Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund21482 Selenicereus undatus HOM05D001393 ORTHO05D007477 0.0e+00 1638.2 869 100.0
AUR62023073 Chenopodium quinoa HOM05D001393 ORTHO05D007477 1.0e-168 598.2 887 46.4
AUR62009391 Chenopodium quinoa HOM05D001393 ORTHO05D007477 2.3e-152 543.9 892 43.5
EL10Ac2g04339 Beta vulgaris HOM05D001393 ORTHO05D007477 8.0e-150 535.4 883 43.9
Sc11g0009120 Simmondsia chinensis HOM05D001393 ORTHO05D007477 2.4e-125 454.1 890 39.7
Ah.10g038800 Amaranthus hybridus HOM05D001393 ORTHO05D007477 1.8e-93 348.2 706 38.2
Atru.chr11.2612 Acer truncatum HOM05D001393 ORTHO05D007477 2.4e-93 347.8 889 34.9
CiPaw.14G000700 Carya illinoinensis HOM05D001393 ORTHO05D007477 1.5e-92 345.1 903 34.3
Actinidia21547 Actinidia chinensis HOM05D001393 ORTHO05D007477 1.7e-91 341.7 903 33.9
Cfa010777 Carpinus fangiana HOM05D001393 ORTHO05D007477 2.7e-89 334.3 916 34.0
FAN06G3336 Fragaria x ananassa HOM05D001393 ORTHO05D007477 7.9e-89 332.8 844 34.1
QL04p008271 Quercus lobata HOM05D001393 ORTHO05D007477 1.8e-88 331.6 910 33.0
Dinv09348 Davidia involucrata HOM05D001393 ORTHO05D007477 5.1e-88 330.1 979 33.0
FvH4_7g01170 Fragaria vesca HOM05D001393 ORTHO05D007477 5.7e-87 326.6 844 34.0
Thecc.01G409700 Theobroma cacao HOM05D001393 ORTHO05D007477 9.7e-87 325.9 895 33.5
Ciclev10030722m.g Citrus clementina HOM05D001393 ORTHO05D007477 1.1e-85 322.4 875 33.1
CANSAT80G1121 Cannabis sativa HOM05D001393 ORTHO05D007477 6.9e-85 319.7 906 30.9
Potri.001G265100 Populus trichocarpa HOM05D001393 ORTHO05D007477 1.5e-84 318.5 903 32.1
Prupe.2G015000 Prunus persica HOM05D001393 ORTHO05D007477 1.5e-84 318.5 857 34.2
FAN03G3510 Fragaria x ananassa HOM05D001393 ORTHO05D007477 2.6e-84 317.8 849 33.9
RcHm_v2.0_Chr1g0316471 Rosa chinensis HOM05D001393 ORTHO05D007477 3.4e-84 317.4 852 33.2
Manes.10G141000 Manihot esculenta HOM05D001393 ORTHO05D007477 3.2e-82 310.8 905 33.6
FAN01G2686 Fragaria x ananassa HOM05D001393 ORTHO05D007477 1.2e-81 308.9 882 32.1
GSVIVG01032121001 Vitis vinifera HOM05D001393 ORTHO05D007477 2.7e-81 307.8 859 32.4
FAN03G1765 Fragaria x ananassa HOM05D001393 ORTHO05D007477 4.6e-81 307.0 872 33.1
MD02G1309200 Malus domestica HOM05D001393 ORTHO05D007477 4.6e-81 307.0 867 34.9
COL.COLO4_04862 Corchorus olitorius HOM05D001393 ORTHO05D007477 3.9e-80 303.9 925 31.9
Sabra16G0162900 Salix brachista HOM05D001393 ORTHO05D007477 8.8e-80 302.8 837 33.5
vmacro13675 Vaccinium macrocarpon HOM05D001393 ORTHO05D007477 3.3e-79 300.8 901 31.2
Gohir.A08G143900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 5.3e-77 293.5 876 32.0
Duzib133G0545 Durio zibethinus HOM05D001393 ORTHO05D007477 9.1e-77 292.7 870 32.8
Cpa.g.sc125.11 Carica papaya HOM05D001393 ORTHO05D007477 1.0e-75 289.3 851 33.6
Solyc11g007060.2 Solanum lycopersicum HOM05D001393 ORTHO05D007477 3.8e-75 287.3 915 30.2
Sopen11g002980 Solanum pennellii HOM05D001393 ORTHO05D007477 4.2e-74 283.9 913 30.3
PGR044G2234 Punica granatum HOM05D001393 ORTHO05D007477 1.6e-73 282.0 799 34.0
CSS0038724 Camellia sinensis var. sinensis HOM05D001393 ORTHO05D007477 3.6e-73 280.8 680 34.9
Gohir.D08G164900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 7.9e-73 279.6 846 31.4
TWI73G0713 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 3.0e-72 277.7 652 33.7
Gorai.004G171900 Gossypium raimondii HOM05D001393 ORTHO05D007477 6.7e-72 276.6 852 31.1
Nn2g15307 Nelumbo nucifera HOM05D001393 ORTHO05D007477 8.8e-72 276.2 957 29.5
PGSC0003DMG401023992 Solanum tuberosum HOM05D001393 ORTHO05D007477 8.8e-72 276.2 918 29.1
Eucgr.J01280 Eucalyptus grandis HOM05D001393 ORTHO05D007477 1.5e-71 275.4 895 31.8
Sed0015725 Sechium edule HOM05D001393 ORTHO05D007477 3.3e-71 274.2 868 31.8
DCAR_029678 Daucus carota HOM05D001393 ORTHO05D007477 4.8e-70 270.4 586 36.9
TAR623G0231 Trochodendron aralioides HOM05D001393 ORTHO05D007477 4.5e-68 263.8 588 35.4
Potri.009G060000 Populus trichocarpa HOM05D001393 ORTHO05D007477 1.3e-67 262.3 667 34.0
CsaV3_7G030970 Cucumis sativus L. HOM05D001393 ORTHO05D007477 2.2e-67 261.5 878 31.0
ClCG09G004070 Citrullus lanatus HOM05D001393 ORTHO05D007477 5.0e-67 260.4 872 30.6
TWI09G0484 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 1.1e-66 259.2 611 34.0
MBI04_g36081_MAGBIO Magnolia biondii HOM05D001393 ORTHO05D007477 4.2e-66 257.3 614 33.4
Cc02_g28120 Coffea canephora HOM05D001393 ORTHO05D007477 4.7e-65 253.8 561 34.2
CAN.G1513.5 Capsicum annuum HOM05D001393 ORTHO05D007477 6.1e-65 253.4 918 29.1
MELO3C023559.2 Cucumis melo HOM05D001393 ORTHO05D007477 3.3e-63 247.7 923 29.8
Aqoxy1G00280 Aquilegia oxysepala HOM05D001393 ORTHO05D007477 3.7e-62 244.2 637 34.5
MD07G1012500 Malus domestica HOM05D001393 ORTHO05D007477 6.3e-62 243.4 529 37.2
Oeu049495.1 Olea europaea HOM05D001393 ORTHO05D007477 2.4e-61 241.5 592 34.5
Peaxi162Scf00152g01336 Petunia axillaris HOM05D001393 ORTHO05D007477 9.1e-61 239.6 972 28.8
MSTRG.28063 Avicennia marina HOM05D001393 ORTHO05D007477 2.0e-60 238.4 587 32.5
Ca_19581_v3 Cicer arietinum L. HOM05D001393 ORTHO05D007477 4.5e-60 237.3 877 30.4
Nitab4.5_0001761g0330 Nicotiana tabacum HOM05D001393 ORTHO05D007477 8.5e-59 233.0 886 30.0
Nitab4.5_0000001g0230 Nicotiana tabacum HOM05D001393 ORTHO05D007477 1.5e-58 232.3 802 29.9
SalBow7G4183 Salvia bowleyana HOM05D001393 ORTHO05D007477 1.5e-58 232.3 832 30.2
Migut.N01605 Erythranthe guttata HOM05D001393 ORTHO05D007477 4.2e-58 230.7 567 33.9
HanXRQChr09g0251311 Helianthus annuus HOM05D001393 ORTHO05D007477 9.4e-58 229.6 629 32.9
VMungo1127G2137 Vigna mungo HOM05D001393 ORTHO05D007477 9.4e-58 229.6 844 29.4
arahy.Tifrunner.gnm1.ann1.S6CP9J Arachis hypogaea HOM05D001393 ORTHO05D007477 1.6e-57 228.8 894 28.6
arahy.Tifrunner.gnm1.ann1.C4Q3NJ Arachis hypogaea HOM05D001393 ORTHO05D007477 3.6e-57 227.6 900 28.2
Lj3g0000057 Lotus japonicus HOM05D001393 ORTHO05D007477 1.4e-56 225.7 904 28.9
Medtr4g037495 Medicago truncatula HOM05D001393 ORTHO05D007477 1.8e-56 225.3 890 30.1
SGA_v2.0_scaffold5G02964 Striga asiatica HOM05D001393 ORTHO05D007477 1.2e-55 222.6 819 29.5
TPR.G3660 Trifolium pratense HOM05D001393 ORTHO05D007477 3.4e-55 221.1 594 33.5
PSO384G0142 Papaver somniferum HOM05D001393 ORTHO05D007477 5.7e-55 220.3 918 30.2
PSO339G5226 Papaver somniferum HOM05D001393 ORTHO05D007477 9.8e-55 219.5 919 30.6
Aa31LG11G7400 Aethionema arabicum HOM05D001393 ORTHO05D007477 6.3e-54 216.9 833 28.2
Glyma.09G228900 Glycine max HOM05D001393 ORTHO05D007477 8.3e-54 216.5 922 28.3
Phvul.011G009600 Phaseolus vulgaris HOM05D001393 ORTHO05D007477 1.6e-52 212.2 932 28.8
Thhalv10003674m.g Eutrema salsugineum HOM05D001393 ORTHO05D007477 2.0e-52 211.8 829 28.7
Glyma.12G007700 Glycine max HOM05D001393 ORTHO05D007477 2.0e-52 211.8 922 28.0
MSTRG.5028 Avicennia marina HOM05D001393 ORTHO05D007477 2.2e-51 208.4 862 28.7
Lsat_1_v5_gn_1_106561 Lactuca sativa HOM05D001393 ORTHO05D007477 6.5e-51 206.8 406 38.2
Psat7g196360 Pisum sativum HOM05D001393 ORTHO05D007477 8.5e-51 206.5 854 28.7
Dinv43433 Davidia involucrata HOM05D001393 ORTHO05D007477 1.9e-50 205.3 278 45.3
Sp2g18440 Schrenkiella parvula HOM05D001393 ORTHO05D007477 2.1e-49 201.8 567 31.2
BolC7t44402H Brassica oleracea HOM05D001393 ORTHO05D007477 1.0e-48 199.5 393 35.1
C07p38830 Brassica napus HOM05D001393 ORTHO05D007477 1.4e-48 199.1 393 35.1
A06p39440 Brassica napus HOM05D001393 ORTHO05D007477 2.3e-48 198.4 545 33.0
BraA06t26859Z Brassica rapa HOM05D001393 ORTHO05D007477 2.3e-48 198.4 545 33.0
CARHR184320 Cardamine hirsuta HOM05D001393 ORTHO05D007477 1.2e-47 196.1 392 35.7
Lalb_Chr19g0140311 Lupinus albus HOM05D001393 ORTHO05D007477 1.2e-47 196.1 907 27.3
Zm00001eb324710 Zea mays HOM05D001393 ORTHO05D007477 4.4e-47 194.1 628 30.4
SalBow6G6124 Salvia bowleyana HOM05D001393 ORTHO05D007477 7.5e-47 193.4 481 33.3
AT5G47940 Arabidopsis thaliana HOM05D001393 ORTHO05D007477 1.7e-46 192.2 535 32.1
Sabra09G0044200 Salix brachista HOM05D001393 ORTHO05D007477 3.7e-46 191.0 644 30.0
Zm00001eb107220 Zea mays HOM05D001393 ORTHO05D007477 4.9e-46 190.7 649 30.5
Duzib138G1437 Durio zibethinus HOM05D001393 ORTHO05D007477 1.2e-44 186.0 709 31.2
Os07g0569000 Oryza sativa ssp. japonica HOM05D001393 ORTHO05D007477 2.7e-44 184.9 626 31.5
AL8G20040 Arabidopsis lyrata HOM05D001393 ORTHO05D007477 7.7e-44 183.3 571 29.2
Carub.0008s0749 Capsella rubella HOM05D001393 ORTHO05D007477 5.0e-43 180.6 681 28.8
CDE05G0268 Ceratophyllum demersum HOM05D001393 ORTHO05D007477 1.8e-40 172.2 414 33.3
HPP92_015712 Vanilla planifolia HOM05D001393 ORTHO05D007477 7.5e-39 166.8 631 30.1
HPP92_026649 Vanilla planifolia HOM05D001393 ORTHO05D007477 3.2e-37 161.4 631 29.8
BcaC06g30834 Brassica carinata HOM05D001393 ORTHO05D007477 7.0e-37 160.2 541 29.6
unitig_578.g16692 Utricularia gibba HOM05D001393 ORTHO05D007477 9.2e-37 159.8 805 25.8
ATR0332G069 Amborella trichopoda HOM05D001393 ORTHO05D007477 1.6e-33 149.1 466 28.8
Lj9A633T62 Lonicera japonica HOM05D001393 ORTHO05D007477 3.6e-33 147.9 675 29.5
ECA248G1228 Erigeron canadensis HOM05D001393 ORTHO05D007477 1.1e-29 136.3 329 35.9
FAN10G3273 Fragaria x ananassa HOM05D001393 ORTHO05D007477 5.0e-27 127.5 163 43.6
Eucgr.J01288 Eucalyptus grandis HOM05D001393 ORTHO05D007477 1.4e-16 92.8 133 45.9
Dinv43435 Davidia involucrata HOM05D001393 ORTHO05D007477 6.0e-12 77.4 137 40.9
Ah.10g038790 Amaranthus hybridus HOM05D001393 ORTHO05D007477 1.2e-09 69.7 71 56.3
SEGI_29291 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 5.2e-08 64.3 789 21.9
Dinv43434 Davidia involucrata HOM05D001393 ORTHO05D007477 2.9e-06 58.5 74 44.6


User provided reference genes

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