana tabacum HOM05D000274 ORTHO05D001466 1.1e-15 87.8 88 52.3
SMO203G0119 Selaginella moellendorffii HOM05D000274 ORTHO05D001466 1.5e-15 87.4 232 29.3
Pp3c13_21640 Physcomitrium patens HOM05D000274 ORTHO05D001466 1.6e-14 84.0 178 35.4
SMO357G0005 Selaginella moellendorffii HOM05D000274 ORTHO05D001466 1.1e-13 81.3 221 28.1
A08p08900 Brassica napus HOM05D000274 ORTHO05D001466 1.5e-12 77.4 138 38.4
HPP92_013710 Vanilla planifolia HOM05D000274 ORTHO05D001466 2.0e-12 77.0 63 58.7
Lsat_1_v5_gn_6_103521 Lactuca sativa HOM05D000274 ORTHO05D001466 1.7e-11 73.9 74 47.3
SGA_v2.0_scaffold36G14398 Striga asiatica HOM05D000274 ORTHO05D001466 3.8e-11 72.8 258 28.7
Nitab4.5_0007009g0030 Nicotiana tabacum HOM05D000274 ORTHO05D001466 5.0e-11 72.4 136 39.0
Actinidia21494 Actinidia chinensis HOM05D000274 ORTHO05D001466 1.4e-10 70.9 58 58.6
vmacro19746 Vaccinium macrocarpon HOM05D000274 ORTHO05D001466 3.2e-10 69.7 63 54.0
DCAR_003354 Daucus carota HOM05D000274 ORTHO05D001466 4.2e-10 69.3 55 61.8
MCO01G248 Micromonas commoda HOM05D000274 ORTHO05D001466 5.5e-10 68.9 64 50.0
Rhsim05G0139000 Rhododendron simsii HOM05D000274 ORTHO05D001466 3.0e-08 63.2 68 48.5
HPP92_026814 Vanilla planifolia HOM05D000274 ORTHO05D001466 7.4e-07 58.5 87 41.4
TWI77G0317 Tripterygium wilfordii HOM05D000274 ORTHO05D001466 2.8e-06 56.6 46 58.7


User provided reference genes

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