Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund21049 Selenicereus undatus HOM05D001099 ORTHO05D382539 1.7e-137 492.7 247 100.0
Hund21048 Selenicereus undatus HOM05D001099 ORTHO05D381733 1.0e-41 174.5 167 62.3
EL10Ac4g09627 Beta vulgaris HOM05D001099 ORTHO05D000958 7.9e-26 121.7 182 45.1
EL10Ac4g09626 Beta vulgaris HOM05D001099 ORTHO05D000958 3.0e-25 119.8 182 44.5
AUR62000519 Chenopodium quinoa HOM05D001099 ORTHO05D000958 1.5e-24 117.5 176 44.3
EL10Ac4g09628 Beta vulgaris HOM05D001099 ORTHO05D000958 3.3e-24 116.3 178 44.9
AUR62026932 Chenopodium quinoa HOM05D001099 ORTHO05D000958 7.4e-24 115.2 181 43.1
AUR62041577 Chenopodium quinoa HOM05D001099 ORTHO05D000958 7.4e-24 115.2 181 43.1
AUR62006864 Chenopodium quinoa HOM05D001099 ORTHO05D000958 9.6e-24 114.8 176 44.3
AUR62006862 Chenopodium quinoa HOM05D001099 ORTHO05D000958 8.1e-23 111.7 176 42.0
AUR62041576 Chenopodium quinoa HOM05D001099 ORTHO05D000958 3.1e-22 109.8 180 38.9
EL10Ac7g16670 Beta vulgaris HOM05D001099 ORTHO05D000958 4.0e-22 109.4 181 41.4
AUR62006866 Chenopodium quinoa HOM05D001099 ORTHO05D000958 2.0e-21 107.1 178 41.6
Ah.06g191050 Amaranthus hybridus HOM05D001099 ORTHO05D038227 4.5e-21 105.9 179 41.3
AUR62000522 Chenopodium quinoa HOM05D001099 ORTHO05D000958 7.6e-21 105.1 192 40.1
Ah.06g191060 Amaranthus hybridus HOM05D001099 ORTHO05D000958 1.7e-20 104.0 181 42.0
Ah.08g211490 Amaranthus hybridus HOM05D001099 ORTHO05D000958 2.1e-18 97.1 181 38.7
Hund21051 Selenicereus undatus HOM05D001099 ORTHO05D000958 2.1e-18 97.1 178 39.9
AUR62006861 Chenopodium quinoa HOM05D001099 ORTHO05D000958 3.5e-18 96.3 185 38.4
AUR62026933 Chenopodium quinoa HOM05D001099 ORTHO05D000958 1.3e-17 94.4 178 36.5
AUR62006867 Chenopodium quinoa HOM05D001099 ORTHO05D000958 6.7e-17 92.0 191 37.7
EL10Ac4g09629 Beta vulgaris HOM05D001099 ORTHO05D000958 4.3e-16 89.4 194 37.1
EL10Ac4g09625 Beta vulgaris HOM05D001099 ORTHO05D000958 4.8e-15 85.9 178 39.3
AUR62000518 Chenopodium quinoa HOM05D001099 ORTHO05D038227 4.1e-14 82.8 99 45.5
AUR62006016 Chenopodium quinoa HOM05D001099 ORTHO05D000958 4.1e-14 82.8 201 33.3
Hund21047 Selenicereus undatus HOM05D001099 ORTHO05D000958 5.3e-14 82.4 220 31.4
AUR62006865 Chenopodium quinoa HOM05D001099 ORTHO05D000958 5.9e-13 79.0 175 36.6
Medtr3g092460 Medicago truncatula HOM05D001099 ORTHO05D000958 5.9e-13 79.0 91 41.8
Eucgr.K00423 Eucalyptus grandis HOM05D001099 ORTHO05D000958 2.2e-12 77.0 90 43.3
Eucgr.L02980 Eucalyptus grandis HOM05D001099 ORTHO05D000958 2.2e-12 77.0 90 43.3
AUR62000520 Chenopodium quinoa HOM05D001099 ORTHO05D000958 2.9e-12 76.6 178 37.6
Sc13g0010200 Simmondsia chinensis HOM05D001099 ORTHO05D000958 2.9e-12 76.6 90 42.2
FAN03G0031 Fragaria x ananassa HOM05D001099 ORTHO05D000958 6.5e-12 75.5 92 41.3
FAN03G1450 Fragaria x ananassa HOM05D001099 ORTHO05D000958 6.5e-12 75.5 92 41.3
FAN10G3023 Fragaria x ananassa HOM05D001099 ORTHO05D000958 6.5e-12 75.5 92 41.3
FAN10G3756 Fragaria x ananassa HOM05D001099 ORTHO05D000958 6.5e-12 75.5 92 41.3
Oeu023682.1 Olea europaea HOM05D001099 ORTHO05D000958 1.1e-11 74.7 90 40.0
Psat5g073120 Pisum sativum HOM05D001099 ORTHO05D000958 1.1e-11 74.7 90 40.0
Psat5g073280 Pisum sativum HOM05D001099 ORTHO05D000958 1.1e-11 74.7 90 40.0
AUR62000521 Chenopodium quinoa HOM05D001099 ORTHO05D000958 1.4e-11 74.3 177 35.0
Duzib205G1413 Durio zibethinus HOM05D001099 ORTHO05D000958 1.9e-11 73.9 90 40.0
FvH4_7g32800 Fragaria vesca HOM05D001099 ORTHO05D000958 1.9e-11 73.9 92 40.2
FAN01G1585 Fragaria x ananassa HOM05D001099 ORTHO05D000958 1.9e-11 73.9 92 40.2
Atru.chr12.2398 Acer truncatum HOM05D001099 ORTHO05D000958 2.5e-11 73.6 93 39.8
PGR142G4429 Punica granatum HOM05D001099 ORTHO05D000958 2.5e-11 73.6 98 39.8
THA.LOC104811889 Tarenaya hassleriana HOM05D001099 ORTHO05D000958 3.2e-11 73.2 90 40.0
TPR.G28973 Trifolium pratense HOM05D001099 ORTHO05D000958 3.2e-11 73.2 91 38.5
Dinv29220 Davidia involucrata HOM05D001099 ORTHO05D000958 4.2e-11 72.8 93 38.7
AT4G27670 Arabidopsis thaliana HOM05D001099 ORTHO05D000958 5.5e-11 72.4 92 41.3
BcaNung01641 Brassica carinata HOM05D001099 ORTHO05D000958 5.5e-11 72.4 90 40.0
Lalb_Chr08g0239771 Lupinus albus HOM05D001099 ORTHO05D000958 5.5e-11 72.4 90 37.8
RcHm_v2.0_Chr1g0382761 Rosa chinensis HOM05D001099 ORTHO05D000958 5.5e-11 72.4 90 41.1
CANSAT21G0926 Cannabis sativa HOM05D001099 ORTHO05D000958 7.2e-11 72.0 88 36.4
Carub.0007s1315 Capsella rubella HOM05D001099 ORTHO05D000958 7.2e-11 72.0 92 41.3
A01p19110 Brassica napus HOM05D001099 ORTHO05D000958 9.3e-11 71.6 89 38.2
C01p24030 Brassica napus HOM05D001099 ORTHO05D000958 9.3e-11 71.6 89 38.2
BolC1t02359H Brassica oleracea HOM05D001099 ORTHO05D000958 9.3e-11 71.6 89 38.2
BraA01t01853Z Brassica rapa HOM05D001099 ORTHO05D000958 9.3e-11 71.6 89 38.2
Phvul.009G046500 Phaseolus vulgaris HOM05D001099 ORTHO05D000958 9.3e-11 71.6 93 38.7
MSTRG.26985 Avicennia marina HOM05D001099 ORTHO05D000958 1.2e-10 71.2 89 40.4
Ca_16765_v3 Cicer arietinum L. HOM05D001099 ORTHO05D000958 1.2e-10 71.2 91 38.5
Glyma.04G229800 Glycine max HOM05D001099 ORTHO05D000958 1.2e-10 71.2 93 37.6
Gohir.A08G104100 Gossypium hirsutum HOM05D001099 ORTHO05D000958 1.2e-10 71.2 91 38.5
MBI12_g16190_MAGBIO Magnolia biondii HOM05D001099 ORTHO05D000958 1.2e-10 71.2 94 37.2
Potri.012G022400 Populus trichocarpa HOM05D001099 ORTHO05D000958 1.2e-10 71.2 90 37.8
vmacro06431 Vaccinium macrocarpon HOM05D001099 ORTHO05D000958 1.2e-10 71.2 175 29.7
arahy.Tifrunner.gnm1.ann1.6K80GF Arachis hypogaea HOM05D001099 ORTHO05D000958 1.6e-10 70.9 90 38.9
EL10Ac3g05195 Beta vulgaris HOM05D001099 ORTHO05D000958 1.6e-10 70.9 229 30.1
Rhsim03G0214500 Rhododendron simsii HOM05D001099 ORTHO05D000958 1.6e-10 70.9 99 36.4
Actinidia34260 Actinidia chinensis HOM05D001099 ORTHO05D000958 2.1e-10 70.5 226 30.1
BcaC09g50550 Brassica carinata HOM05D001099 ORTHO05D000958 2.1e-10 70.5 89 38.2
Glyma.06G134900 Glycine max HOM05D001099 ORTHO05D000958 2.1e-10 70.5 93 37.6
Prupe.2G317700 Prunus persica HOM05D001099 ORTHO05D000958 2.1e-10 70.5 90 37.8
MSTRG.8615 Avicennia marina HOM05D001099 ORTHO05D000958 2.7e-10 70.1 90 40.0
MD07G1298000 Malus domestica HOM05D001099 ORTHO05D000958 2.7e-10 70.1 90 38.9
AUR62035610 Chenopodium quinoa HOM05D001099 ORTHO05D000958 3.5e-10 69.7 92 37.0
DCAR_008975 Daucus carota HOM05D001099 ORTHO05D000958 3.5e-10 69.7 238 27.7
Lj1g0004957 Lotus japonicus HOM05D001099 ORTHO05D000958 3.5e-10 69.7 93 38.7
Sp7g25650 Schrenkiella parvula HOM05D001099 ORTHO05D000958 3.5e-10 69.7 92 39.1
Thecc.03G207300 Theobroma cacao HOM05D001099 ORTHO05D000958 3.5e-10 69.7 90 36.7
arahy.Tifrunner.gnm1.ann1.QR3Y2J Arachis hypogaea HOM05D001099 ORTHO05D000958 4.6e-10 69.3 90 37.8
Gohir.D08G115600 Gossypium hirsutum HOM05D001099 ORTHO05D000958 4.6e-10 69.3 91 37.4
Ciclev10022024m.g Citrus clementina HOM05D001099 ORTHO05D000958 6.1e-10 68.9 93 37.6
COL.COLO4_14358 Corchorus olitorius HOM05D001099 ORTHO05D000958 6.1e-10 68.9 90 37.8
Lj1A1027T36 Lonicera japonica HOM05D001099 ORTHO05D000958 6.1e-10 68.9 99 37.4
Peaxi162Scf00300g00829 Petunia axillaris HOM05D001099 ORTHO05D000958 6.1e-10 68.9 91 39.6
Hund09705 Selenicereus undatus HOM05D001099 ORTHO05D000958 6.1e-10 68.9 223 29.6
TWI39G0534 Tripterygium wilfordii HOM05D001099 ORTHO05D000958 6.1e-10 68.9 90 37.8
Gorai.004G124600 Gossypium raimondii HOM05D001099 ORTHO05D000958 7.9e-10 68.6 91 37.4
Hma1.2p1_0094F.1_g047280 Hydrangea macrophylla HOM05D001099 ORTHO05D000958 7.9e-10 68.6 110 35.5
VMungo1309G2540 Vigna mungo HOM05D001099 ORTHO05D000958 7.9e-10 68.6 93 36.6
Ah.07g204810 Amaranthus hybridus HOM05D001099 ORTHO05D000958 1.0e-09 68.2 92 35.9
Duzib068G0845 Durio zibethinus HOM05D001099 ORTHO05D000958 1.0e-09 68.2 89 40.4
MD01G1227600 Malus domestica HOM05D001099 ORTHO05D000958 1.0e-09 68.2 90 37.8
Cpa.g.sc3.147 Carica papaya HOM05D001099 ORTHO05D000958 1.3e-09 67.8 93 35.5
CiPaw.05G203400 Carya illinoinensis HOM05D001099 ORTHO05D000958 1.8e-09 67.4 96 35.4
Aa31LG1G13820 Aethionema arabicum HOM05D000495 ORTHO05D000357 2.3e-09 67.0 133 32.3
Aqoxy5G04287 Aquilegia oxysepala HOM05D001099 ORTHO05D000958 2.3e-09 67.0 91 36.3
AL7G24990 Arabidopsis lyrata HOM05D001099 ORTHO05D000958 2.3e-09 67.0 102 33.3
Thhalv10026184m.g Eutrema salsugineum HOM05D001099 ORTHO05D000958 2.3e-09 67.0 89 36.0
CSS0020189 Camellia sinensis var. sinensis HOM05D001099 ORTHO05D000958 3.0e-09 66.6 90 35.6
CSS0036209 Camellia sinensis var. sinensis HOM05D001099 ORTHO05D000958 3.0e-09 66.6 90 35.6
Cc02_g00910 Coffea canephora HOM05D001099 ORTHO05D000958 3.0e-09 66.6 95 32.6
Lsat_1_v5_gn_8_4541 Lactuca sativa HOM05D001099 ORTHO05D000958 3.0e-09 66.6 96 35.4
Manes.01G042200 Manihot esculenta HOM05D001099 ORTHO05D000958 3.0e-09 66.6 90 34.4
Nitab4.5_0006389g0020 Nicotiana tabacum HOM05D001099 ORTHO05D000958 3.0e-09 66.6 91 36.3
Sabra05G0140300 Salix brachista HOM05D001099 ORTHO05D000958 3.0e-09 66.6 92 35.9
CARHR235400 Cardamine hirsuta HOM05D001099 ORTHO05D000958 3.9e-09 66.2 90 35.6
GSVIVG01038631001 Vitis vinifera HOM05D001099 ORTHO05D000958 3.9e-09 66.2 90 36.7
Gohir.D12G247450 Gossypium hirsutum HOM05D001099 ORTHO05D000958 5.1e-09 65.9 89 36.0
Gorai.008G265500 Gossypium raimondii HOM05D001099 ORTHO05D000958 5.1e-09 65.9 89 36.0
SEGI_20528 Sequoiadendron giganteum HOM05D001099 ORTHO05D000958 5.1e-09 65.9 94 36.2
Solyc03g082420.3 Solanum lycopersicum HOM05D001099 ORTHO05D000958 5.1e-09 65.9 92 35.9
Sopen03g022140 Solanum pennellii HOM05D001099 ORTHO05D000958 5.1e-09 65.9 92 35.9
CDE05G0669 Ceratophyllum demersum HOM05D001099 ORTHO05D000958 6.7e-09 65.5 104 34.6
Sabra12G0011400 Salix brachista HOM05D001099 ORTHO05D000958 6.7e-09 65.5 91 35.2
SalBow6G6877 Salvia bowleyana HOM05D001099 ORTHO05D000958 6.7e-09 65.5 87 39.1
Nitab4.5_0000319g0220 Nicotiana tabacum HOM05D001099 ORTHO05D000958 1.5e-08 64.3 232 28.0
HPP92_022253 Vanilla planifolia HOM05D001099 ORTHO05D000958 1.5e-08 64.3 96 33.3
QL09p007324 Quercus lobata HOM05D001099 ORTHO05D000958 1.9e-08 63.9 89 37.1
PGSC0003DMG400003219 Solanum tuberosum HOM05D001099 ORTHO05D000958 2.5e-08 63.5 92 34.8
CAN.G303.8 Capsicum annuum HOM05D001099 ORTHO05D000958 3.3e-08 63.2 92 35.9
Eucgr.A01416 Eucalyptus grandis HOM05D001099 ORTHO05D000958 3.3e-08 63.2 94 34.0
ECA233G5101 Erigeron canadensis HOM05D001099 ORTHO05D000958 4.3e-08 62.8 96 33.3
Os03g0245800 Oryza sativa ssp. japonica HOM05D001099 ORTHO05D000958 4.3e-08 62.8 98 34.7
SEGI_24420 Sequoiadendron giganteum HOM05D001099 ORTHO05D000958 4.3e-08 62.8 144 31.2
ATR0824G132 Amborella trichopoda HOM05D001099 ORTHO05D000958 7.4e-08 62.0 142 30.3
Solyc05g014280.4 Solanum lycopersicum HOM05D001099 ORTHO05D000958 1.3e-07 61.2 92 38.0
EL10Ac8g19121 Beta vulgaris HOM05D001099 ORTHO05D089226 2.2e-07 60.5 99 37.4
FvH4_6g02120 Fragaria vesca HOM05D001099 ORTHO05D000958 2.2e-07 60.5 88 35.2
FAN05G3142 Fragaria x ananassa HOM05D001099 ORTHO05D000958 3.7e-07 59.7 133 30.8
SMO364G0379 Selaginella moellendorffii HOM05D000136 ORTHO05D000958 3.7e-07 59.7 94 34.0
Zm00001eb010530 Zea mays HOM05D001099 ORTHO05D000958 3.7e-07 59.7 98 33.7
HPP92_007342 Vanilla planifolia HOM05D001099 ORTHO05D000958 6.3e-07 58.9 93 32.3
Sc03g0006990 Simmondsia chinensis HOM05D001099 ORTHO05D000958 8.2e-07 58.5 119 30.3
Sopen05g009370 Solanum pennellii HOM05D001099 ORTHO05D000958 8.2e-07 58.5 92 37.0
FvH4_4g24850 Fragaria vesca HOM05D001099 ORTHO05D000958 1.1e-06 58.2 161 27.3
FAN12G2577 Fragaria x ananassa HOM05D001099 ORTHO05D000958 1.1e-06 58.2 161 27.3
HanXRQChr08g0225741 Helianthus annuus HOM05D001099 ORTHO05D000958 1.4e-06 57.8 109 29.4
Sc03g0006910 Simmondsia chinensis HOM05D001099 ORTHO05D000958 1.4e-06 57.8 119 30.3
SGA_v2.0_scaffold44G16843 Striga asiatica HOM05D001099 ORTHO05D000958 1.4e-06 57.8 90 32.2
Thecc.02G082300 Theobroma cacao HOM05D001099 ORTHO05D000958 1.4e-06 57.8 92 35.9
Actinidia28278 Actinidia chinensis HOM05D001099 ORTHO05D000958 1.8e-06 57.4 101 33.7
COL.COLO4_23563 Corchorus olitorius HOM05D000960 ORTHO05D000958 1.8e-06 57.4 169 26.6
Pp3c7_25570 Physcomitrium patens HOM05D001099 ORTHO05D000958 1.8e-06 57.4 90 31.1
Sed0022054 Sechium edule HOM05D001099 ORTHO05D000958 2.4e-06 57.0 95 32.6
TPR.G33393 Trifolium pratense HOM05D001099 ORTHO05D000958 2.4e-06 57.0 103 33.0
unitig_747.g21736 Utricularia gibba HOM05D000136 ORTHO05D000080 2.4e-06 57.0 81 35.8
FAN22G1154 Fragaria x ananassa HOM05D001099 ORTHO05D000958 3.1e-06 56.6 161 26.7
HanXRQChr12g0372131 Helianthus annuus HOM05D001099 ORTHO05D000958 3.1e-06 56.6 93 35.5
PGSC0003DMG400011977 Solanum tuberosum HOM05D001099 ORTHO05D000958 3.1e-06 56.6 93 35.5
SGA_v2.0_scaffold87G27117 Striga asiatica HOM05D001099 ORTHO05D000958 3.1e-06 56.6 92 38.0
CDE07G1226 Ceratophyllum demersum HOM05D001099 ORTHO05D000958 4.1e-06 56.2 95 36.8
Medtr3g086050 Medicago truncatula HOM05D001099 ORTHO05D000958 4.1e-06 56.2 90 36.7
Peaxi162Scf00797g00012 Petunia axillaris HOM05D001099 ORTHO05D000958 4.1e-06 56.2 98 33.7
Duzib268G1734 Durio zibethinus HOM05D001099 ORTHO05D000958 5.3e-06 55.8 141 28.4
Nitab4.5_0001318g0050 Nicotiana tabacum HOM05D001099 ORTHO05D000958 5.3e-06 55.8 89 33.7
Cc11_g16360 Coffea canephora HOM05D001099 ORTHO05D000958 6.9e-06 55.5 159 28.9
Glyma.18G010500 Glycine max HOM05D001099 ORTHO05D000958 6.9e-06 55.5 103 33.0
Potri.015G005801 Populus trichocarpa HOM05D001099 ORTHO05D000958 6.9e-06 55.5 101 33.7
Prupe.1G237800 Prunus persica HOM05D001099 ORTHO05D000958 6.9e-06 55.5 163 27.0
ATR0078G019 Amborella trichopoda HOM05D001099 ORTHO05D000958 9.0e-06 55.1 89 33.7
Lsat_1_v5_gn_8_151001 Lactuca sativa HOM05D001099 ORTHO05D000958 9.0e-06 55.1 100 34.0


User provided reference genes

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