Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund21211 Selenicereus undatus HOM05D005633 ORTHO05D007003 0.0e+00 1676.8 834 100.0
EL10Ac8g20419 Beta vulgaris HOM05D005633 ORTHO05D007003 2.7e-259 899.0 793 60.2
AUR62014850 Chenopodium quinoa HOM05D005633 ORTHO05D007003 2.3e-239 832.8 793 56.0
Ah.14g089640 Amaranthus hybridus HOM05D005633 ORTHO05D007003 6.8e-239 831.2 781 58.5
AUR62017045 Chenopodium quinoa HOM05D005633 ORTHO05D007003 6.0e-227 791.6 792 54.5
Sc05g0007520 Simmondsia chinensis HOM05D005633 ORTHO05D007003 4.1e-220 768.8 800 52.6
QL05p041669 Quercus lobata HOM05D005633 ORTHO05D007003 2.4e-204 716.5 804 49.8
Potri.004G046900 Populus trichocarpa HOM05D005633 ORTHO05D007003 1.1e-201 707.6 811 50.6
Sabra04G0029300 Salix brachista HOM05D005633 ORTHO05D007003 4.8e-200 702.2 808 50.4
Atru.chr10.1839_Atru.chr10.1840 Acer truncatum HOM05D005633 ORTHO05D007003 2.0e-198 696.8 804 50.6
Potri.011G056100 Populus trichocarpa HOM05D005633 ORTHO05D007003 3.8e-197 692.6 812 49.6
TAR629G0889 Trochodendron aralioides HOM05D005633 ORTHO05D007003 5.4e-196 688.7 800 49.8
Nn1g04161 Nelumbo nucifera HOM05D005633 ORTHO05D007003 1.0e-194 684.5 824 48.5
Rhsim02G0132600 Rhododendron simsii HOM05D005633 ORTHO05D007003 5.1e-194 682.2 807 47.6
GSVIVG01021090001 Vitis vinifera HOM05D005633 ORTHO05D007003 5.6e-193 678.7 804 48.3
Cc02_g13630 Coffea canephora HOM05D005633 ORTHO05D007003 7.4e-193 678.3 801 47.6
Manes.17G047800 Manihot esculenta HOM05D005633 ORTHO05D007003 7.4e-193 678.3 811 48.5
Gohir.A06G129500 Gossypium hirsutum HOM05D005633 ORTHO05D007003 2.1e-192 676.8 805 48.4
Atru.chr10.1822_Atru.chr10.1823 Acer truncatum HOM05D005633 ORTHO05D007003 3.7e-192 676.0 779 50.8
FvH4_3g08860 Fragaria vesca HOM05D005633 ORTHO05D007003 8.1e-192 674.9 804 48.9
Gorai.010G155400 Gossypium raimondii HOM05D005633 ORTHO05D007003 8.1e-192 674.9 802 48.6
FAN21G3099 Fragaria x ananassa HOM05D005633 ORTHO05D007003 1.4e-191 674.1 804 48.6
CiPaw.09G062100 Carya illinoinensis HOM05D005633 ORTHO05D007003 2.4e-191 673.3 802 48.3
FAN11G1234 Fragaria x ananassa HOM05D005633 ORTHO05D007003 2.4e-191 673.3 804 48.9
Gohir.D06G133500 Gossypium hirsutum HOM05D005633 ORTHO05D007003 1.5e-190 670.6 801 48.4
Thecc.06G183700 Theobroma cacao HOM05D005633 ORTHO05D007003 2.0e-190 670.2 817 48.1
Hma1.2p1_0208F.1_g088350 Hydrangea macrophylla HOM05D005633 ORTHO05D007003 7.6e-190 668.3 801 49.1
MD10G1291600 Malus domestica HOM05D005633 ORTHO05D007003 1.0e-189 667.9 807 47.3
Oeu029366.1 Olea europaea HOM05D005633 ORTHO05D007003 2.2e-189 666.8 802 47.3
Cfa000508 Carpinus fangiana HOM05D005633 ORTHO05D007003 2.9e-189 666.4 806 48.0
Duzib235G0140 Durio zibethinus HOM05D005633 ORTHO05D007003 3.2e-188 662.9 810 48.5
FAN25G1993 Fragaria x ananassa HOM05D005633 ORTHO05D007003 3.2e-188 662.9 804 48.5
Sabra11G0038100 Salix brachista HOM05D005633 ORTHO05D007003 2.1e-187 660.2 842 47.0
COL.COLO4_31438 Corchorus olitorius HOM05D005633 ORTHO05D007003 3.3e-185 652.9 830 45.9
Solyc02g077900.4 Solanum lycopersicum HOM05D005633 ORTHO05D007003 7.4e-185 651.7 814 46.1
Migut.M01122 Erythranthe guttata HOM05D005633 ORTHO05D007003 9.6e-185 651.4 785 46.5
TWI63G0225 Tripterygium wilfordii HOM05D005633 ORTHO05D007003 8.2e-184 648.3 809 45.7
Sopen02g022750 Solanum pennellii HOM05D005633 ORTHO05D007003 2.4e-183 646.7 812 45.7
CANSAT35G1988 Cannabis sativa HOM05D005633 ORTHO05D007003 4.1e-183 646.0 793 47.8
Lj2C290G9 Lonicera japonica HOM05D005633 ORTHO05D007003 1.0e-181 641.3 815 44.9
TPR.G16498 Trifolium pratense HOM05D005633 ORTHO05D007003 2.2e-181 640.2 806 46.2
Glyma.13G237200 Glycine max HOM05D005633 ORTHO05D007003 9.3e-180 634.8 799 46.9
Medtr2g014210 Medicago truncatula HOM05D005633 ORTHO05D007003 1.2e-179 634.4 817 46.0
arahy.Tifrunner.gnm1.ann1.QNV263 Arachis hypogaea HOM05D005633 ORTHO05D007003 1.6e-179 634.0 805 46.3
DCAR_004057 Daucus carota HOM05D005633 ORTHO05D007003 1.6e-179 634.0 795 45.9
Nitab4.5_0016285g0010 Nicotiana tabacum HOM05D005633 ORTHO05D007003 1.6e-179 634.0 816 45.6
CAN.G529.25 Capsicum annuum HOM05D005633 ORTHO05D007003 4.6e-179 632.5 819 45.1
Lj6g0019345 Lotus japonicus HOM05D005633 ORTHO05D007003 1.8e-178 630.6 805 45.7
PGSC0003DMG400029731 Solanum tuberosum HOM05D005633 ORTHO05D007003 2.3e-178 630.2 830 45.3
PSO675G0497 Papaver somniferum HOM05D005633 ORTHO05D007003 3.3e-177 626.3 805 47.7
Ca_00349_v3 Cicer arietinum L. HOM05D005633 ORTHO05D007003 6.3e-176 622.1 798 46.4
Aqoxy1G02351 Aquilegia oxysepala HOM05D005633 ORTHO05D007003 1.1e-175 621.3 784 46.3
Phvul.006G183800 Phaseolus vulgaris HOM05D005633 ORTHO05D007003 6.9e-175 618.6 789 46.3
Dinv17333 Davidia involucrata HOM05D005633 ORTHO05D007003 1.2e-174 617.8 797 45.8
ECA248G0126 Erigeron canadensis HOM05D005633 ORTHO05D007003 4.5e-174 615.9 779 46.1
Lalb_Chr18g0059461 Lupinus albus HOM05D005633 ORTHO05D007003 2.2e-173 613.6 807 45.2
Sed0020009 Sechium edule HOM05D005633 ORTHO05D007003 5.0e-173 612.5 793 45.1
arahy.Tifrunner.gnm1.ann1.U0Q0B6 Arachis hypogaea HOM05D005633 ORTHO05D007003 2.5e-172 610.1 807 45.6
SalBow8G0351 Salvia bowleyana HOM05D005633 ORTHO05D007003 3.2e-172 609.8 828 43.1
Psat1g203720 Pisum sativum HOM05D005633 ORTHO05D007003 9.4e-172 608.2 796 44.3
Ciclev10014582m.g Citrus clementina HOM05D005633 ORTHO05D007003 5.1e-170 602.4 643 51.0
ATR0752G234 Amborella trichopoda HOM05D005633 ORTHO05D007003 8.8e-170 601.7 800 45.1
CsaV3_6G050250 Cucumis sativus L. HOM05D005633 ORTHO05D007003 2.5e-169 600.1 819 43.8
FAN16G2481 Fragaria x ananassa HOM05D005633 ORTHO05D007003 3.3e-169 599.7 803 45.7
Lsat_1_v5_gn_1_124421 Lactuca sativa HOM05D005633 ORTHO05D007003 4.8e-168 595.9 777 44.4
CARHR027810 Cardamine hirsuta HOM05D005633 ORTHO05D007003 8.2e-168 595.1 806 45.9
ClCG01G023110 Citrullus lanatus HOM05D005633 ORTHO05D007003 9.1e-167 591.7 812 44.3
AL1G41900 Arabidopsis lyrata HOM05D005633 ORTHO05D007003 2.6e-166 590.1 807 44.6
THA.LOC104820553 Tarenaya hassleriana HOM05D005633 ORTHO05D007003 5.9e-166 589.0 804 44.7
Actinidia26133 Actinidia chinensis HOM05D005633 ORTHO05D007003 1.0e-165 588.2 639 50.9
Thhalv10006942m.g Eutrema salsugineum HOM05D005633 ORTHO05D007003 1.3e-165 587.8 792 43.7
HanXRQChr01g0004651 Helianthus annuus HOM05D005633 ORTHO05D007003 1.1e-164 584.7 775 44.5
AT1G28320 Arabidopsis thaliana HOM05D005633 ORTHO05D007003 1.4e-164 584.3 808 44.9
Sp1g24540 Schrenkiella parvula HOM05D005633 ORTHO05D007003 3.2e-164 583.2 815 44.4
Carub.0001s2677 Capsella rubella HOM05D005633 ORTHO05D007003 1.0e-162 578.2 793 44.9
A09p37740 Brassica napus HOM05D005633 ORTHO05D007003 1.5e-161 574.3 802 45.0
Peaxi162Scf01100g00118 Petunia axillaris HOM05D005633 ORTHO05D007003 4.4e-161 572.8 813 42.4
BraA09t39286Z Brassica rapa HOM05D005633 ORTHO05D007003 9.7e-161 571.6 804 44.9
C05p27200 Brassica napus HOM05D005633 ORTHO05D007003 2.8e-160 570.1 805 44.5
BolC5t31434H Brassica oleracea HOM05D005633 ORTHO05D007003 8.2e-160 568.5 802 43.9
PGR042G0490 Punica granatum HOM05D005633 ORTHO05D007003 5.3e-159 565.8 785 43.8
SEGI_06204 Sequoiadendron giganteum HOM05D005633 ORTHO05D007003 2.5e-156 557.0 846 41.6
SGA_v2.0_scaffold100G29699 Striga asiatica HOM05D005633 ORTHO05D007003 3.6e-155 553.1 804 41.7
Aa31sc86G40 Aethionema arabicum HOM05D005633 ORTHO05D007003 5.7e-153 545.8 803 43.5
Nitab4.5_0002219g0050 Nicotiana tabacum HOM05D005633 ORTHO05D007003 1.2e-150 538.1 821 41.4
vmacro15920 Vaccinium macrocarpon HOM05D005633 ORTHO05D007003 1.3e-149 534.6 576 50.0
VMungo0540G1564 Vigna mungo HOM05D005633 ORTHO05D007003 2.9e-149 533.5 790 42.2
Actinidia07591 Actinidia chinensis HOM05D005633 ORTHO05D007003 6.5e-149 532.3 810 41.6
MELO3C007272.2 Cucumis melo HOM05D005633 ORTHO05D007003 2.5e-140 503.8 721 42.7
Prupe.4G050600 Prunus persica HOM05D005633 ORTHO05D007003 1.4e-138 498.0 576 49.0
Haze_06405 Corylus avellana HOM05D005633 ORTHO05D007003 4.9e-136 489.6 579 48.5
Eucgr.E03258 Eucalyptus grandis HOM05D005633 ORTHO05D007003 2.0e-134 484.2 567 47.4
Zm00001eb291760 Zea mays HOM05D005633 ORTHO05D007003 4.0e-130 469.9 794 37.8
Pp3c24_9210 Physcomitrium patens HOM05D005633 ORTHO05D007003 2.6e-129 467.2 836 38.5
Mapoly0045s0140 Marchantia polymorpha HOM05D005633 ORTHO05D007003 1.0e-125 455.3 876 36.2
Os05g0497700 Oryza sativa ssp. japonica HOM05D005633 ORTHO05D007003 8.6e-125 452.2 739 39.6
Cpa.g.sc373.8 Carica papaya HOM05D005633 ORTHO05D007003 2.2e-120 437.6 532 45.1
AagrBONN_evm.TU.Sc2ySwM_228.2766 Anthoceros agrestis HOM05D005633 ORTHO05D007003 8.9e-114 415.6 859 34.5
Hma1.2p1_0208F.1_g088340 Hydrangea macrophylla HOM05D005633 ORTHO05D007003 1.9e-108 397.9 499 47.1
Glyma.15G076300 Glycine max HOM05D005633 ORTHO05D007003 3.7e-104 383.6 794 35.9
Thhalv10007180m.g Eutrema salsugineum HOM05D005633 ORTHO05D007003 6.0e-102 376.3 800 34.1
unitig_27.g24969 Utricularia gibba HOM05D005633 ORTHO05D007003 3.1e-98 364.0 710 34.8
RcHm_v2.0_Chr5g0008891 Rosa chinensis HOM05D005633 ORTHO05D007003 7.8e-94 349.4 425 47.1
RcHm_v2.0_Chr5g0008901 Rosa chinensis HOM05D005633 ORTHO05D007003 5.4e-87 326.6 330 55.5
BcaB07g32447 Brassica carinata HOM05D005633 ORTHO05D007003 5.6e-84 316.6 404 46.8
MBI02_g35620_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 6.2e-83 313.2 462 44.8
BcaB07g32448 Brassica carinata HOM05D005633 ORTHO05D007003 9.6e-68 262.7 324 46.0
HPP92_025315 Vanilla planifolia HOM05D005633 ORTHO05D007003 9.6e-68 262.7 438 39.0
CDE11G0431 Ceratophyllum demersum HOM05D005645 ORTHO05D007156 6.9e-66 256.5 388 40.5
CBR_g49783 Chara braunii HOM05D005633 ORTHO05D001702 4.5e-49 200.7 633 28.1
HPP92_025316 Vanilla planifolia HOM05D005633 ORTHO05D007003 4.7e-46 190.7 268 42.5
Haze_06406 Corylus avellana HOM05D005633 ORTHO05D007003 2.0e-44 185.3 228 47.4
Cpa.g.sc373.5 Carica papaya HOM05D005633 ORTHO05D007003 9.7e-44 183.0 189 54.5
MBI02_g35622_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 4.7e-38 164.1 273 41.4
CDE11G0408 Ceratophyllum demersum HOM05D005633 ORTHO05D007003 1.2e-36 159.5 257 39.3
vmacro15921 Vaccinium macrocarpon HOM05D005633 ORTHO05D007003 2.6e-28 131.7 145 51.0
MBI02_g35619_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 5.7e-28 130.6 267 34.1
Actinidia39471 Actinidia chinensis HOM05D005633 ORTHO05D007003 2.2e-24 118.6 117 53.8
MBI02_g19360_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 1.4e-21 109.4 213 34.3
MapolyY_B0048 Marchantia polymorpha HOM05D005633 ORTHO05D007003 8.8e-21 106.7 120 45.8
MCO12G111 Micromonas commoda HOM05D005633 ORTHO05D007003 3.8e-16 91.3 562 24.0
MBI02_g35618_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 2.8e-14 85.1 83 51.8
MD05G1312100 Malus domestica HOM05D005633 ORTHO05D007003 1.4e-13 82.8 107 43.9
MBI02_g19359_MAGBIO Magnolia biondii HOM05D005633 ORTHO05D007003 1.3e-11 76.3 102 39.2
CBR_g49781 Chara braunii HOM05D005633 ORTHO05D007003 1.0e-08 66.6 176 29.5
Cre12.g548200 Chlamydomonas reinhardtii HOM05D005633 ORTHO05D007003 3.0e-08 65.1 192 25.5
BolC3t19753H Brassica oleracea HOM05D005633 ORTHO05D007003 1.5e-07 62.8 44 59.1
CDE05G1605 Ceratophyllum demersum HOM05D005633 ORTHO05D007003 1.9e-07 62.4 130 32.3
A08p25680 Brassica napus HOM05D005633 ORTHO05D007003 5.6e-07 60.8 44 56.8


User provided reference genes

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