Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund21193 Selenicereus undatus HOM05D007006 ORTHO05D008925 2.5e-167 592.0 299 100.0
COL.COLO4_31384 Corchorus olitorius HOM05D007006 ORTHO05D008976 4.1e-61 239.2 182 68.1
Eucgr.E02654 Eucalyptus grandis HOM05D007006 ORTHO05D008925 1.6e-60 237.3 160 76.2
Eucgr.E03165 Eucalyptus grandis HOM05D007006 ORTHO05D008925 1.6e-60 237.3 162 75.9
Manes.16G034601 Manihot esculenta HOM05D007006 ORTHO05D008925 3.5e-60 236.1 134 84.3
ClCG03G007950 Citrullus lanatus HOM05D007006 ORTHO05D008925 5.0e-59 232.3 201 61.7
Gohir.A10G029300 Gossypium hirsutum HOM05D007006 ORTHO05D008925 1.9e-58 230.3 140 79.3
Gohir.D10G029800 Gossypium hirsutum HOM05D007006 ORTHO05D008925 1.9e-58 230.3 140 79.3
Gorai.011G031700 Gossypium raimondii HOM05D007006 ORTHO05D008925 1.9e-58 230.3 140 79.3
Sc05g0007280 Simmondsia chinensis HOM05D007006 ORTHO05D008925 1.9e-58 230.3 185 68.6
TPR.G31857 Trifolium pratense HOM05D007006 ORTHO05D008925 1.9e-58 230.3 147 78.9
CiPaw.10G055000 Carya illinoinensis HOM05D007006 ORTHO05D008925 3.2e-58 229.6 168 71.4
Atru.chr10.1745 Acer truncatum HOM05D007006 ORTHO05D008925 4.2e-58 229.2 139 79.9
Ciclev10016962m.g Citrus clementina HOM05D007006 ORTHO05D008925 5.5e-58 228.8 125 87.2
Duzib160G0118 Durio zibethinus HOM05D007006 ORTHO05D008925 5.5e-58 228.8 168 69.0
GSVIVG01021151001 Vitis vinifera HOM05D007006 ORTHO05D008925 9.4e-58 228.0 134 82.1
THA.LOC104798412 Tarenaya hassleriana HOM05D007006 ORTHO05D008925 1.2e-57 227.6 184 64.1
arahy.Tifrunner.gnm1.ann1.PE4VQR Arachis hypogaea HOM05D000109 ORTHO05D000965 1.6e-57 227.3 147 77.6
Thecc.06G177200 Theobroma cacao HOM05D007006 ORTHO05D008925 2.1e-57 226.9 142 78.9
VMungo0540G0068 Vigna mungo HOM05D007006 ORTHO05D008925 2.1e-57 226.9 137 82.5
TAR626G0127 Trochodendron aralioides HOM05D007006 ORTHO05D008925 3.6e-57 226.1 134 82.1
MD10G1285600 Malus domestica HOM05D007006 ORTHO05D008925 1.0e-56 224.6 137 79.6
Sed0005765 Sechium edule HOM05D007006 ORTHO05D008925 1.0e-56 224.6 138 78.3
Nn1g04307 Nelumbo nucifera HOM05D007006 ORTHO05D008925 3.0e-56 223.0 134 78.4
Haze_06320 Corylus avellana HOM05D007006 ORTHO05D008925 4.0e-56 222.6 157 71.3
MELO3C002631.2 Cucumis melo HOM05D007006 ORTHO05D008925 4.0e-56 222.6 155 72.9
Phvul.006G179400 Phaseolus vulgaris HOM05D007006 ORTHO05D008925 4.0e-56 222.6 160 73.1
Cc02_g14310 Coffea canephora HOM05D007006 ORTHO05D008925 5.2e-56 222.2 141 77.3
PSO210G2152 Papaver somniferum HOM05D007006 ORTHO05D008925 5.2e-56 222.2 169 67.5
Lj6g0023400 Lotus japonicus HOM05D007006 ORTHO05D008925 6.8e-56 221.9 132 84.1
CsaV3_1G012640 Cucumis sativus L. HOM05D007006 ORTHO05D008925 8.8e-56 221.5 163 73.0
Potri.011G062200 Populus trichocarpa HOM05D007006 ORTHO05D008925 1.2e-55 221.1 140 76.4
CARHR225300 Cardamine hirsuta HOM05D007006 ORTHO05D008925 2.0e-55 220.3 176 64.8
Glyma.13G233500 Glycine max HOM05D007006 ORTHO05D008925 2.0e-55 220.3 135 82.2
Glyma.15G079600 Glycine max HOM05D007006 ORTHO05D008925 2.0e-55 220.3 147 78.9
PGSC0003DMG400010717 Solanum tuberosum HOM05D007006 ORTHO05D008925 2.6e-55 219.9 152 72.4
CANSAT35G1771 Cannabis sativa HOM05D007006 ORTHO05D008925 4.4e-55 219.2 158 71.5
Nitab4.5_0000376g0100 Nicotiana tabacum HOM05D007006 ORTHO05D008925 4.4e-55 219.2 152 71.7
BraA01t00989Z Brassica rapa HOM05D007006 ORTHO05D008925 5.7e-55 218.8 180 63.9
FAN11G3635 Fragaria x ananassa HOM05D007006 ORTHO05D008925 5.7e-55 218.8 145 75.2
FAN16G3644 Fragaria x ananassa HOM05D007006 ORTHO05D008925 5.7e-55 218.8 145 75.2
Actinidia07621 Actinidia chinensis HOM05D007006 ORTHO05D008925 7.5e-55 218.4 134 78.4
CSS0027125 Camellia sinensis var. sinensis HOM05D007006 ORTHO05D008925 7.5e-55 218.4 134 79.1
Nitab4.5_0011727g0040 Nicotiana tabacum HOM05D007006 ORTHO05D008925 7.5e-55 218.4 135 77.8
Psat1g148320 Pisum sativum HOM05D007006 ORTHO05D008925 7.5e-55 218.4 152 75.7
Prupe.4G056000 Prunus persica HOM05D007006 ORTHO05D008925 7.5e-55 218.4 159 69.2
Sabra11G0042600 Salix brachista HOM05D007006 ORTHO05D008925 7.5e-55 218.4 153 71.9
Sabra11G0044100 Salix brachista HOM05D007006 ORTHO05D008925 7.5e-55 218.4 153 71.9
BcaC09g51505 Brassica carinata HOM05D007006 ORTHO05D008925 9.8e-55 218.0 153 68.6
BolC1t01215H Brassica oleracea HOM05D007006 ORTHO05D008925 9.8e-55 218.0 153 68.6
Carub.0007s2277 Capsella rubella HOM05D007006 ORTHO05D008925 9.8e-55 218.0 173 66.5
Thhalv10026439m.g Eutrema salsugineum HOM05D007006 ORTHO05D008925 9.8e-55 218.0 134 76.9
Cpa.g.sc7.31 Carica papaya HOM05D007006 ORTHO05D008925 1.3e-54 217.6 140 75.0
Sopen02g022230 Solanum pennellii HOM05D007006 ORTHO05D008925 1.7e-54 217.2 129 80.6
AL7G35820 Arabidopsis lyrata HOM05D007006 ORTHO05D008925 2.2e-54 216.9 129 78.3
Dinv17375 Davidia involucrata HOM05D007006 ORTHO05D008925 2.2e-54 216.9 137 80.3
Solyc02g077310.4 Solanum lycopersicum HOM05D007006 ORTHO05D008925 2.2e-54 216.9 129 80.6
AT4G18460 Arabidopsis thaliana HOM05D007006 ORTHO05D008925 4.8e-54 215.7 129 78.3
Sp7g15560 Schrenkiella parvula HOM05D007006 ORTHO05D008925 6.3e-54 215.3 177 63.3
CAN.G79.66 Capsicum annuum HOM05D007006 ORTHO05D008925 8.3e-54 214.9 152 71.1
FvH4_3g08260 Fragaria vesca HOM05D007006 ORTHO05D008925 8.3e-54 214.9 141 75.9
Rhsim02G0152900 Rhododendron simsii HOM05D007006 ORTHO05D008925 8.3e-54 214.9 157 71.3
Os01g0242500 Oryza sativa ssp. japonica HOM05D007006 ORTHO05D008925 1.4e-53 214.2 134 78.4
Ca_11669_v3 Cicer arietinum L. HOM05D007006 ORTHO05D008925 4.1e-53 212.6 129 82.2
Aa31LG6G1200 Aethionema arabicum HOM05D007006 ORTHO05D008925 5.4e-53 212.2 172 64.5
TWI63G0680 Tripterygium wilfordii HOM05D007006 ORTHO05D008925 5.4e-53 212.2 149 72.5
CDE02G4743 Ceratophyllum demersum HOM05D007006 ORTHO05D008925 9.1e-53 211.5 148 71.6
Oeu001091.1 Olea europaea HOM05D007006 ORTHO05D008925 9.1e-53 211.5 151 68.2
Zm00001eb122370 Zea mays HOM05D007006 ORTHO05D008925 1.6e-52 210.7 134 76.9
Hma1.2p1_0155F.1_g068540 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 2.0e-52 210.3 136 75.7
RcHm_v2.0_Chr5g0009821 Rosa chinensis HOM05D007006 ORTHO05D008925 2.7e-52 209.9 145 73.1
ATR0602G073 Amborella trichopoda HOM05D007006 ORTHO05D008925 3.5e-52 209.5 134 77.6
SalBow8G1160 Salvia bowleyana HOM05D007006 ORTHO05D008925 4.5e-52 209.1 147 69.4
SEGI_08558 Sequoiadendron giganteum HOM05D007006 ORTHO05D008925 5.9e-52 208.8 129 79.8
BcaNung05874 Brassica carinata HOM05D007006 ORTHO05D008925 1.0e-51 208.0 180 61.1
Migut.M01077 Erythranthe guttata HOM05D007006 ORTHO05D008925 1.3e-51 207.6 151 68.9
FAN21G1832 Fragaria x ananassa HOM05D007006 ORTHO05D008925 2.3e-51 206.8 134 76.9
HPP92_002943 Vanilla planifolia HOM05D007006 ORTHO05D008925 2.3e-51 206.8 134 75.4
MSTRG.7381 Avicennia marina HOM05D007006 ORTHO05D008925 8.6e-51 204.9 151 66.9
A01p10430 Brassica napus HOM05D007006 ORTHO05D008925 8.6e-51 204.9 172 62.8
C01p12410 Brassica napus HOM05D007006 ORTHO05D008925 5.5e-50 202.2 165 63.6
Medtr2g036040 Medicago truncatula HOM05D007006 ORTHO05D008925 5.5e-50 202.2 139 74.8
ECA248G3223 Erigeron canadensis HOM05D007006 ORTHO05D008925 2.1e-49 200.3 134 73.9
HanXRQChr01g0008471 Helianthus annuus HOM05D007006 ORTHO05D008925 3.6e-49 199.5 157 65.0
CBR_g12914 Chara braunii HOM05D007006 ORTHO05D008925 3.7e-46 189.5 135 68.1
SGA_v2.0_scaffold309G48148 Striga asiatica HOM05D007006 ORTHO05D008925 8.3e-46 188.3 158 62.0
Mapoly0096s0066 Marchantia polymorpha HOM05D007006 ORTHO05D008925 2.4e-45 186.8 129 69.0
SGA_v2.0_scaffold309G48130 Striga asiatica HOM05D007006 ORTHO05D008925 2.4e-45 186.8 283 43.1
SMO356G0615 Selaginella moellendorffii HOM05D007006 ORTHO05D008925 2.0e-44 183.7 129 69.8
Pp3c2_4790 Physcomitrium patens HOM05D007006 ORTHO05D008925 3.5e-44 183.0 115 73.9
Lj1A1197T80 Lonicera japonica HOM05D007006 ORTHO05D008925 5.9e-44 182.2 136 71.3
CBR_g28086 Chara braunii HOM05D007006 ORTHO05D008925 1.7e-43 180.6 129 66.7
Lsat_1_v5_gn_1_120360 Lactuca sativa HOM05D007006 ORTHO05D008925 2.3e-43 180.3 135 65.9
RcHm_v2.0_Chr5g0007981 Rosa chinensis HOM05D007006 ORTHO05D008925 7.5e-39 165.2 127 68.5
Hma1.2p1_0155F.1_g068550 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 1.1e-37 161.4 139 64.0
EL10Ac8g20473 Beta vulgaris HOM05D007006 ORTHO05D008925 1.9e-34 150.6 178 53.9
AUR62031124 Chenopodium quinoa HOM05D007006 ORTHO05D008925 2.1e-33 147.1 157 56.1
Peaxi162Scf00875g00318 Petunia axillaris HOM05D007006 ORTHO05D008925 3.6e-33 146.4 89 74.2
Cfa000555 Carpinus fangiana HOM05D007006 ORTHO05D008925 4.7e-33 146.0 160 56.2
Lalb_Chr20g0121401 Lupinus albus HOM05D007006 ORTHO05D008925 7.5e-31 138.7 81 74.1
AUR62014917 Chenopodium quinoa HOM05D007006 ORTHO05D008925 1.9e-29 134.0 134 59.0
Cre12.g542000 Chlamydomonas reinhardtii HOM05D007006 ORTHO05D008925 5.4e-29 132.5 130 51.5
MCO06G160 Micromonas commoda HOM05D007006 ORTHO05D008925 5.1e-27 125.9 122 53.3
DCAR_004029 Daucus carota HOM05D007006 ORTHO05D008925 4.7e-25 119.4 97 59.8
Haze_27122 Corylus avellana HOM05D007006 ORTHO05D008925 5.2e-24 115.9 124 45.2
PRCOL_00003508 Prasinoderma coloniale HOM05D007006 ORTHO05D008925 8.3e-22 108.6 130 45.4
PSO832G1055 Papaver somniferum HOM05D007006 ORTHO05D008925 1.1e-21 108.2 166 42.2
MBI06_g25712_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 4.1e-21 106.3 67 76.1
PGR042G2307 Punica granatum HOM05D007006 ORTHO05D008925 1.2e-20 104.8 62 80.6
CBR_g41520 Chara braunii HOM05D000019 ORTHO05D000002 8.6e-19 98.6 64 67.2
Actinidia39491 Actinidia chinensis HOM05D007006 ORTHO05D008925 2.8e-17 93.6 79 64.6
SGA_v2.0_scaffold309G48132 Striga asiatica HOM05D007006 ORTHO05D008925 1.2e-15 88.2 129 43.4
MBI06_g25714_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 1.4e-08 64.7 42 71.4


User provided reference genes

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