Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 1.2e-152 543.1 263 100.0
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 1.4e-121 439.9 261 79.3
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 2.4e-121 439.1 261 78.5
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 7.6e-120 434.1 260 78.5
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 1.4e-118 429.9 261 78.5
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 5.5e-118 427.9 262 73.7
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 2.1e-117 426.0 262 74.8
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 4.6e-117 424.9 262 73.7
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 1.8e-116 422.9 262 73.3
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 3.0e-116 422.2 262 73.7
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 3.0e-116 422.2 262 74.0
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 3.0e-116 422.2 262 72.5
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 6.7e-116 421.0 262 75.6
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 6.7e-116 421.0 262 74.4
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 1.1e-115 420.2 262 75.2
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 1.5e-115 419.9 262 72.9
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 2.5e-115 419.1 262 73.3
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 3.3e-115 418.7 262 72.1
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 3.3e-115 418.7 262 72.9
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 3.3e-115 418.7 262 72.9
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 4.3e-115 418.3 262 72.9
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 5.7e-115 417.9 262 72.9
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 7.4e-115 417.5 276 70.7
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.3e-114 416.8 257 74.3
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 1.6e-114 416.4 262 72.9
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 4.8e-114 414.8 262 72.1
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 3.1e-113 412.1 259 72.2
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 5.3e-113 411.4 259 72.2
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 9.0e-113 410.6 259 72.2
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 9.0e-113 410.6 262 71.0
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 4.5e-112 408.3 262 72.1
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 5.9e-112 407.9 259 71.8
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 1.7e-111 406.4 262 70.6
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 5.0e-111 404.8 269 69.1
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 5.0e-111 404.8 251 74.1
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 6.5e-111 404.4 261 72.0
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 8.5e-111 404.1 262 69.1
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 1.1e-110 403.7 258 70.2
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 1.1e-110 403.7 259 71.4
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 1.9e-110 402.9 263 70.7
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 2.5e-110 402.5 257 71.2
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 2.5e-110 402.5 262 70.6
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 3.2e-110 402.1 259 71.4
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 3.2e-110 402.1 262 70.6
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 4.2e-110 401.7 263 71.1
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 4.2e-110 401.7 262 68.7
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 9.3e-110 400.6 259 69.5
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 9.3e-110 400.6 262 70.2
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 9.3e-110 400.6 263 70.7
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 1.2e-109 400.2 260 71.2
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 1.2e-109 400.2 260 71.2
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 1.2e-109 400.2 260 71.2
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 1.6e-109 399.8 258 72.5
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 2.1e-109 399.4 260 70.4
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 2.1e-109 399.4 261 70.1
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 2.1e-109 399.4 259 71.8
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 2.7e-109 399.1 260 70.0
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 4.6e-109 398.3 261 70.1
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 4.6e-109 398.3 263 70.3
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 4.6e-109 398.3 257 70.8
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 6.1e-109 397.9 259 69.9
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 6.1e-109 397.9 262 69.8
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 7.9e-109 397.5 261 69.3
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.0e-108 397.1 262 69.8
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 1.0e-108 397.1 262 69.8
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 1.3e-108 396.7 261 68.6
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 1.3e-108 396.7 261 69.0
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 1.3e-108 396.7 260 71.2
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 8.7e-108 394.0 262 67.9
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 8.7e-108 394.0 262 68.3
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 3.3e-107 392.1 260 70.0
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 3.3e-107 392.1 260 70.0
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 5.7e-107 391.3 262 68.7
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 9.7e-107 390.6 260 70.8
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 9.7e-107 390.6 262 68.3
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 1.3e-106 390.2 262 67.9
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 2.2e-106 389.4 263 68.8
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 2.2e-106 389.4 263 68.8
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 4.8e-106 388.3 262 67.2
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 1.4e-105 386.7 262 66.0
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 1.4e-105 386.7 262 66.0
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 3.1e-105 385.6 247 70.9
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 6.9e-105 384.4 262 67.9
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 1.5e-104 383.3 261 67.8
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 1.5e-104 383.3 261 67.4
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 1.3e-103 380.2 260 65.0
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 2.9e-103 379.0 262 67.2
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 8.5e-103 377.5 265 65.7
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 3.0e-100 369.0 263 65.0
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 3.9e-100 368.6 262 64.1
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 6.3e-98 361.3 254 67.7
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 1.8e-97 359.8 252 67.1
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 9.4e-94 347.4 224 72.8
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 2.3e-92 342.8 263 61.2
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 2.0e-91 339.7 263 61.2
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 2.6e-88 329.3 223 66.4
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 2.2e-87 326.2 230 65.7
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 6.5e-79 298.1 249 56.2
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 2.3e-76 289.7 174 74.7
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 2.6e-75 286.2 188 69.1
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 5.5e-70 268.5 245 51.0
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 2.1e-69 266.5 251 49.0
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 3.8e-63 245.7 245 47.8
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 2.3e-60 236.5 242 45.9
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 8.3e-50 201.4 152 61.8
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 6.4e-42 175.3 109 72.5
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 7.1e-41 171.8 242 39.7
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 1.7e-39 167.2 109 69.7
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 3.6e-37 159.5 280 40.7
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 3.1e-36 156.4 147 54.4
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 1.0e-31 141.4 83 75.9
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 4.3e-30 136.0 100 60.0
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.6e-29 134.0 101 59.4
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 6.2e-21 105.5 67 70.1
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 1.4e-20 104.4 66 69.7
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 9.0e-20 101.7 65 66.2
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 6.7e-15 85.5 41 92.7
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 6.7e-15 85.5 52 69.2
Nn1g06940 Nelumbo nucifera HOM05D006759 ORTHO05D008633 3.3e-06 56.6 48 60.4


User provided reference genes

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