Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund21369 Selenicereus undatus HOM05D016328 ORTHO05D019516 3.3e-216 755.0 445 100.0
AUR62012649 Chenopodium quinoa HOM05D016328 ORTHO05D019516 1.6e-106 390.6 450 46.7
AUR62022008 Chenopodium quinoa HOM05D016328 ORTHO05D019516 3.7e-82 309.7 323 52.0
AUR62012647 Chenopodium quinoa HOM05D016328 ORTHO05D019516 1.0e-79 301.6 331 49.8
AUR62022005 Chenopodium quinoa HOM05D016328 ORTHO05D019516 1.7e-50 204.5 159 62.9
Ah.09g235290 Amaranthus hybridus HOM05D016328 ORTHO05D019516 6.8e-44 182.6 262 40.1
AUR62022006 Chenopodium quinoa HOM05D016328 ORTHO05D019516 9.1e-41 172.2 273 37.0
Glyma.19G244300 Glycine max HOM05D000227 ORTHO05D000451 1.6e-08 65.1 129 30.2
Glyma.03G246800 Glycine max HOM05D000227 ORTHO05D000451 2.1e-08 64.7 129 29.5
SabraUnG0005800 Salix brachista HOM05D000227 ORTHO05D000451 2.1e-08 64.7 123 32.5
FvH4_7g20700 Fragaria vesca HOM05D000227 ORTHO05D000451 6.0e-08 63.2 139 28.8
RcHm_v2.0_Chr1g0364931 Rosa chinensis HOM05D000227 ORTHO05D000451 1.0e-07 62.4 129 30.2
HanXRQChr14g0432121 Helianthus annuus HOM05D000227 ORTHO05D000451 1.3e-07 62.0 109 33.9
FAN10G0417 Fragaria x ananassa HOM05D000227 ORTHO05D000139 1.7e-07 61.6 110 31.8
Medtr7g115040 Medicago truncatula HOM05D000227 ORTHO05D000451 2.3e-07 61.2 129 27.9
VMungo0540G0537 Vigna mungo HOM05D000227 ORTHO05D000451 8.6e-07 59.3 113 28.3
Medtr3g055570 Medicago truncatula HOM05D000227 ORTHO05D004136 7.3e-06 56.2 117 33.3
TPR.G7012 Trifolium pratense HOM05D000227 ORTHO05D000451 7.3e-06 56.2 129 27.9
FAN01G2463 Fragaria x ananassa HOM05D000227 ORTHO05D000451 9.6e-06 55.8 83 34.9
FAN01G2988 Fragaria x ananassa HOM05D000227 ORTHO05D000451 9.6e-06 55.8 83 34.9


User provided reference genes

Program Settings