Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund21010 Selenicereus undatus HOM05D001074 ORTHO05D001188 6.3e-103 377.5 197 100.0
Hund11651 Selenicereus undatus HOM05D001074 ORTHO05D001188 4.6e-53 211.8 180 70.6
AUR62006080 Chenopodium quinoa HOM05D001074 ORTHO05D001188 4.3e-51 205.3 204 60.3
Sc13g0009950 Simmondsia chinensis HOM05D001074 ORTHO05D001188 2.1e-50 203.0 180 65.6
AUR62019414 Chenopodium quinoa HOM05D001074 ORTHO05D001188 1.5e-48 196.8 214 57.0
Ah.07g205520 Amaranthus hybridus HOM05D001074 ORTHO05D001188 1.1e-46 190.7 201 58.7
EL10Ac3g05268 Beta vulgaris HOM05D001074 ORTHO05D001188 3.5e-45 185.7 211 55.0
COL.COLO4_16786 Corchorus olitorius HOM05D001074 ORTHO05D001188 4.3e-35 152.1 192 53.6
Hma1.2p1_1507F.1_g287650 Hydrangea macrophylla HOM05D001074 ORTHO05D001188 5.7e-35 151.8 184 53.3
TWI39G0168 Tripterygium wilfordii HOM05D001074 ORTHO05D001188 3.7e-34 149.1 185 53.0
CSS0024412 Camellia sinensis var. sinensis HOM05D001074 ORTHO05D001188 8.2e-34 147.9 185 51.4
Manes.01G184800 Manihot esculenta HOM05D001074 ORTHO05D001188 1.8e-33 146.7 178 51.1
Actinidia08659 Actinidia chinensis HOM05D001074 ORTHO05D001188 1.3e-31 140.6 185 52.4
PGR142G0617 Punica granatum HOM05D001074 ORTHO05D001188 1.3e-31 140.6 185 51.4
C08p24290 Brassica napus HOM05D001074 ORTHO05D001188 2.2e-31 139.8 181 53.6
BolC8t50045H Brassica oleracea HOM05D001074 ORTHO05D001188 2.2e-31 139.8 181 53.6
Potri.012G016900 Populus trichocarpa HOM05D001074 ORTHO05D001188 2.2e-31 139.8 197 50.3
Haze_00199 Corylus avellana HOM05D001074 ORTHO05D001188 2.9e-31 139.4 188 50.5
MD07G1293000 Malus domestica HOM05D001074 ORTHO05D001188 2.9e-31 139.4 187 49.7
Nn3g18953 Nelumbo nucifera HOM05D001074 ORTHO05D001188 3.8e-31 139.0 180 52.2
BcaC07g39398 Brassica carinata HOM05D001074 ORTHO05D001188 1.1e-30 137.5 181 53.0
QL09p008639 Quercus lobata HOM05D001074 ORTHO05D001188 1.4e-30 137.1 183 49.7
GSVIVG01038564001 Vitis vinifera HOM05D001074 ORTHO05D001188 1.4e-30 137.1 178 52.2
FAN03G0931 Fragaria x ananassa HOM05D001074 ORTHO05D001188 2.5e-30 136.3 185 50.8
FvH4_7g31960 Fragaria vesca HOM05D001074 ORTHO05D001188 3.2e-30 136.0 185 51.4
Duzib084G1329 Durio zibethinus HOM05D001074 ORTHO05D001188 4.2e-30 135.6 185 50.8
FAN10G1322 Fragaria x ananassa HOM05D001074 ORTHO05D001188 4.2e-30 135.6 185 50.8
FAN10G3632 Fragaria x ananassa HOM05D001074 ORTHO05D001188 5.5e-30 135.2 185 50.8
Prupe.2G312800 Prunus persica HOM05D001074 ORTHO05D001188 9.4e-30 134.4 185 49.7
AL5G29020 Arabidopsis lyrata HOM05D001074 ORTHO05D001188 1.2e-29 134.0 179 53.1
SalBow4G3282 Salvia bowleyana HOM05D001074 ORTHO05D001188 1.2e-29 134.0 185 47.6
CSS0010942 Camellia sinensis var. sinensis HOM05D001074 ORTHO05D001188 1.6e-29 133.7 196 46.9
Cfa016241 Carpinus fangiana HOM05D001074 ORTHO05D001188 1.6e-29 133.7 183 50.8
Duzib205G0639 Durio zibethinus HOM05D001074 ORTHO05D001188 1.6e-29 133.7 187 50.3
Sp5g12810 Schrenkiella parvula HOM05D001074 ORTHO05D001188 1.6e-29 133.7 179 53.1
Cc02_g01400 Coffea canephora HOM05D001074 ORTHO05D001188 2.7e-29 132.9 186 48.4
Eucgr.K00391 Eucalyptus grandis HOM05D001074 ORTHO05D001188 2.7e-29 132.9 185 48.1
CANSAT21G0656 Cannabis sativa HOM05D001074 ORTHO05D001188 4.6e-29 132.1 187 50.3
Nitab4.5_0005514g0020 Nicotiana tabacum HOM05D001074 ORTHO05D001188 6.1e-29 131.7 203 44.3
TAR374G1588 Trochodendron aralioides HOM05D001074 ORTHO05D001188 6.1e-29 131.7 186 47.8
arahy.Tifrunner.gnm1.ann1.ADUU08 Arachis hypogaea HOM05D001074 ORTHO05D001188 7.9e-29 131.3 184 49.5
AT3G49290 Arabidopsis thaliana HOM05D001074 ORTHO05D001188 1.0e-28 131.0 179 52.5
Carub.0005s1549 Capsella rubella HOM05D001074 ORTHO05D001188 1.4e-28 130.6 179 52.0
MELO3C008503.2 Cucumis melo HOM05D001074 ORTHO05D001188 1.4e-28 130.6 193 48.2
Nn1g00291 Nelumbo nucifera HOM05D001074 ORTHO05D001188 1.4e-28 130.6 180 49.4
RcHm_v2.0_Chr1g0381461 Rosa chinensis HOM05D001074 ORTHO05D001188 1.8e-28 130.2 181 50.8
PGSC0003DMG400018548 Solanum tuberosum HOM05D001074 ORTHO05D001188 1.8e-28 130.2 184 47.8
A06p18490 Brassica napus HOM05D001074 ORTHO05D001188 2.3e-28 129.8 183 50.3
CAN.G481.24 Capsicum annuum HOM05D001074 ORTHO05D001188 2.3e-28 129.8 184 47.8
MD01G1222400 Malus domestica HOM05D001074 ORTHO05D001188 2.3e-28 129.8 185 49.7
BraA06t24927Z Brassica rapa HOM05D001074 ORTHO05D001188 3.9e-28 129.0 181 51.4
Nitab4.5_0000548g0090 Nicotiana tabacum HOM05D001074 ORTHO05D001188 3.9e-28 129.0 184 47.8
Solyc03g083030.3 Solanum lycopersicum HOM05D001074 ORTHO05D001188 3.9e-28 129.0 184 47.8
Sopen03g022840 Solanum pennellii HOM05D001074 ORTHO05D001188 3.9e-28 129.0 184 47.8
arahy.Tifrunner.gnm1.ann1.T964H7 Arachis hypogaea HOM05D001074 ORTHO05D001188 5.1e-28 128.6 184 48.4
BcaB01g00730 Brassica carinata HOM05D001074 ORTHO05D001188 5.1e-28 128.6 182 52.7
HanXRQChr05g0144191 Helianthus annuus HOM05D001074 ORTHO05D001188 5.1e-28 128.6 180 50.0
Peaxi162Scf00740g00137 Petunia axillaris HOM05D001074 ORTHO05D001188 5.1e-28 128.6 184 46.7
CsaV3_3G019770 Cucumis sativus L. HOM05D001074 ORTHO05D001188 6.7e-28 128.3 193 47.7
Gohir.A12G249100 Gossypium hirsutum HOM05D001074 ORTHO05D001188 6.7e-28 128.3 195 46.7
CiPaw.05G197800 Carya illinoinensis HOM05D001074 ORTHO05D001188 8.8e-28 127.9 185 48.6
Oeu023661.1 Olea europaea HOM05D001074 ORTHO05D001188 8.8e-28 127.9 187 47.1
FAN01G2022 Fragaria x ananassa HOM05D001074 ORTHO05D001188 1.5e-27 127.1 181 49.7
FAN06G1154 Fragaria x ananassa HOM05D001074 ORTHO05D001188 1.5e-27 127.1 181 49.7
Gorai.003G121700 Gossypium raimondii HOM05D001074 ORTHO05D001188 1.5e-27 127.1 188 48.9
HanXRQChr07g0205121 Helianthus annuus HOM05D001074 ORTHO05D001188 2.5e-27 126.3 186 46.2
THA.LOC104814934 Tarenaya hassleriana HOM05D001074 ORTHO05D001188 3.3e-27 125.9 180 48.9
Phvul.009G051500 Phaseolus vulgaris HOM05D001074 ORTHO05D001188 4.3e-27 125.6 185 45.4
Cpa.g.sc3.99 Carica papaya HOM05D001074 ORTHO05D001188 5.7e-27 125.2 179 48.6
Gohir.D03G115500 Gossypium hirsutum HOM05D001074 ORTHO05D001188 5.7e-27 125.2 188 48.4
Ca_16718_v3 Cicer arietinum L. HOM05D001074 ORTHO05D001188 7.4e-27 124.8 186 48.4
ClCG05G009010 Citrullus lanatus HOM05D001074 ORTHO05D001188 7.4e-27 124.8 188 47.3
Migut.F00202 Erythranthe guttata HOM05D001074 ORTHO05D001188 7.4e-27 124.8 189 45.5
AT5G24310 Arabidopsis thaliana HOM05D001074 ORTHO05D001188 9.7e-27 124.4 184 47.8
Gohir.D12G249900 Gossypium hirsutum HOM05D001074 ORTHO05D001188 1.3e-26 124.0 195 45.6
Gorai.008G268000 Gossypium raimondii HOM05D001074 ORTHO05D001188 1.3e-26 124.0 195 45.6
TWI14G0212 Tripterygium wilfordii HOM05D001074 ORTHO05D001188 1.3e-26 124.0 190 47.9
Lj1g0025836 Lotus japonicus HOM05D001074 ORTHO05D001188 1.7e-26 123.6 185 47.0
Manes.05G190200 Manihot esculenta HOM05D001074 ORTHO05D001188 1.7e-26 123.6 178 47.2
Sed0019067 Sechium edule HOM05D001074 ORTHO05D001188 2.2e-26 123.2 186 46.8
Gohir.A03G051700 Gossypium hirsutum HOM05D001074 ORTHO05D001188 2.8e-26 122.9 188 47.9
AL6G35760 Arabidopsis lyrata HOM05D001074 ORTHO05D001188 3.7e-26 122.5 180 47.8
Dinv29266 Davidia involucrata HOM05D001074 ORTHO05D001188 3.7e-26 122.5 139 58.3
Thecc.03G200600 Theobroma cacao HOM05D001074 ORTHO05D001188 3.7e-26 122.5 189 47.6
CARHR189190 Cardamine hirsuta HOM05D001074 ORTHO05D001188 6.3e-26 121.7 162 51.9
ECA233G1696 Erigeron canadensis HOM05D001074 ORTHO05D001188 6.3e-26 121.7 186 46.2
Ca_12785_v3 Cicer arietinum L. HOM05D001074 ORTHO05D001188 8.2e-26 121.3 184 45.7
Glyma.06G130100 Glycine max HOM05D001074 ORTHO05D001188 8.2e-26 121.3 193 46.6
Oeu037054.1 Olea europaea HOM05D001074 ORTHO05D001188 8.2e-26 121.3 185 47.6
Sabra12G0015500 Salix brachista HOM05D001074 ORTHO05D001188 8.2e-26 121.3 189 47.1
Psat6g034880 Pisum sativum HOM05D001074 ORTHO05D001188 1.1e-25 120.9 185 47.0
Aa31LG11G3550 Aethionema arabicum HOM05D001074 ORTHO05D001188 1.4e-25 120.6 178 47.2
Sp2g23040 Schrenkiella parvula HOM05D001074 ORTHO05D001188 1.4e-25 120.6 178 47.2
Sed0019891 Sechium edule HOM05D001074 ORTHO05D001188 1.8e-25 120.2 187 47.1
Glyma.04G234500 Glycine max HOM05D001074 ORTHO05D001188 2.4e-25 119.8 185 45.9
VMungo1309G0031 Vigna mungo HOM05D001074 ORTHO05D001188 3.1e-25 119.4 185 44.9
Glyma.14G138980 Glycine max HOM05D001074 ORTHO05D001188 4.1e-25 119.0 188 46.3
Gohir.A09G184800 Gossypium hirsutum HOM05D001074 ORTHO05D001188 4.1e-25 119.0 178 46.6
TPR.G12056 Trifolium pratense HOM05D001074 ORTHO05D001188 6.9e-25 118.2 184 45.1
Thhalv10010561m.g Eutrema salsugineum HOM05D001074 ORTHO05D001188 9.1e-25 117.9 179 49.2
Medtr1g007880 Medicago truncatula HOM05D001074 ORTHO05D001188 9.1e-25 117.9 186 44.6
MSTRG.8646 Avicennia marina HOM05D001074 ORTHO05D001188 1.5e-24 117.1 189 45.0
Oeu060993.1 Olea europaea HOM05D001074 ORTHO05D001188 3.4e-24 115.9 184 45.7
Atru.chr12.2240 Acer truncatum HOM05D001074 ORTHO05D001188 4.5e-24 115.5 189 46.0
Psat5g076160 Pisum sativum HOM05D001074 ORTHO05D001188 1.3e-23 114.0 189 45.5
Carub.0006s2208 Capsella rubella HOM05D001074 ORTHO05D001188 1.7e-23 113.6 180 46.1
Lsat_1_v5_gn_8_5340 Lactuca sativa HOM05D001074 ORTHO05D001188 2.9e-23 112.8 185 43.8
CiPaw.06G045300 Carya illinoinensis HOM05D001074 ORTHO05D001188 6.5e-23 111.7 184 45.7
Ciclev10021055m.g Citrus clementina HOM05D001074 ORTHO05D001188 6.5e-23 111.7 193 43.5
THA.LOC104798904 Tarenaya hassleriana HOM05D001074 ORTHO05D001188 8.5e-23 111.3 184 47.3
Medtr3g091760 Medicago truncatula HOM05D001074 ORTHO05D001188 1.4e-22 110.5 185 44.3
SGA_v2.0_scaffold44G16811 Striga asiatica HOM05D001074 ORTHO05D001188 4.2e-22 109.0 185 43.2
Lalb_Chr08g0240151 Lupinus albus HOM05D001074 ORTHO05D001188 5.5e-22 108.6 185 41.6
Lalb_Chr11g0066971 Lupinus albus HOM05D001074 ORTHO05D001188 5.5e-22 108.6 186 43.5
DCAR_010594 Daucus carota HOM05D001074 ORTHO05D001188 7.2e-22 108.2 192 43.2
Gorai.006G201700 Gossypium raimondii HOM05D001074 ORTHO05D001188 1.0e-20 104.4 185 42.7
vmacro06391 Vaccinium macrocarpon HOM05D001074 ORTHO05D001188 1.4e-20 104.0 136 55.1
Gohir.D09G179700 Gossypium hirsutum HOM05D001074 ORTHO05D001188 2.3e-20 103.2 185 43.2
Aqoxy2G00703 Aquilegia oxysepala HOM05D001074 ORTHO05D001188 3.0e-20 102.8 180 42.2
Dinv35344 Davidia involucrata HOM05D001074 ORTHO05D001188 8.8e-20 101.3 131 49.6
TPR.G18774 Trifolium pratense HOM05D001074 ORTHO05D001188 1.1e-19 100.9 193 40.4
Thhalv10004602m.g Eutrema salsugineum HOM05D001074 ORTHO05D001188 2.6e-19 99.8 181 42.0
Aa31LG4G17790 Aethionema arabicum HOM05D001074 ORTHO05D001188 3.3e-19 99.4 186 45.7
DCAR_008945 Daucus carota HOM05D001074 ORTHO05D001188 3.3e-19 99.4 196 40.8
TAR636G2195 Trochodendron aralioides HOM05D001074 ORTHO05D001188 9.7e-19 97.8 163 44.2
MBI06_g36470_MAGBIO Magnolia biondii HOM05D001074 ORTHO05D001188 3.7e-18 95.9 186 40.9
BcaNung01222 Brassica carinata HOM05D001074 ORTHO05D001188 1.1e-17 94.4 188 42.0
C07p43460 Brassica napus HOM05D001074 ORTHO05D001188 7.0e-17 91.7 166 44.6
BolC7t44872H Brassica oleracea HOM05D001074 ORTHO05D001188 7.0e-17 91.7 166 44.6
unitig_52.g17716 Utricularia gibba HOM05D001074 ORTHO05D001188 7.0e-17 91.7 193 38.3
Aqoxy7G00062 Aquilegia oxysepala HOM05D001074 ORTHO05D001188 1.5e-16 90.5 165 44.2
Hma1.2p1_3847F.1_g337710 Hydrangea macrophylla HOM05D001074 ORTHO05D001188 2.2e-15 86.7 104 56.7
BraA06t26431Z Brassica rapa HOM05D001074 ORTHO05D001188 6.5e-15 85.1 184 40.8
A06p35110 Brassica napus HOM05D001074 ORTHO05D001188 1.1e-14 84.3 161 44.7
Ah.13g070370 Amaranthus hybridus HOM05D001074 ORTHO05D001188 4.2e-14 82.4 62 72.6
HanXRQChr15g0485711 Helianthus annuus HOM05D001074 ORTHO05D001188 5.5e-14 82.0 165 43.0
Hma1.2p1_0440F.1_g153580 Hydrangea macrophylla HOM05D001074 ORTHO05D001188 7.2e-14 81.6 150 42.0
ECA232G2603 Erigeron canadensis HOM05D001074 ORTHO05D001188 2.7e-13 79.7 166 42.8
TAR371G1026 Trochodendron aralioides HOM05D001074 ORTHO05D001188 3.6e-13 79.3 161 41.0
Aqoxy5G04248 Aquilegia oxysepala HOM05D001074 ORTHO05D001188 3.0e-12 76.3 186 36.6
DCAR_020334 Daucus carota HOM05D001074 ORTHO05D001188 3.0e-12 76.3 188 35.1
TAR633G0488 Trochodendron aralioides HOM05D001074 ORTHO05D001188 3.0e-12 76.3 106 47.2
Cpa.g.sc79.4 Carica papaya HOM05D001074 ORTHO05D001188 1.1e-11 74.3 179 35.8
GSVIVG01019595001 Vitis vinifera HOM05D001074 ORTHO05D001188 1.5e-11 73.9 169 38.5
Atru.chr9.1941 Acer truncatum HOM05D001074 ORTHO05D001188 3.3e-11 72.8 154 39.0
PSO384G4462 Papaver somniferum HOM05D001074 ORTHO05D001188 3.3e-11 72.8 269 33.5
PSO135G0493 Papaver somniferum HOM05D001074 ORTHO05D001188 4.4e-11 72.4 133 48.9
Sabra03G0103400 Salix brachista HOM05D001074 ORTHO05D001188 2.2e-10 70.1 178 37.1
Peaxi162Scf00023g00012 Petunia axillaris HOM05D001074 ORTHO05D001188 1.1e-09 67.8 186 33.3
Lj3C903G13 Lonicera japonica HOM05D001074 ORTHO05D001188 9.1e-09 64.7 60 60.0
Prupe.5G124400 Prunus persica HOM05D001074 ORTHO05D001188 2.6e-08 63.2 154 38.3
Potri.001G088100 Populus trichocarpa HOM05D001074 ORTHO05D001188 5.9e-08 62.0 176 34.1
Rhsim03G0209700 Rhododendron simsii HOM05D001074 ORTHO05D001188 5.9e-08 62.0 53 67.9
TAR633G2202 Trochodendron aralioides HOM05D001074 ORTHO05D002629 1.7e-07 60.5 119 43.7
Lsat_1_v5_gn_9_49760 Lactuca sativa HOM05D001074 ORTHO05D001188 3.8e-07 59.3 184 34.8
Manes.02G006800 Manihot esculenta HOM05D001074 ORTHO05D001188 6.5e-07 58.5 149 33.6
COL.COLO4_10744 Corchorus olitorius HOM05D001074 ORTHO05D001188 1.5e-06 57.4 125 40.0
CiPaw.11G117300 Carya illinoinensis HOM05D001074 ORTHO05D001188 1.9e-06 57.0 138 38.4
Potri.003G142800 Populus trichocarpa HOM05D001074 ORTHO05D001188 7.2e-06 55.1 155 34.2
PGR042G1177 Punica granatum HOM05D001074 ORTHO05D001188 9.4e-06 54.7 142 35.9


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