Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund21687 Selenicereus undatus HOM05D004239 ORTHO05D005191 1.6e-211 739.2 388 100.0
EL10Ac4g09340 Beta vulgaris HOM05D004239 ORTHO05D005191 2.9e-168 595.5 387 79.6
AUR62005132 Chenopodium quinoa HOM05D004239 ORTHO05D005191 1.5e-164 583.2 382 79.1
Manes.08G122300 Manihot esculenta HOM05D004239 ORTHO05D005191 1.2e-161 573.5 385 75.8
CiPaw.07G016500 Carya illinoinensis HOM05D004239 ORTHO05D005191 1.6e-161 573.2 386 77.7
Dinv40275 Davidia involucrata HOM05D004239 ORTHO05D005191 5.9e-161 571.2 386 76.9
Cfa006576 Carpinus fangiana HOM05D004239 ORTHO05D005191 3.8e-160 568.5 386 75.9
AUR62000841 Chenopodium quinoa HOM05D004239 ORTHO05D005191 6.5e-160 567.8 393 76.6
Manes.09G165700 Manihot esculenta HOM05D004239 ORTHO05D005191 3.2e-159 565.5 385 76.6
Prupe.6G327600 Prunus persica HOM05D004239 ORTHO05D005191 4.2e-159 565.1 383 75.7
Oeu027738.1 Olea europaea HOM05D004239 ORTHO05D005191 7.2e-159 564.3 386 75.1
Cc00_g15600 Coffea canephora HOM05D004239 ORTHO05D005191 1.6e-158 563.1 385 75.6
Eucgr.B01993 Eucalyptus grandis HOM05D004239 ORTHO05D005191 1.6e-158 563.1 387 76.2
QL03p006503 Quercus lobata HOM05D004239 ORTHO05D005191 2.1e-158 562.8 386 74.9
Oeu038249.1 Olea europaea HOM05D004239 ORTHO05D005191 3.6e-158 562.0 386 75.1
TAR636G0428 Trochodendron aralioides HOM05D004239 ORTHO05D005191 8.0e-158 560.8 384 76.3
Haze_04207 Corylus avellana HOM05D004239 ORTHO05D005191 1.8e-157 559.7 386 75.1
Potri.005G035300 Populus trichocarpa HOM05D004239 ORTHO05D005191 1.8e-157 559.7 386 75.4
FvH4_6g05650 Fragaria vesca HOM05D004239 ORTHO05D005191 3.0e-157 558.9 386 74.1
RcHm_v2.0_Chr3g0454501 Rosa chinensis HOM05D004239 ORTHO05D005191 6.7e-157 557.8 386 74.6
GSVIVG01000037001 Vitis vinifera HOM05D004239 ORTHO05D005191 2.6e-156 555.8 388 74.7
Peaxi162Scf00037g00226 Petunia axillaris HOM05D004239 ORTHO05D005191 7.5e-156 554.3 385 74.0
MD12G1220700 Malus domestica HOM05D004239 ORTHO05D005191 1.3e-155 553.5 386 73.3
Potri.013G024000 Populus trichocarpa HOM05D004239 ORTHO05D005191 1.7e-155 553.1 386 74.6
Ca_09364_v3 Cicer arietinum L. HOM05D004239 ORTHO05D005191 2.8e-155 552.4 384 75.0
SGA_v2.0_scaffold81G26082 Striga asiatica HOM05D004239 ORTHO05D005191 2.8e-155 552.4 385 74.0
PSO063G4628 Papaver somniferum HOM05D004239 ORTHO05D005191 3.7e-155 552.0 388 74.0
CANSAT54G0620 Cannabis sativa HOM05D004239 ORTHO05D005191 6.3e-155 551.2 386 75.1
Rhsim05G0142700 Rhododendron simsii HOM05D004239 ORTHO05D005191 8.2e-155 550.8 385 74.8
MSTRG.5107 Avicennia marina HOM05D004239 ORTHO05D005191 1.8e-154 549.7 386 73.8
Nn4g26228 Nelumbo nucifera HOM05D004239 ORTHO05D005191 3.1e-154 548.9 390 72.8
PGSC0003DMG401028586 Solanum tuberosum HOM05D004239 ORTHO05D005191 4.1e-154 548.5 387 73.4
MD04G1206900 Malus domestica HOM05D004239 ORTHO05D005191 5.3e-154 548.1 386 72.5
Nitab4.5_0005388g0060 Nicotiana tabacum HOM05D004239 ORTHO05D005191 5.3e-154 548.1 385 74.3
Actinidia23624 Actinidia chinensis HOM05D004239 ORTHO05D005191 9.1e-154 547.4 386 73.8
vmacro19629 Vaccinium macrocarpon HOM05D004239 ORTHO05D005191 1.2e-153 547.0 390 73.3
Solyc01g098840.3 Solanum lycopersicum HOM05D004239 ORTHO05D005191 2.0e-153 546.2 387 73.4
Migut.N01997 Erythranthe guttata HOM05D004239 ORTHO05D005191 2.7e-153 545.8 386 73.3
Sopen01g042380 Solanum pennellii HOM05D004239 ORTHO05D005191 3.5e-153 545.4 387 72.9
Cpa.g.sc48.35 Carica papaya HOM05D004239 ORTHO05D005191 4.5e-153 545.0 383 73.6
Glyma.03G239000 Glycine max HOM05D004239 ORTHO05D005191 5.9e-153 544.7 383 73.1
TPR.G33198 Trifolium pratense HOM05D004239 ORTHO05D005191 5.9e-153 544.7 388 74.2
Medtr7g113660 Medicago truncatula HOM05D004239 ORTHO05D005191 3.8e-152 542.0 384 73.4
SalBow3G0110 Salvia bowleyana HOM05D004239 ORTHO05D005191 8.5e-152 540.8 385 72.5
Nn1g02198 Nelumbo nucifera HOM05D004239 ORTHO05D005191 1.1e-151 540.4 388 71.9
Phvul.006G092900 Phaseolus vulgaris HOM05D004239 ORTHO05D005191 4.2e-151 538.5 383 72.8
Lalb_Chr04g0260811 Lupinus albus HOM05D004239 ORTHO05D005191 7.2e-151 537.7 383 73.4
TWI12G0310 Tripterygium wilfordii HOM05D004239 ORTHO05D005191 9.4e-151 537.3 387 72.1
vmacro23128 Vaccinium macrocarpon HOM05D004239 ORTHO05D005191 2.7e-150 535.8 384 72.1
CAN.G1077.21 Capsicum annuum HOM05D004239 ORTHO05D005191 4.7e-150 535.0 387 71.3
Lj9A25G19 Lonicera japonica HOM05D004239 ORTHO05D005191 4.7e-150 535.0 381 72.7
Lj9A26G17 Lonicera japonica HOM05D004239 ORTHO05D005191 4.7e-150 535.0 381 72.7
TWI36G1635 Tripterygium wilfordii HOM05D004239 ORTHO05D005191 8.0e-150 534.3 388 72.7
Psat3g010600 Pisum sativum HOM05D004239 ORTHO05D005191 1.0e-149 533.9 384 72.4
unitig_0.g2376 Utricularia gibba HOM05D004239 ORTHO05D005191 1.0e-149 533.9 386 72.0
Aqoxy2G03302 Aquilegia oxysepala HOM05D004239 ORTHO05D005191 2.3e-149 532.7 388 71.4
Ciclev10001383m.g Citrus clementina HOM05D004239 ORTHO05D005191 2.3e-149 532.7 376 73.4
Nitab4.5_0009323g0010 Nicotiana tabacum HOM05D004239 ORTHO05D005191 8.8e-149 530.8 384 71.6
Sed0006954 Sechium edule HOM05D004239 ORTHO05D005191 8.8e-149 530.8 383 72.1
Sabra13G0025600 Salix brachista HOM05D004239 ORTHO05D005191 1.2e-148 530.4 404 69.6
FAN14G2823 Fragaria x ananassa HOM05D004239 ORTHO05D005191 9.8e-148 527.3 386 71.0
VMungo0540G1286 Vigna mungo HOM05D004239 ORTHO05D005191 9.8e-148 527.3 384 72.4
arahy.Tifrunner.gnm1.ann1.VWT09S Arachis hypogaea HOM05D004239 ORTHO05D005191 1.8e-146 523.1 385 72.5
CsaV3_2G005140 Cucumis sativus L. HOM05D004239 ORTHO05D005191 1.8e-146 523.1 384 71.4
Sed0007278 Sechium edule HOM05D004239 ORTHO05D005191 3.1e-146 522.3 382 70.7
FAN05G5256 Fragaria x ananassa HOM05D004239 ORTHO05D005191 4.1e-146 521.9 386 70.5
Peaxi162Scf00471g00018 Petunia axillaris HOM05D004239 ORTHO05D005191 7.0e-146 521.2 384 70.1
MELO3C004278.2 Cucumis melo HOM05D004239 ORTHO05D005191 9.1e-146 520.8 384 70.8
Sc09g0003220 Simmondsia chinensis HOM05D004239 ORTHO05D005191 9.1e-146 520.8 348 79.3
CSS0041428 Camellia sinensis var. sinensis HOM05D004239 ORTHO05D005191 4.5e-145 518.5 386 72.3
ClCG02G015900 Citrullus lanatus HOM05D004239 ORTHO05D005191 2.9e-144 515.8 383 71.3
Lsat_1_v5_gn_4_139401 Lactuca sativa HOM05D004239 ORTHO05D005191 2.9e-144 515.8 386 69.7
DCAR_029425 Daucus carota HOM05D004239 ORTHO05D005191 6.6e-144 514.6 386 69.7
FAN02G3565 Fragaria x ananassa HOM05D004239 ORTHO05D005191 1.1e-143 513.8 418 66.3
PGR083G1755 Punica granatum HOM05D004239 ORTHO05D005191 2.5e-143 512.7 385 71.9
FAN14G1612 Fragaria x ananassa HOM05D004239 ORTHO05D005191 3.3e-143 512.3 418 65.8
Dinv23953 Davidia involucrata HOM05D004239 ORTHO05D005191 5.5e-143 511.5 360 73.9
ECA234G2741 Erigeron canadensis HOM05D004239 ORTHO05D005191 7.2e-143 511.1 389 69.4
arahy.Tifrunner.gnm1.ann1.5NK7V3 Arachis hypogaea HOM05D004239 ORTHO05D005191 2.8e-142 509.2 409 68.2
THA.LOC104802807 Tarenaya hassleriana HOM05D004239 ORTHO05D005191 4.7e-142 508.4 385 69.9
FAN09G3705 Fragaria x ananassa HOM05D004239 ORTHO05D005191 3.0e-141 505.8 418 65.6
FAN05G0638 Fragaria x ananassa HOM05D004239 ORTHO05D005191 6.8e-141 504.6 418 65.1
A09p05280 Brassica napus HOM05D004239 ORTHO05D005191 8.9e-141 504.2 386 68.1
TAR365G0701 Trochodendron aralioides HOM05D004239 ORTHO05D005191 2.6e-140 502.7 355 74.1
BraA09t36167Z Brassica rapa HOM05D004239 ORTHO05D005191 5.7e-140 501.5 385 68.3
BcaB04g19671 Brassica carinata HOM05D004239 ORTHO05D005191 7.5e-140 501.1 387 67.4
A02p38630 Brassica napus HOM05D004239 ORTHO05D005191 4.9e-139 498.4 385 68.3
Thhalv10004396m.g Eutrema salsugineum HOM05D004239 ORTHO05D005191 8.3e-139 497.7 385 68.1
C09p05760 Brassica napus HOM05D004239 ORTHO05D005191 1.1e-138 497.3 385 67.8
HanXRQChr09g0259671 Helianthus annuus HOM05D004239 ORTHO05D005191 1.4e-138 496.9 385 68.3
Sp2g20670 Schrenkiella parvula HOM05D004239 ORTHO05D005191 2.4e-138 496.1 385 68.3
Lj1g0017751 Lotus japonicus HOM05D004239 ORTHO05D005191 3.1e-138 495.7 349 73.4
BraA02t08839Z Brassica rapa HOM05D004239 ORTHO05D005191 9.2e-138 494.2 385 67.8
BcaC04g23678 Brassica carinata HOM05D004239 ORTHO05D005191 2.0e-137 493.0 386 67.4
BolC2t11880H Brassica oleracea HOM05D004239 ORTHO05D005191 2.0e-137 493.0 385 67.3
BolC9t53503H Brassica oleracea HOM05D004239 ORTHO05D005191 2.0e-137 493.0 386 67.4
C02p58120 Brassica napus HOM05D004239 ORTHO05D005191 7.8e-137 491.1 385 67.3
Gohir.A11G295900 Gossypium hirsutum HOM05D004239 ORTHO05D005191 7.8e-137 491.1 381 65.6
Actinidia19795 Actinidia chinensis HOM05D004239 ORTHO05D005191 3.8e-136 488.8 334 76.0
Gorai.007G342800 Gossypium raimondii HOM05D004239 ORTHO05D005191 6.6e-136 488.0 381 65.4
Duzib106G0174 Durio zibethinus HOM05D004239 ORTHO05D005191 1.1e-135 487.3 384 63.5
Carub.0006s2508 Capsella rubella HOM05D004239 ORTHO05D005191 3.3e-135 485.7 385 67.5
Gohir.D11G311000 Gossypium hirsutum HOM05D004239 ORTHO05D005191 3.3e-135 485.7 381 65.1
Aa31LG11G9210 Aethionema arabicum HOM05D004239 ORTHO05D005191 4.3e-135 485.3 386 66.8
ATR0561G047 Amborella trichopoda HOM05D004239 ORTHO05D005191 4.7e-134 481.9 381 66.9
Thecc.05G305000 Theobroma cacao HOM05D004239 ORTHO05D005191 2.3e-133 479.6 385 62.6
AT5G27450 Arabidopsis thaliana HOM05D004239 ORTHO05D005191 3.1e-133 479.2 385 66.8
AL6G39560 Arabidopsis lyrata HOM05D004239 ORTHO05D005191 1.2e-132 477.2 385 66.8
CARHR186060 Cardamine hirsuta HOM05D004239 ORTHO05D005191 3.0e-128 462.6 385 64.4
Os10g0329300 Oryza sativa ssp. japonica HOM05D004239 ORTHO05D005191 3.9e-128 462.2 392 63.3
Glyma.19G236200 Glycine max HOM05D004239 ORTHO05D005191 2.5e-127 459.5 332 70.2
BcaC03g17788 Brassica carinata HOM05D004239 ORTHO05D005191 2.0e-124 449.9 385 63.6
ClCG10G005450 Citrullus lanatus HOM05D004239 ORTHO05D005191 3.7e-123 445.7 385 63.6
Zm00001eb209270 Zea mays HOM05D004239 ORTHO05D005191 9.2e-122 441.0 389 60.4
Zm00001eb209470 Zea mays HOM05D004239 ORTHO05D005191 6.0e-121 438.3 378 61.6
SEGI_00819 Sequoiadendron giganteum HOM05D004239 ORTHO05D005191 8.6e-120 434.5 388 59.8
Lsat_1_v5_gn_2_64361 Lactuca sativa HOM05D004239 ORTHO05D005191 3.3e-119 432.6 400 59.2
Sed0017775 Sechium edule HOM05D004239 ORTHO05D005191 9.5e-119 431.0 397 61.0
Nitab4.5_0002031g0070 Nicotiana tabacum HOM05D004239 ORTHO05D005191 1.4e-114 417.2 385 60.0
SHI18197 Sapria himalayana HOM05D004239 ORTHO05D005191 6.6e-112 408.3 390 55.4
Gorai.007G296000 Gossypium raimondii HOM05D004239 ORTHO05D005191 2.8e-110 402.9 383 56.9
CDE02G3721 Ceratophyllum demersum HOM05D004239 ORTHO05D005191 2.5e-103 379.8 297 63.3
Gohir.D11G274300 Gossypium hirsutum HOM05D004239 ORTHO05D005191 2.8e-102 376.3 383 55.4
MELO3C004281.2 Cucumis melo HOM05D004239 ORTHO05D005191 1.4e-93 347.4 271 67.2
Pp3c22_490 Physcomitrium patens HOM05D004239 ORTHO05D005191 1.3e-91 340.9 414 48.8
Mapoly0214s0007 Marchantia polymorpha HOM05D004239 ORTHO05D005191 4.8e-86 322.4 436 44.3
AagrBONN_evm.TU.Sc2ySwM_368.2263 Anthoceros agrestis HOM05D004239 ORTHO05D005191 1.2e-84 317.8 368 48.6
Actinidia05711 Actinidia chinensis HOM05D004239 ORTHO05D005191 9.3e-82 308.1 222 70.7
RcHm_v2.0_Chr7g0220931 Rosa chinensis HOM05D004239 ORTHO05D005191 2.3e-80 303.5 299 58.2
HPP92_020860 Vanilla planifolia HOM05D004239 ORTHO05D005191 2.5e-74 283.5 265 59.2
SMO347G0436 Selaginella moellendorffii HOM05D004239 ORTHO05D005191 1.4e-69 267.7 386 43.0
CBR_g3053 Chara braunii HOM05D004239 ORTHO05D005191 5.1e-64 249.2 463 36.9
CSS0049885 Camellia sinensis var. sinensis HOM05D004239 ORTHO05D005191 7.9e-57 225.3 167 70.1
Nitab4.5_0000327g0030 Nicotiana tabacum HOM05D004239 ORTHO05D005191 2.2e-51 207.2 142 74.6
SMO167G0025 Selaginella moellendorffii HOM05D004239 ORTHO05D005191 2.2e-51 207.2 245 47.3
Cfa007056 Carpinus fangiana HOM05D004239 ORTHO05D005191 2.0e-47 194.1 152 71.1
RcHm_v2.0_Chr3g0454481 Rosa chinensis HOM05D004239 ORTHO05D005191 5.2e-40 169.5 126 71.4
vmacro05023 Vaccinium macrocarpon HOM05D004239 ORTHO05D005191 2.0e-36 157.5 173 55.5
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 7.7e-36 155.6 390 31.0
RcHm_v2.0_Chr7g0220941 Rosa chinensis HOM05D004239 ORTHO05D005191 1.8e-29 134.4 87 78.2
COL.COLO4_16926 Corchorus olitorius HOM05D004239 ORTHO05D005191 7.7e-28 129.0 108 62.0
Lj5A557T20 Lonicera japonica HOM05D004239 ORTHO05D005191 3.3e-26 123.6 155 49.7
Zm00001eb063950 Zea mays HOM05D004239 ORTHO05D005191 5.5e-26 122.9 166 43.4
AagrBONN_evm.TU.Sc2ySwM_117.3520 Anthoceros agrestis HOM05D004239 ORTHO05D005191 3.6e-25 120.2 213 38.5
Actinidia05710 Actinidia chinensis HOM05D004239 ORTHO05D005191 1.8e-24 117.9 77 74.0
Lj5A555G9 Lonicera japonica HOM05D004239 ORTHO05D005191 8.9e-24 115.5 138 52.2
Lj5A556G14 Lonicera japonica HOM05D004239 ORTHO05D005191 2.9e-22 110.5 120 55.0
Lj5A558T15 Lonicera japonica HOM05D004239 ORTHO05D005191 2.9e-19 100.5 82 59.8
Lj5A557G19 Lonicera japonica HOM05D004239 ORTHO05D005191 1.9e-18 97.8 82 57.3
Lsat_1_v5_gn_7_76161 Lactuca sativa HOM05D004239 ORTHO05D005191 2.5e-18 97.4 72 63.9
Lj5A552G14 Lonicera japonica HOM05D004239 ORTHO05D005191 1.0e-16 92.0 82 56.1
Lj5A558T16 Lonicera japonica HOM05D004239 ORTHO05D005191 1.4e-16 91.7 125 48.0
Lj5A549T14 Lonicera japonica HOM05D004239 ORTHO05D005191 4.0e-16 90.1 125 48.0
Lj5A550T6 Lonicera japonica HOM05D004239 ORTHO05D005191 1.2e-12 78.6 121 45.5
Zm00001eb252600 Zea mays HOM05D004239 ORTHO05D005191 7.8e-12 75.9 106 41.5
Zm00001eb193770 Zea mays HOM05D004239 ORTHO05D445176 2.3e-11 74.3 82 47.6
arahy.Tifrunner.gnm1.ann1.04YHM3 Arachis hypogaea HOM05D004239 ORTHO05D005191 2.5e-10 70.9 97 49.5
COL.COLO4_16925 Corchorus olitorius HOM05D004239 ORTHO05D005191 1.6e-09 68.2 51 58.8
Zm00001eb313220 Zea mays HOM05D004239 ORTHO05D005191 1.6e-09 68.2 81 46.9
CiPaw.07G016300 Carya illinoinensis HOM05D006625 ORTHO05D008060 5.2e-08 63.2 40 85.0
RcHm_v2.0_Chr3g0454471 Rosa chinensis HOM05D004239 ORTHO05D005191 8.9e-08 62.4 36 80.6
Potri.015G125201 Populus trichocarpa HOM05D004239 ORTHO05D005191 3.4e-07 60.5 51 54.9
Zm00001eb342830 Zea mays HOM05D004239 ORTHO05D005191 2.9e-06 57.4 39 71.8
Oeu038248.1 Olea europaea HOM05D004239 ORTHO05D288322 3.7e-06 57.0 38 78.9
CBR_g19142 Chara braunii HOM05D007151 ORTHO05D009056 4.9e-06 56.6 94 34.0


User provided reference genes

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