Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund20877 Selenicereus undatus HOM05D006704 ORTHO05D008635 7.8e-222 773.5 389 100.0
EL10Ac7g15806 Beta vulgaris HOM05D006704 ORTHO05D008635 1.2e-166 590.1 401 76.8
AUR62009778 Chenopodium quinoa HOM05D006704 ORTHO05D008635 8.3e-163 577.4 390 75.4
Ah.08g215840 Amaranthus hybridus HOM05D006704 ORTHO05D008635 7.0e-154 547.7 397 69.3
AUR62039223 Chenopodium quinoa HOM05D006704 ORTHO05D008635 9.1e-154 547.4 390 72.8
Dinv29464 Davidia involucrata HOM05D006704 ORTHO05D008635 5.8e-140 501.5 403 64.0
COL.COLO4_19912 Corchorus olitorius HOM05D006704 ORTHO05D008635 6.4e-139 498.0 392 67.9
Duzib170G0143 Durio zibethinus HOM05D006704 ORTHO05D008635 1.3e-136 490.3 394 66.8
Thecc.09G286000 Theobroma cacao HOM05D006704 ORTHO05D008635 1.5e-135 486.9 390 65.4
Lj3g0010910 Lotus japonicus HOM05D006704 ORTHO05D008635 1.1e-133 480.7 395 62.5
RcHm_v2.0_Chr5g0044201 Rosa chinensis HOM05D006704 ORTHO05D008635 1.4e-133 480.3 401 62.6
GSVIVG01036154001 Vitis vinifera HOM05D006704 ORTHO05D008635 3.1e-133 479.2 328 71.3
FvH4_3g24630 Fragaria vesca HOM05D006704 ORTHO05D008635 5.2e-133 478.4 404 62.6
Gorai.009G086600 Gossypium raimondii HOM05D006704 ORTHO05D008635 6.8e-133 478.0 330 69.4
PGSC0003DMG400007144 Solanum tuberosum HOM05D006704 ORTHO05D008635 8.9e-133 477.6 390 63.6
Gohir.A05G081700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 1.5e-132 476.9 330 69.7
Solyc06g074380.3 Solanum lycopersicum HOM05D006704 ORTHO05D008635 1.5e-132 476.9 390 66.2
DCAR_006157 Daucus carota HOM05D006704 ORTHO05D008635 3.4e-132 475.7 389 62.0
Glyma.11G184500 Glycine max HOM05D006704 ORTHO05D008635 3.4e-132 475.7 392 62.2
TAR633G0569 Trochodendron aralioides HOM05D006704 ORTHO05D008635 3.4e-132 475.7 405 62.7
SalBow6G4963 Salvia bowleyana HOM05D006704 ORTHO05D008635 4.4e-132 475.3 395 63.0
Ciclev10028571m.g Citrus clementina HOM05D006704 ORTHO05D008635 5.8e-132 474.9 372 63.7
Sopen06g030840 Solanum pennellii HOM05D006704 ORTHO05D008635 5.8e-132 474.9 390 65.1
Atru.chr3.3296 Acer truncatum HOM05D006704 ORTHO05D008635 9.8e-132 474.2 395 64.8
TWI31G0547 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 9.8e-132 474.2 333 69.4
CSS0007169 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 1.7e-131 473.4 335 70.1
CSS0018673 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 1.7e-131 473.4 335 70.1
Manes.11G160500 Manihot esculenta HOM05D006704 ORTHO05D008635 1.7e-131 473.4 364 64.8
PGR119G0959 Punica granatum HOM05D006704 ORTHO05D008635 1.7e-131 473.4 400 63.8
TPR.G17210 Trifolium pratense HOM05D006704 ORTHO05D008635 2.2e-131 473.0 334 68.9
Gohir.D05G084700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 2.9e-131 472.6 330 68.8
Psat7g188440 Pisum sativum HOM05D006704 ORTHO05D008635 2.9e-131 472.6 327 67.6
Rhsim13G0110100 Rhododendron simsii HOM05D006704 ORTHO05D008635 2.9e-131 472.6 338 69.2
QL01p012560 Quercus lobata HOM05D006704 ORTHO05D008635 3.7e-131 472.2 404 62.9
Ca_19394_v3 Cicer arietinum L. HOM05D006704 ORTHO05D008635 4.9e-131 471.9 328 68.0
vmacro03306 Vaccinium macrocarpon HOM05D006704 ORTHO05D008635 4.9e-131 471.9 339 68.7
Medtr4g053410 Medicago truncatula HOM05D006704 ORTHO05D008635 6.4e-131 471.5 389 60.7
Potri.004G184400 Populus trichocarpa HOM05D006704 ORTHO05D008635 3.2e-130 469.2 323 69.7
Glyma.12G087800 Glycine max HOM05D006704 ORTHO05D008635 1.2e-129 467.2 392 62.0
Hma1.2p1_0305F.1_g119670 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 1.6e-129 466.8 337 68.5
Sc12g0004410 Simmondsia chinensis HOM05D006704 ORTHO05D008635 1.6e-129 466.8 295 77.3
Nn6g34957 Nelumbo nucifera HOM05D006704 ORTHO05D008635 2.7e-129 466.1 391 63.2
SGA_v2.0_scaffold22G09877 Striga asiatica HOM05D006704 ORTHO05D008635 2.7e-129 466.1 398 60.3
Cfa010042 Carpinus fangiana HOM05D006704 ORTHO05D008635 1.3e-128 463.8 323 67.5
CsaV3_1G014420 Cucumis sativus L. HOM05D006704 ORTHO05D008635 2.3e-128 463.0 393 62.6
Lalb_Chr03g0028021 Lupinus albus HOM05D006704 ORTHO05D008635 3.0e-128 462.6 396 60.4
Nitab4.5_0015718g0010 Nicotiana tabacum HOM05D006704 ORTHO05D008635 5.1e-128 461.8 416 58.9
CAN.G919.21 Capsicum annuum HOM05D006704 ORTHO05D008635 1.1e-127 460.7 390 64.6
Lsat_1_v5_gn_6_40481 Lactuca sativa HOM05D006704 ORTHO05D008635 1.5e-127 460.3 395 61.0
Sabra04G0124100 Salix brachista HOM05D006704 ORTHO05D008635 1.9e-127 459.9 323 68.4
VMungo1127G0699 Vigna mungo HOM05D006704 ORTHO05D008635 3.3e-127 459.1 391 58.8
PSO339G4200 Papaver somniferum HOM05D006704 ORTHO05D008635 4.3e-127 458.8 332 66.9
CANSAT54G0988 Cannabis sativa HOM05D006704 ORTHO05D008635 5.6e-127 458.4 397 61.7
arahy.Tifrunner.gnm1.ann1.JHI8LQ Arachis hypogaea HOM05D006704 ORTHO05D008635 1.2e-126 457.2 393 61.6
Sed0027356 Sechium edule HOM05D006704 ORTHO05D008635 2.1e-126 456.4 325 67.7
arahy.Tifrunner.gnm1.ann1.GMPU9C Arachis hypogaea HOM05D006704 ORTHO05D008635 3.6e-126 455.7 395 60.8
Aqoxy2G01240 Aquilegia oxysepala HOM05D006704 ORTHO05D008635 8.1e-126 454.5 322 67.4
MELO3C004818.2 Cucumis melo HOM05D006704 ORTHO05D008635 8.1e-126 454.5 399 61.7
MD03G1142000 Malus domestica HOM05D006704 ORTHO05D008635 1.4e-125 453.8 391 60.9
Phvul.011G092800 Phaseolus vulgaris HOM05D006704 ORTHO05D008635 1.8e-125 453.4 323 67.5
Nitab4.5_0002002g0020 Nicotiana tabacum HOM05D006704 ORTHO05D008635 2.3e-125 453.0 406 59.1
PSO384G3226 Papaver somniferum HOM05D006704 ORTHO05D008635 3.1e-125 452.6 332 65.7
FAN11G2081 Fragaria x ananassa HOM05D006704 ORTHO05D008635 5.2e-125 451.8 311 68.2
ClCG01G012900 Citrullus lanatus HOM05D006704 ORTHO05D008635 6.8e-125 451.4 402 61.2
Cc01_g09380 Coffea canephora HOM05D006704 ORTHO05D008635 1.5e-124 450.3 328 65.9
MSTRG.18751 Avicennia marina HOM05D006704 ORTHO05D008635 2.0e-124 449.9 322 67.7
THA.LOC104800539 Tarenaya hassleriana HOM05D006704 ORTHO05D008635 3.4e-124 449.1 407 60.0
MBI17_g08127_MAGBIO Magnolia biondii HOM05D006704 ORTHO05D008635 4.4e-124 448.7 326 66.3
AL4G22810 Arabidopsis lyrata HOM05D006704 ORTHO05D008635 5.8e-124 448.4 333 65.8
AT2G27590 Arabidopsis thaliana HOM05D006704 ORTHO05D008635 1.3e-123 447.2 323 66.9
CDE06G2417 Ceratophyllum demersum HOM05D006704 ORTHO05D008635 2.2e-123 446.4 393 59.8
HanXRQChr12g0364591 Helianthus annuus HOM05D006704 ORTHO05D008635 2.9e-123 446.0 398 61.6
Nitab4.5_0002002g0030 Nicotiana tabacum HOM05D006704 ORTHO05D008635 2.9e-123 446.0 390 59.5
FAN21G3586 Fragaria x ananassa HOM05D006704 ORTHO05D008635 3.7e-123 445.7 336 63.7
Carub.0004s0825 Capsella rubella HOM05D006704 ORTHO05D008635 4.9e-123 445.3 338 64.8
Migut.D02353 Erythranthe guttata HOM05D006704 ORTHO05D008635 4.9e-123 445.3 395 61.5
Eucgr.I00893 Eucalyptus grandis HOM05D006704 ORTHO05D008635 8.3e-123 444.5 405 59.8
Peaxi162Scf00091g00118 Petunia axillaris HOM05D006704 ORTHO05D008635 8.3e-123 444.5 327 68.5
Sp4g10410 Schrenkiella parvula HOM05D006704 ORTHO05D008635 1.4e-122 443.7 386 59.8
Thhalv10016700m.g Eutrema salsugineum HOM05D006704 ORTHO05D008635 2.4e-122 443.0 395 60.8
CARHR121470 Cardamine hirsuta HOM05D006704 ORTHO05D008635 7.1e-122 441.4 321 65.1
BcaC02g08239 Brassica carinata HOM05D006704 ORTHO05D008635 5.1e-120 435.3 337 62.9
BcaB06g28156 Brassica carinata HOM05D006704 ORTHO05D008635 8.6e-120 434.5 390 60.3
unitig_37.g12893 Utricularia gibba HOM05D006704 ORTHO05D008635 1.1e-119 434.1 405 57.8
ECA233G1041 Erigeron canadensis HOM05D006704 ORTHO05D008635 1.5e-119 433.7 395 58.7
BolC4t27219H Brassica oleracea HOM05D006704 ORTHO05D008635 2.5e-119 433.0 389 56.8
C04p56860 Brassica napus HOM05D006704 ORTHO05D008635 3.3e-119 432.6 388 57.2
A04p21040 Brassica napus HOM05D006704 ORTHO05D008635 9.6e-119 431.0 391 59.1
BraA04t17672Z Brassica rapa HOM05D006704 ORTHO05D008635 9.6e-119 431.0 391 59.3
Aa31LG5G8320 Aethionema arabicum HOM05D006704 ORTHO05D008635 2.8e-118 429.5 382 59.2
CiPaw.13G137600 Carya illinoinensis HOM05D006704 ORTHO05D008635 2.0e-116 423.3 391 59.6
Zm00001eb147310 Zea mays HOM05D006704 ORTHO05D008635 3.4e-116 422.5 397 54.4
Os01g0858700 Oryza sativa ssp. japonica HOM05D006704 ORTHO05D008635 1.3e-115 420.6 324 63.0
Lj2A980T13 Lonicera japonica HOM05D006704 ORTHO05D008635 1.7e-115 420.2 316 65.8
Haze_23402 Corylus avellana HOM05D006704 ORTHO05D008635 4.2e-114 415.6 434 50.7
HPP92_000003 Vanilla planifolia HOM05D006704 ORTHO05D008635 5.4e-114 415.2 402 55.7
ATR0820G138 Amborella trichopoda HOM05D006704 ORTHO05D008635 1.3e-104 384.0 308 61.7
SEGI_32150 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 1.3e-102 377.5 401 51.4
Prupe.6G127300 Prunus persica HOM05D006704 ORTHO05D008635 2.8e-102 376.3 286 63.6
Cpa.g.sc32.105 Carica papaya HOM05D006704 ORTHO05D008635 6.2e-102 375.2 329 59.6
Mapoly0047s0027 Marchantia polymorpha HOM05D006704 ORTHO05D008635 1.1e-95 354.4 324 54.6
Actinidia07237 Actinidia chinensis HOM05D006704 ORTHO05D008635 2.4e-93 346.7 335 56.4
FAN16G1713 Fragaria x ananassa HOM05D006704 ORTHO05D008635 8.4e-91 338.2 248 64.9
AagrBONN_evm.TU.Sc2ySwM_228.5549 Anthoceros agrestis HOM05D006704 ORTHO05D008635 2.5e-90 336.7 395 48.4
SMO200G0095 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 1.8e-88 330.5 316 52.2
SMO079G0003 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 2.3e-88 330.1 316 52.5
Hma1.2p1_0305F.1_g119660 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 5.1e-80 302.4 301 59.1
TWI79G0085 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 2.1e-33 147.5 102 62.7
Oeu031485.1 Olea europaea HOM05D006704 ORTHO05D008635 6.8e-32 142.5 397 30.7
MD03G1142200 Malus domestica HOM05D006704 ORTHO05D008635 2.0e-31 141.0 93 68.8
VMungo0464G0466 Vigna mungo HOM05D006704 ORTHO05D000044 1.0e-24 118.6 67 79.1
Cpa.g.sc32.104 Carica papaya HOM05D006704 ORTHO05D008635 6.0e-20 102.8 77 58.4
Actinidia24205 Actinidia chinensis HOM05D006704 ORTHO05D008635 8.6e-19 99.0 65 66.2
Cfa010043 Carpinus fangiana HOM05D006704 ORTHO05D008635 2.1e-17 94.4 48 89.6
SEGI_14445 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 3.4e-15 87.0 119 48.7
Migut.D01870 Erythranthe guttata HOM05D006704 ORTHO05D008635 4.9e-14 83.2 74 56.8
QL02p006829 Quercus lobata HOM05D006704 ORTHO05D004198 1.9e-10 71.2 53 62.3


User provided reference genes

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