Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund20831 Selenicereus undatus HOM05D007444 ORTHO05D009359 1.7e-153 546.2 334 100.0
Ah.08g216430 Amaranthus hybridus HOM05D007444 ORTHO05D009359 3.3e-75 286.2 280 59.3
AUR62009843 Chenopodium quinoa HOM05D007444 ORTHO05D009359 2.1e-74 283.5 278 54.7
EL10Ac7g16359 Beta vulgaris HOM05D007444 ORTHO05D009359 2.3e-68 263.5 281 58.0
Sc12g0010310 Simmondsia chinensis HOM05D007444 ORTHO05D009359 1.4e-62 244.2 261 52.1
AUR62038156 Chenopodium quinoa HOM05D007444 ORTHO05D009359 2.4e-62 243.4 192 62.5
Nitab4.5_0000255g0240 Nicotiana tabacum HOM05D007444 ORTHO05D009359 2.7e-61 240.0 275 49.1
Nitab4.5_0005918g0020 Nicotiana tabacum HOM05D007444 ORTHO05D009359 2.3e-57 226.9 275 46.2
Lj9A520T86 Lonicera japonica HOM05D007444 ORTHO05D009359 5.8e-56 222.2 276 45.7
Eucgr.F03140 Eucalyptus grandis HOM05D007444 ORTHO05D009359 7.6e-56 221.9 285 46.3
Sopen06g022180 Solanum pennellii HOM05D007444 ORTHO05D009359 3.2e-54 216.5 272 49.6
CSS0030092 Camellia sinensis var. sinensis HOM05D007444 ORTHO05D009359 1.2e-53 214.5 281 44.5
Actinidia09035 Actinidia chinensis HOM05D007444 ORTHO05D009359 2.7e-53 213.4 264 44.7
Duzib235G0092 Durio zibethinus HOM05D007444 ORTHO05D009359 3.5e-53 213.0 286 44.1
Cc04_g01830 Coffea canephora HOM05D007444 ORTHO05D009359 1.7e-52 210.7 264 44.7
PGSC0003DMG400004847 Solanum tuberosum HOM05D007444 ORTHO05D009359 3.0e-52 209.9 272 48.2
Prupe.3G047900 Prunus persica HOM05D007444 ORTHO05D009359 3.9e-52 209.5 295 44.1
Aqoxy7G01186 Aquilegia oxysepala HOM05D007444 ORTHO05D009359 6.6e-52 208.8 269 44.6
TAR383G0129 Trochodendron aralioides HOM05D007444 ORTHO05D009359 1.5e-51 207.6 280 42.9
vmacro17027 Vaccinium macrocarpon HOM05D007444 ORTHO05D009359 5.6e-51 205.7 266 45.5
FAN09G3948 Fragaria x ananassa HOM05D007444 ORTHO05D009359 7.3e-51 205.3 270 46.7
Ciclev10026127m.g Citrus clementina HOM05D007444 ORTHO05D009359 2.1e-50 203.8 274 47.4
FvH4_6g33680 Fragaria vesca HOM05D007444 ORTHO05D009359 2.8e-50 203.4 278 45.0
CiPaw.02G139200 Carya illinoinensis HOM05D007444 ORTHO05D009359 3.6e-50 203.0 280 42.1
Oeu039953.1 Olea europaea HOM05D007444 ORTHO05D009359 3.6e-50 203.0 281 44.1
TWI36G0277 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 3.6e-50 203.0 271 47.2
TWI36G1725 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 3.6e-50 203.0 271 47.2
Phvul.005G158200 Phaseolus vulgaris HOM05D007444 ORTHO05D009359 8.1e-50 201.8 278 41.7
FAN14G4700 Fragaria x ananassa HOM05D007444 ORTHO05D009359 1.4e-49 201.1 278 44.6
CAN.G825.32 Capsicum annuum HOM05D007444 ORTHO05D009359 6.9e-49 198.7 274 45.6
THA.LOC104815643 Tarenaya hassleriana HOM05D007444 ORTHO05D009359 6.9e-49 198.7 279 41.9
Sed0011511 Sechium edule HOM05D007444 ORTHO05D009359 1.5e-48 197.6 275 40.4
Haze_15975 Corylus avellana HOM05D007444 ORTHO05D009359 2.0e-48 197.2 278 46.4
Glyma.15G024900 Glycine max HOM05D007444 ORTHO05D009359 3.4e-48 196.4 261 43.3
Lalb_Chr14g0372751 Lupinus albus HOM05D007444 ORTHO05D009359 3.4e-48 196.4 285 41.4
RcHm_v2.0_Chr2g0143591 Rosa chinensis HOM05D007444 ORTHO05D009359 5.8e-48 195.7 278 45.0
MD09G1191700 Malus domestica HOM05D007444 ORTHO05D009359 7.6e-48 195.3 270 41.9
QL05p011272 Quercus lobata HOM05D007444 ORTHO05D009359 1.7e-47 194.1 282 42.6
Medtr2g099820 Medicago truncatula HOM05D007444 ORTHO05D009359 4.9e-47 192.6 281 39.9
QL05p011652 Quercus lobata HOM05D007444 ORTHO05D009359 8.4e-47 191.8 284 44.0
PSO017G2704 Papaver somniferum HOM05D007444 ORTHO05D009359 1.1e-46 191.4 280 41.8
MSTRG.4771 Avicennia marina HOM05D007444 ORTHO05D009359 1.4e-46 191.0 277 43.7
Ca_01210_v3 Cicer arietinum L. HOM05D007444 ORTHO05D009359 1.4e-46 191.0 284 39.8
PSO478G1587 Papaver somniferum HOM05D007444 ORTHO05D009359 1.9e-46 190.7 280 42.9
Psat5g292040 Pisum sativum HOM05D007444 ORTHO05D009359 1.9e-46 190.7 268 43.7
AL3G25850 Arabidopsis lyrata HOM05D007444 ORTHO05D009359 2.1e-45 187.2 279 41.2
Migut.D00964 Erythranthe guttata HOM05D007444 ORTHO05D009359 2.1e-45 187.2 261 45.6
Peaxi162Scf00207g00133 Petunia axillaris HOM05D007444 ORTHO05D009359 3.5e-45 186.4 206 47.1
GSVIVG01016873001 Vitis vinifera HOM05D007444 ORTHO05D009359 4.6e-45 186.0 278 41.7
BcaB06g25436 Brassica carinata HOM05D007444 ORTHO05D009359 3.0e-44 183.3 227 44.5
TPR.G6573 Trifolium pratense HOM05D007444 ORTHO05D009359 3.0e-44 183.3 273 38.1
Thhalv10021210m.g Eutrema salsugineum HOM05D007444 ORTHO05D009359 3.9e-44 183.0 264 42.4
A05p35640 Brassica napus HOM05D007444 ORTHO05D009359 3.3e-43 179.9 203 47.3
Cfa003571 Carpinus fangiana HOM05D007444 ORTHO05D009359 3.3e-43 179.9 278 44.2
Manes.11G025100 Manihot esculenta HOM05D007444 ORTHO05D009359 9.6e-43 178.3 269 42.4
COL.COLO4_30661 Corchorus olitorius HOM05D007444 ORTHO05D009359 1.3e-42 177.9 206 44.7
Sp3g11980 Schrenkiella parvula HOM05D007444 ORTHO05D009359 1.3e-42 177.9 279 39.4
SGA_v2.0_scaffold68G22914 Striga asiatica HOM05D007444 ORTHO05D009359 2.8e-42 176.8 276 39.9
Carub.0003s1330 Capsella rubella HOM05D007444 ORTHO05D009359 3.6e-42 176.4 261 43.3
C05p54050 Brassica napus HOM05D007444 ORTHO05D009359 8.1e-42 175.3 273 42.9
BolC5t34070H Brassica oleracea HOM05D007444 ORTHO05D009359 8.1e-42 175.3 273 42.9
AT3G13780 Arabidopsis thaliana HOM05D007444 ORTHO05D009359 1.1e-41 174.9 262 39.3
BraA05t22371Z Brassica rapa HOM05D007444 ORTHO05D009359 1.8e-41 174.1 278 41.4
CsaV3_3G043760 Cucumis sativus L. HOM05D007444 ORTHO05D009359 2.4e-41 173.7 276 38.8
Lj3g0023369 Lotus japonicus HOM05D007444 ORTHO05D009359 2.4e-41 173.7 280 41.1
SalBow7G2527 Salvia bowleyana HOM05D007444 ORTHO05D009359 3.1e-41 173.3 280 40.0
Potri.001G196700 Populus trichocarpa HOM05D007444 ORTHO05D009359 5.3e-41 172.6 278 39.9
DCAR_022704 Daucus carota HOM05D007444 ORTHO05D009359 9.0e-41 171.8 264 39.8
Gohir.D06G198800 Gossypium hirsutum HOM05D007444 ORTHO05D009359 9.0e-41 171.8 279 42.7
Gorai.010G231700 Gossypium raimondii HOM05D007444 ORTHO05D009359 1.2e-40 171.4 280 42.5
Aa31LG8G960 Aethionema arabicum HOM05D007444 ORTHO05D009359 5.8e-40 169.1 257 39.7
CARHR088510 Cardamine hirsuta HOM05D007444 ORTHO05D009359 4.9e-39 166.0 261 41.4
Gohir.A06G190400 Gossypium hirsutum HOM05D007444 ORTHO05D009359 1.1e-38 164.9 284 41.9
Lsat_1_v5_gn_1_35640 Lactuca sativa HOM05D007444 ORTHO05D009359 4.2e-38 162.9 278 40.3
QL05p010974 Quercus lobata HOM05D007444 ORTHO05D009359 2.7e-37 160.2 207 45.4
ClCG07G013830 Citrullus lanatus HOM05D007444 ORTHO05D009359 7.9e-37 158.7 286 36.0
CANSAT56G0761 Cannabis sativa HOM05D007444 ORTHO05D009359 1.3e-36 157.9 282 40.8
Sabra01G0143200 Salix brachista HOM05D007444 ORTHO05D009359 3.9e-36 156.4 241 43.2
arahy.Tifrunner.gnm1.ann1.F397YD Arachis hypogaea HOM05D007444 ORTHO05D009359 1.1e-35 154.8 283 40.6
PGR119G0376 Punica granatum HOM05D007444 ORTHO05D009359 1.5e-35 154.5 205 42.4
MELO3C013088.2 Cucumis melo HOM05D007444 ORTHO05D009359 2.5e-35 153.7 276 39.5
MBI01_g20340_MAGBIO Magnolia biondii HOM05D007444 ORTHO05D009359 7.4e-35 152.1 306 34.6
arahy.Tifrunner.gnm1.ann1.ZV36U3 Arachis hypogaea HOM05D007444 ORTHO05D009359 2.8e-34 150.2 283 39.2
Dinv37906 Davidia involucrata HOM05D007444 ORTHO05D009359 9.0e-33 145.2 167 49.7
Solyc06g062700.3 Solanum lycopersicum HOM05D007444 ORTHO05D009359 1.5e-32 144.4 166 48.8
HanXRQChr02g0031731 Helianthus annuus HOM05D007444 ORTHO05D009359 4.5e-32 142.9 270 41.5
HPP92_005228 Vanilla planifolia HOM05D007444 ORTHO05D009359 1.7e-31 141.0 295 35.6
CDE05G3416 Ceratophyllum demersum HOM05D007444 ORTHO05D009359 3.8e-31 139.8 276 35.9
Cpa.g.sc25.50 Carica papaya HOM05D007444 ORTHO05D009359 7.9e-29 132.1 201 40.8
Rhsim12G0206600 Rhododendron simsii HOM05D007444 ORTHO05D009359 4.8e-26 122.9 165 46.1
Zm00001eb277400 Zea mays HOM05D007444 ORTHO05D009359 7.6e-24 115.5 310 31.6
Hma1.2p1_0496F.1_g165930 Hydrangea macrophylla HOM05D007444 ORTHO05D009359 1.0e-20 105.1 109 49.5
ECA247G2926 Erigeron canadensis HOM05D000045 ORTHO05D000067 4.8e-18 96.3 173 37.6
SEGI_13370 Sequoiadendron giganteum HOM05D007444 ORTHO05D009359 2.0e-16 90.9 293 30.7
ATR0109G024 Amborella trichopoda HOM05D007444 ORTHO05D009359 2.1e-13 80.9 193 33.7
QL05p011362 Quercus lobata HOM05D007444 ORTHO05D009359 4.8e-10 69.7 99 45.5
Os06g0565300 Oryza sativa ssp. japonica HOM05D007444 ORTHO05D009359 5.5e-06 56.2 69 44.9


User provided reference genes

Program Settings