Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund21017 Selenicereus undatus HOM05D002759 ORTHO05D003290 5.1e-81 304.3 146 100.0
AUR62035559 Chenopodium quinoa HOM05D002759 ORTHO05D003290 6.5e-28 127.9 140 50.7
EL10Ac3g05252 Beta vulgaris HOM05D002759 ORTHO05D003290 1.2e-26 123.6 142 46.5
AUR62006068 Chenopodium quinoa HOM05D002759 ORTHO05D003290 2.3e-25 119.4 125 48.8
Ah.07g205390 Amaranthus hybridus HOM05D002759 ORTHO05D003290 2.4e-22 109.4 140 42.9
Hund11642 Selenicereus undatus HOM05D002759 ORTHO05D003290 6.5e-20 101.3 154 40.9
Hund17372 Selenicereus undatus HOM05D002759 ORTHO05D003290 2.2e-15 86.3 116 41.4
GSVIVG01023021001 Vitis vinifera HOM05D002759 ORTHO05D003290 2.6e-13 79.3 111 42.3
Potri.003G021700 Populus trichocarpa HOM05D002759 ORTHO05D003290 4.5e-13 78.6 114 38.6
Manes.07G013200 Manihot esculenta HOM05D002759 ORTHO05D003290 1.0e-12 77.4 112 36.6
Dinv24260 Davidia involucrata HOM05D002759 ORTHO05D003290 2.9e-12 75.9 116 36.2
CSS0015736 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 5.0e-12 75.1 101 41.6
Cpa.g.sc148.29 Carica papaya HOM05D002759 ORTHO05D003290 5.0e-12 75.1 90 37.8
Eucgr.G00634 Eucalyptus grandis HOM05D002759 ORTHO05D003290 6.5e-12 74.7 92 40.2
Sabra03G0013600 Salix brachista HOM05D002759 ORTHO05D003290 6.5e-12 74.7 114 37.7
TAR381G0620 Trochodendron aralioides HOM05D002759 ORTHO05D003290 1.9e-11 73.2 109 42.2
Lsat_1_v5_gn_5_109460 Lactuca sativa HOM05D002759 ORTHO05D003290 9.4e-11 70.9 89 40.4
Actinidia39057 Actinidia chinensis HOM05D002759 ORTHO05D003290 1.6e-10 70.1 134 34.3
Rhsim11G0131800 Rhododendron simsii HOM05D002759 ORTHO05D003290 3.6e-10 68.9 91 40.7
MD15G1418900 Malus domestica HOM05D002759 ORTHO05D003290 6.1e-10 68.2 91 37.4
DCAR_005626 Daucus carota HOM05D002759 ORTHO05D003290 1.8e-09 66.6 110 32.7
RcHm_v2.0_Chr7g0222331 Rosa chinensis HOM05D002759 ORTHO05D003290 3.0e-09 65.9 91 37.4
MELO3C011463.2 Cucumis melo HOM05D002759 ORTHO05D003290 6.7e-09 64.7 92 38.0
CiPaw.05G042600 Carya illinoinensis HOM05D002759 ORTHO05D003290 1.2e-08 63.9 110 34.5
Lj9C311G18 Lonicera japonica HOM05D002759 ORTHO05D003290 2.0e-08 63.2 91 33.0
Sed0002146 Sechium edule HOM05D002759 ORTHO05D003290 2.0e-08 63.2 91 38.5
ClCG08G010020 Citrullus lanatus HOM05D002759 ORTHO05D003290 3.3e-08 62.4 92 37.0
Atru.chr6.1078 Acer truncatum HOM05D002759 ORTHO05D003290 4.4e-08 62.0 90 41.1
COL.COLO4_08439 Corchorus olitorius HOM05D002759 ORTHO05D003290 4.4e-08 62.0 116 32.8
Gohir.A01G176550 Gossypium hirsutum HOM05D002759 ORTHO05D003290 4.4e-08 62.0 104 31.7
Gohir.D01G167366 Gossypium hirsutum HOM05D002759 ORTHO05D003290 7.5e-08 61.2 104 32.7
Nn5g28049 Nelumbo nucifera HOM05D002759 ORTHO05D003290 7.5e-08 61.2 89 37.1
CsaV3_6G032190 Cucumis sativus L. HOM05D002759 ORTHO05D003290 1.7e-07 60.1 92 35.9
Solyc01g104490.3 Solanum lycopersicum HOM05D002759 ORTHO05D003290 2.2e-07 59.7 87 36.8
Atru.chr6.1027 Acer truncatum HOM05D002759 ORTHO05D003290 2.8e-07 59.3 90 40.0
THA.LOC104814230 Tarenaya hassleriana HOM05D002759 ORTHO05D003290 3.7e-07 58.9 89 33.7
Sopen01g046990 Solanum pennellii HOM05D002759 ORTHO05D003290 6.3e-07 58.2 87 35.6
Psat1g219920 Pisum sativum HOM05D002759 ORTHO05D003290 1.1e-06 57.4 101 30.7
Ca_00091_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 1.4e-06 57.0 88 35.2
Ca_29930_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 1.4e-06 57.0 88 35.2
Glyma.08G184200 Glycine max HOM05D002759 ORTHO05D003290 2.4e-06 56.2 110 32.7
Aqoxy3G00692 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 7.0e-06 54.7 88 36.4
CANSAT11G0811 Cannabis sativa HOM05D002759 ORTHO05D003290 7.0e-06 54.7 88 33.0
HanXRQChr10g0290421 Helianthus annuus HOM05D002759 ORTHO05D003290 9.1e-06 54.3 89 31.5


User provided reference genes

Program Settings