Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 3.1e-139 498.4 246 100.0
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 1.7e-44 183.7 107 83.2
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 8.3e-44 181.4 105 81.9
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 3.2e-43 179.5 92 91.3
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 1.6e-39 167.2 97 80.4
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 2.8e-39 166.4 98 75.5
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 6.2e-39 165.2 107 73.8
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 8.1e-39 164.9 107 70.1
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 1.8e-38 163.7 107 69.2
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 3.1e-38 162.9 97 74.2
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 3.1e-38 162.9 98 74.5
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 4.0e-38 162.5 106 68.9
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 4.0e-38 162.5 97 74.2
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 5.2e-38 162.2 97 75.3
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 5.2e-38 162.2 103 71.8
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 5.2e-38 162.2 94 78.7
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 6.8e-38 161.8 106 68.9
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 8.9e-38 161.4 100 74.0
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 8.9e-38 161.4 93 76.3
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 8.9e-38 161.4 94 75.5
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 8.9e-38 161.4 102 73.5
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 8.9e-38 161.4 101 72.3
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 1.2e-37 161.0 94 73.4
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 1.2e-37 161.0 94 73.4
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 1.2e-37 161.0 105 69.5
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 1.2e-37 161.0 99 74.7
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 1.2e-37 161.0 94 74.5
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 1.5e-37 160.6 94 74.5
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 1.5e-37 160.6 94 74.5
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 1.5e-37 160.6 94 74.5
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 1.5e-37 160.6 103 70.9
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 1.5e-37 160.6 95 75.8
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 2.0e-37 160.2 104 71.2
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 2.0e-37 160.2 105 70.5
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 2.6e-37 159.8 94 73.4
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 2.6e-37 159.8 102 73.5
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 2.6e-37 159.8 106 70.8
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 2.6e-37 159.8 98 71.4
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 4.4e-37 159.1 103 69.9
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 5.8e-37 158.7 94 72.3
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 5.8e-37 158.7 94 72.3
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 5.8e-37 158.7 92 75.0
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 7.6e-37 158.3 88 83.0
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 9.9e-37 157.9 107 66.4
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 9.9e-37 157.9 97 74.2
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 9.9e-37 157.9 105 68.6
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 9.9e-37 157.9 100 72.0
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 1.3e-36 157.5 103 73.8
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 2.2e-36 156.8 93 75.3
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 2.9e-36 156.4 94 71.3
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 2.9e-36 156.4 94 71.3
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 2.9e-36 156.4 94 73.4
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 2.9e-36 156.4 107 68.2
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 2.9e-36 156.4 94 73.4
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 3.8e-36 156.0 96 71.9
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 3.8e-36 156.0 88 79.5
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 4.9e-36 155.6 92 72.8
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 6.4e-36 155.2 88 80.7
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 8.4e-36 154.8 94 73.4
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 1.1e-35 154.5 92 72.8
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 1.1e-35 154.5 92 72.8
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 1.1e-35 154.5 87 80.5
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 1.1e-35 154.5 104 67.3
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 1.4e-35 154.1 113 68.1
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 1.9e-35 153.7 102 66.7
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 2.4e-35 153.3 87 80.5
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 2.4e-35 153.3 95 71.6
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 3.2e-35 152.9 92 73.9
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 4.1e-35 152.5 95 70.5
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 9.2e-35 151.4 107 64.5
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 1.6e-34 150.6 79 91.1
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 2.1e-34 150.2 95 69.5
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 2.1e-34 150.2 100 70.0
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 4.6e-34 149.1 94 72.3
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 6.0e-34 148.7 95 69.5
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 6.0e-34 148.7 95 69.5
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 6.0e-34 148.7 104 67.3
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 1.3e-33 147.5 94 71.3
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.3e-33 147.5 113 64.6
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 1.7e-33 147.1 98 67.3
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 1.7e-33 147.1 96 66.7
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 2.3e-33 146.7 77 87.0
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 6.6e-33 145.2 96 72.9
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 1.9e-32 143.7 104 62.5
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 3.3e-32 142.9 96 67.7
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 5.6e-32 142.1 104 67.3
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 7.3e-32 141.7 87 71.3
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 9.6e-32 141.4 76 84.2
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 3.6e-31 139.4 76 80.3
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 4.7e-31 139.0 87 69.0
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 4.0e-30 136.0 76 80.3
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 1.2e-29 134.4 76 80.3
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 1.2e-29 134.4 89 68.5
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 5.8e-29 132.1 89 67.4
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 7.6e-29 131.7 95 62.1
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 2.9e-28 129.8 100 65.0
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 1.6e-26 124.0 89 67.4
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 3.5e-26 122.9 78 70.5
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 7.8e-26 121.7 94 66.0
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 6.6e-25 118.6 105 52.4
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 4.3e-24 115.9 97 56.7
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 1.4e-22 110.9 114 47.4
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 1.5e-21 107.5 99 51.5
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 3.9e-17 92.8 55 76.4
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 6.7e-17 92.0 76 53.9
CBR_g29441 Chara braunii HOM05D007268 ORTHO05D009152 2.8e-15 86.7 110 41.8
PRCOL_00005812 Prasinoderma coloniale HOM05D007268 ORTHO05D009152 4.2e-11 72.8 92 43.5
Hund11618 Selenicereus undatus HOM05D023740 ORTHO05D382652 4.0e-06 56.2 53 49.1
MCO15G665 Micromonas commoda HOM05D007268 ORTHO05D009152 6.9e-06 55.5 63 42.9


User provided reference genes

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