Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund21503 Selenicereus undatus HOM05D005644 ORTHO05D007092 3.4e-109 398.3 193 100.0
EL10Ac4g07935 Beta vulgaris HOM05D005644 ORTHO05D007092 3.4e-101 371.7 193 91.7
Sc16g0002690 Simmondsia chinensis HOM05D005644 ORTHO05D007092 5.4e-99 364.4 193 89.6
TWI73G0320 Tripterygium wilfordii HOM05D005644 ORTHO05D007092 3.9e-97 358.2 193 87.0
AUR62020530 Chenopodium quinoa HOM05D005644 ORTHO05D007092 2.5e-96 355.5 193 90.2
AUR62043224 Chenopodium quinoa HOM05D005644 ORTHO05D007092 2.5e-96 355.5 193 90.2
Lj2A454T58 Lonicera japonica HOM05D005644 ORTHO05D007092 5.6e-96 354.4 193 87.0
Potri.005G121700 Populus trichocarpa HOM05D005644 ORTHO05D007092 7.4e-96 354.0 193 86.0
Ciclev10022394m.g Citrus clementina HOM05D005644 ORTHO05D007092 2.1e-95 352.4 193 86.0
Gohir.A02G166400 Gossypium hirsutum HOM05D005644 ORTHO05D007092 2.1e-95 352.4 193 86.5
Atru.chr7.2312 Acer truncatum HOM05D005644 ORTHO05D007092 2.8e-95 352.1 191 86.4
Dinv39995 Davidia involucrata HOM05D005644 ORTHO05D007092 2.8e-95 352.1 190 87.9
Gohir.D03G013600 Gossypium hirsutum HOM05D005644 ORTHO05D007092 3.7e-95 351.7 193 86.5
Gorai.003G013900 Gossypium raimondii HOM05D005644 ORTHO05D007092 3.7e-95 351.7 193 86.5
Eucgr.I02428 Eucalyptus grandis HOM05D005644 ORTHO05D007092 4.8e-95 351.3 193 85.5
Nn1g04949 Nelumbo nucifera HOM05D005644 ORTHO05D007092 6.2e-95 350.9 193 86.0
GSVIVG01018941001 Vitis vinifera HOM05D005644 ORTHO05D007092 6.2e-95 350.9 193 85.5
Oeu050374.1 Olea europaea HOM05D005644 ORTHO05D007092 1.1e-94 350.1 190 86.8
Sp3g31700 Schrenkiella parvula HOM05D005644 ORTHO05D007092 1.1e-94 350.1 193 85.5
Cc07_g09670 Coffea canephora HOM05D005644 ORTHO05D007092 1.4e-94 349.7 190 87.4
vmacro17823 Vaccinium macrocarpon HOM05D005644 ORTHO05D007092 2.4e-94 349.0 194 86.6
Carub.0003s3246 Capsella rubella HOM05D005644 ORTHO05D007092 3.1e-94 348.6 193 85.5
Aa31LG8G15730 Aethionema arabicum HOM05D005644 ORTHO05D007092 4.0e-94 348.2 193 85.5
Manes.02G095200 Manihot esculenta HOM05D005644 ORTHO05D007092 4.0e-94 348.2 193 85.0
A06p33310 Brassica napus HOM05D005644 ORTHO05D007092 5.3e-94 347.8 193 84.5
C03p59070 Brassica napus HOM05D005644 ORTHO05D007092 5.3e-94 347.8 193 84.5
BolC3t18168H Brassica oleracea HOM05D005644 ORTHO05D007092 5.3e-94 347.8 193 84.5
AL3G51550 Arabidopsis lyrata HOM05D005644 ORTHO05D007092 6.9e-94 347.4 193 85.0
AT2G18290 Arabidopsis thaliana HOM05D005644 ORTHO05D007092 6.9e-94 347.4 193 85.0
Duzib264G1010 Durio zibethinus HOM05D005644 ORTHO05D007092 6.9e-94 347.4 193 85.0
BcaB08g34803 Brassica carinata HOM05D005644 ORTHO05D007092 9.0e-94 347.1 193 83.9
Potri.007G023500 Populus trichocarpa HOM05D005644 ORTHO05D007092 1.2e-93 346.7 193 85.0
TAR101G0001 Trochodendron aralioides HOM05D005644 ORTHO05D007092 1.2e-93 346.7 193 83.9
Thecc.01G033400 Theobroma cacao HOM05D005644 ORTHO05D007092 1.5e-93 346.3 193 85.5
arahy.Tifrunner.gnm1.ann1.59MT2Q Arachis hypogaea HOM05D005644 ORTHO05D007092 2.0e-93 345.9 193 83.4
Prupe.7G156300 Prunus persica HOM05D005644 ORTHO05D007092 2.6e-93 345.5 193 85.5
Psat4g094240 Pisum sativum HOM05D005644 ORTHO05D007092 4.5e-93 344.7 193 83.9
Thhalv10022866m.g Eutrema salsugineum HOM05D005644 ORTHO05D007092 5.8e-93 344.4 193 84.5
QL06p046522 Quercus lobata HOM05D005644 ORTHO05D007092 5.8e-93 344.4 192 83.9
CiPaw.02G018800 Carya illinoinensis HOM05D005644 ORTHO05D007092 1.0e-92 343.6 193 83.4
Migut.L00368 Erythranthe guttata HOM05D005644 ORTHO05D007092 2.2e-92 342.4 190 84.2
Migut.L00376 Erythranthe guttata HOM05D005644 ORTHO05D007092 2.2e-92 342.4 190 84.2
Manes.01G136400 Manihot esculenta HOM05D005644 ORTHO05D007092 2.2e-92 342.4 193 85.0
SalBow5G1882 Salvia bowleyana HOM05D005644 ORTHO05D007092 2.2e-92 342.4 190 84.7
Lalb_Chr09g0333481 Lupinus albus HOM05D005644 ORTHO05D007092 2.9e-92 342.0 193 83.9
Ca_22319_v3 Cicer arietinum L. HOM05D005644 ORTHO05D007092 3.8e-92 341.7 193 82.9
MELO3C026580.2 Cucumis melo HOM05D005644 ORTHO05D007092 3.8e-92 341.7 193 82.4
MD02G1145400 Malus domestica HOM05D005644 ORTHO05D007092 3.8e-92 341.7 193 84.5
PGSC0003DMG400015483 Solanum tuberosum HOM05D005644 ORTHO05D007092 4.9e-92 341.3 190 84.7
HanXRQChr09g0261331 Helianthus annuus HOM05D005644 ORTHO05D007092 6.4e-92 340.9 193 82.4
THA.LOC104819776 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 8.4e-92 340.5 193 83.4
arahy.Tifrunner.gnm1.ann1.SR5TCU Arachis hypogaea HOM05D005644 ORTHO05D007092 1.1e-91 340.1 190 83.2
MSTRG.3592 Avicennia marina HOM05D005644 ORTHO05D007092 1.1e-91 340.1 190 83.7
Medtr8g077200 Medicago truncatula HOM05D005644 ORTHO05D007092 1.1e-91 340.1 193 82.9
Oeu002799.2 Olea europaea HOM05D005644 ORTHO05D007092 1.1e-91 340.1 190 84.7
Solyc02g062680.3 Solanum lycopersicum HOM05D005644 ORTHO05D007092 1.1e-91 340.1 190 84.7
Sopen02g013700 Solanum pennellii HOM05D005644 ORTHO05D007092 1.1e-91 340.1 190 84.7
CsaV3_3G042790 Cucumis sativus L. HOM05D005644 ORTHO05D007092 1.9e-91 339.3 193 81.9
SGA_v2.0_scaffold44G16541 Striga asiatica HOM05D005644 ORTHO05D007092 2.5e-91 339.0 190 84.7
Sed0008907 Sechium edule HOM05D005644 ORTHO05D007092 3.2e-91 338.6 193 81.9
PSO675G1163 Papaver somniferum HOM05D005644 ORTHO05D007092 4.2e-91 338.2 193 80.3
Phvul.003G254800 Phaseolus vulgaris HOM05D005644 ORTHO05D007092 5.5e-91 337.8 193 82.4
ECA232G0363 Erigeron canadensis HOM05D005644 ORTHO05D007092 7.1e-91 337.4 193 80.8
AUR62034193 Chenopodium quinoa HOM05D005644 ORTHO05D007092 1.2e-90 336.7 193 85.5
Glyma.16G138200 Glycine max HOM05D005644 ORTHO05D007092 1.2e-90 336.7 193 82.4
CAN.G53.17 Capsicum annuum HOM05D005644 ORTHO05D007092 3.5e-90 335.1 190 83.7
PSO541G0643 Papaver somniferum HOM05D005644 ORTHO05D007092 4.6e-90 334.7 193 79.8
RcHm_v2.0_Chr2g0101251 Rosa chinensis HOM05D005644 ORTHO05D007092 1.8e-89 332.8 193 82.4
THA.LOC104804235 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 3.0e-89 332.0 193 82.9
unitig_37.g12363 Utricularia gibba HOM05D005644 ORTHO05D007092 6.7e-89 330.9 190 81.1
CANSAT01G2444 Cannabis sativa HOM05D005644 ORTHO05D007092 1.1e-88 330.1 193 81.3
Lj4g0022669 Lotus japonicus HOM05D005644 ORTHO05D007092 1.1e-88 330.1 194 80.4
PGR031G1764 Punica granatum HOM05D005644 ORTHO05D007092 1.9e-88 329.3 197 80.7
Aqoxy6G01133 Aquilegia oxysepala HOM05D005644 ORTHO05D007092 4.3e-88 328.2 193 78.8
ClCG10G013900 Citrullus lanatus HOM05D005644 ORTHO05D007092 4.3e-88 328.2 219 72.6
ATR0594G186 Amborella trichopoda HOM05D005644 ORTHO05D007092 1.6e-87 326.2 193 80.3
Glyma.02G055400 Glycine max HOM05D005644 ORTHO05D007092 2.1e-87 325.9 193 81.3
FvH4_1g13080 Fragaria vesca HOM05D005644 ORTHO05D007092 3.7e-87 325.1 190 81.6
Lsat_1_v5_gn_4_151201 Lactuca sativa HOM05D005644 ORTHO05D007092 6.2e-87 324.3 182 84.6
MBI02_g12270_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 8.2e-87 323.9 210 75.7
Rhsim11G0151400 Rhododendron simsii HOM05D005644 ORTHO05D007092 8.2e-87 323.9 247 67.6
BraA06t26260Z Brassica rapa HOM05D005644 ORTHO05D007092 6.9e-86 320.9 199 78.4
PGR083G1765 Punica granatum HOM05D005644 ORTHO05D007092 2.6e-85 318.9 193 78.2
TPR.G24098 Trifolium pratense HOM05D005644 ORTHO05D007092 3.4e-85 318.5 232 68.5
Zm00001eb342630 Zea mays HOM05D005644 ORTHO05D007092 4.9e-84 314.7 177 82.5
FvH4_5g29620 Fragaria vesca HOM05D005644 ORTHO05D007092 6.5e-84 314.3 190 79.5
Os05g0579800 Oryza sativa ssp. japonica HOM05D005644 ORTHO05D007092 6.5e-84 314.3 192 78.1
CSS0024834 Camellia sinensis var. sinensis HOM05D005644 ORTHO05D007092 6.1e-82 307.8 164 89.0
Zm00001eb294590 Zea mays HOM05D005644 ORTHO05D007092 5.7e-80 301.2 177 79.1
Nitab4.5_0000136g0330 Nicotiana tabacum HOM05D005644 ORTHO05D007092 7.4e-80 300.8 172 83.7
Peaxi162Scf00008g03525 Petunia axillaris HOM05D005644 ORTHO05D007092 7.4e-80 300.8 190 77.9
CDE04G3399 Ceratophyllum demersum HOM05D005644 ORTHO05D007092 1.3e-79 300.1 164 82.9
VMungo0251G3244 Vigna mungo HOM05D005644 ORTHO05D007092 2.2e-79 299.3 170 84.1
Nitab4.5_0005482g0020 Nicotiana tabacum HOM05D005644 ORTHO05D007092 3.7e-79 298.5 174 83.9
Atru.chr3.600 Acer truncatum HOM05D005644 ORTHO05D007092 2.9e-76 288.9 194 72.2
Sabra05G0100200 Salix brachista HOM05D005644 ORTHO05D007092 6.5e-76 287.7 159 84.9
FAN19G1519 Fragaria x ananassa HOM05D005644 ORTHO05D007092 2.5e-75 285.8 167 82.6
BolC7t40857H Brassica oleracea HOM05D005644 ORTHO05D007092 1.0e-73 280.4 197 70.6
FAN28G2376 Fragaria x ananassa HOM05D005644 ORTHO05D003509 1.4e-67 260.0 157 81.5
FAN23G1669 Fragaria x ananassa HOM05D005644 ORTHO05D007092 1.9e-67 259.6 158 81.0
FAN08G2945 Fragaria x ananassa HOM05D005644 ORTHO05D007092 1.2e-66 256.9 156 79.5
Hma1.2p1_0789F.1_g218290 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 2.7e-66 255.8 134 90.3
MBI08_g40822_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 6.7e-65 251.1 227 59.5
Cpa.g.sc6.131 Carica papaya HOM05D005644 ORTHO05D007092 2.6e-64 249.2 147 81.0
HPP92_023420 Vanilla planifolia HOM05D005644 ORTHO05D007092 4.4e-64 248.4 193 65.3
BcaC06g36396 Brassica carinata HOM05D005644 ORTHO05D007092 1.1e-62 243.8 164 72.0
Mapoly0106s0034 Marchantia polymorpha HOM05D005644 ORTHO05D007092 5.9e-61 238.0 189 61.9
Pp3c7_6320 Physcomitrium patens HOM05D005644 ORTHO05D007092 2.7e-58 229.2 190 58.4
SMO137G0236 Selaginella moellendorffii HOM05D005644 ORTHO05D007092 5.2e-57 224.9 170 60.6
SGA_v2.0_scaffold2G01321 Striga asiatica HOM05D005644 ORTHO05D007092 3.3e-56 222.2 190 62.1
AagrBONN_evm.TU.Sc2ySwM_362.2207 Anthoceros agrestis HOM05D005644 ORTHO05D007092 2.2e-55 219.5 173 59.0
FAN26G0781 Fragaria x ananassa HOM05D000577 ORTHO05D003509 8.2e-55 217.6 133 78.9
CARHR108880 Cardamine hirsuta HOM05D005644 ORTHO05D007092 1.2e-53 213.8 112 87.5
MCO15G254 Micromonas commoda HOM05D005644 ORTHO05D007092 1.6e-53 213.4 178 56.2
PRCOL_00001837 Prasinoderma coloniale HOM05D005644 ORTHO05D007092 8.0e-50 201.1 166 58.4
FAN18G2110 Fragaria x ananassa HOM05D005644 ORTHO05D007092 1.8e-49 199.9 166 62.7
SEGI_22782 Sequoiadendron giganteum HOM05D005644 ORTHO05D007092 1.5e-43 180.3 110 74.5
Haze_27504 Corylus avellana HOM05D005644 ORTHO05D007092 1.4e-41 173.7 142 54.9
Cre13.g571850 Chlamydomonas reinhardtii HOM05D005644 ORTHO05D007092 4.9e-39 165.2 144 51.4
CBR_g49399 Chara braunii HOM05D005644 ORTHO05D007092 7.0e-38 161.4 112 63.4
DCAR_025950 Daucus carota HOM05D005644 ORTHO05D007092 9.2e-30 134.4 135 54.8
FAN13G0528 Fragaria x ananassa HOM05D005644 ORTHO05D007092 1.1e-27 127.5 167 44.3
MBI02_g42708_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.9e-27 126.7 135 53.3
Hma1.2p1_2451F.1_g322360 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 2.8e-26 122.9 132 50.8
C07p04570 Brassica napus HOM05D005644 ORTHO05D007092 4.0e-25 119.0 126 50.8
MBI18_g01974_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 7.0e-22 108.2 68 75.0
MBI02_g23461_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.7e-20 103.6 219 36.5
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 3.0e-20 102.8 123 48.0
MBI02_g17151_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.9e-19 100.1 135 44.4
Ah.13g077660 Amaranthus hybridus HOM05D005644 ORTHO05D007092 7.3e-19 98.2 57 78.9
Hund21501 Selenicereus undatus HOM05D005644 ORTHO05D007092 1.6e-18 97.1 53 92.5
Hma1.2p1_0450F.1_g155660 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 2.9e-15 86.3 57 66.7
COL.COLO4_22055 Corchorus olitorius HOM05D005644 ORTHO05D007092 6.0e-13 78.6 50 74.0
Thecc.08G151500 Theobroma cacao HOM05D005644 ORTHO05D007092 5.8e-08 62.0 33 78.8
MBI16_g04464_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 3.2e-06 56.2 102 34.3
Dinv38404 Davidia involucrata HOM05D005644 ORTHO05D007092 7.1e-06 55.1 37 62.2


User provided reference genes

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