Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund20737 Selenicereus undatus HOM05D003495 ORTHO05D004159 6.6e-63 243.8 118 100.0
EL10Ac6g14290 Beta vulgaris HOM05D003495 ORTHO05D004159 3.3e-54 214.9 118 84.7
AUR62002798 Chenopodium quinoa HOM05D003495 ORTHO05D004159 1.6e-53 212.6 118 83.9
TWI60G0296 Tripterygium wilfordii HOM05D003495 ORTHO05D004159 2.1e-53 212.2 118 83.9
AUR62014105 Chenopodium quinoa HOM05D003495 ORTHO05D004159 8.0e-53 210.3 118 83.1
Sc04g0005950 Simmondsia chinensis HOM05D003495 ORTHO05D004159 8.0e-53 210.3 118 83.9
Atru.chr8.588 Acer truncatum HOM05D003495 ORTHO05D004159 1.4e-52 209.5 118 83.1
MELO3C022060.2 Cucumis melo HOM05D003495 ORTHO05D004159 1.8e-52 209.1 118 83.1
Migut.K00878 Erythranthe guttata HOM05D003495 ORTHO05D004159 1.8e-52 209.1 118 83.1
GSVIVG01036514001 Vitis vinifera HOM05D003495 ORTHO05D004159 1.8e-52 209.1 118 82.2
Actinidia18095 Actinidia chinensis HOM05D003495 ORTHO05D004159 3.1e-52 208.4 118 82.2
CsaV3_5G038800 Cucumis sativus L. HOM05D003495 ORTHO05D004159 3.1e-52 208.4 118 83.1
Medtr6g016215 Medicago truncatula HOM05D003495 ORTHO05D004159 4.0e-52 208.0 118 83.9
Hund25028 Selenicereus undatus HOM05D003495 ORTHO05D004159 4.0e-52 208.0 118 82.2
Aqoxy5G03432 Aquilegia oxysepala HOM05D003495 ORTHO05D004159 5.2e-52 207.6 118 82.2
CSS0005441 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D004159 5.2e-52 207.6 118 82.2
CSS0018508 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D004159 5.2e-52 207.6 118 82.2
Ca_20758_v3 Cicer arietinum L. HOM05D003495 ORTHO05D004159 5.2e-52 207.6 118 83.1
FAN09G4792 Fragaria x ananassa HOM05D003495 ORTHO05D004159 5.2e-52 207.6 118 81.4
Phvul.004G045000 Phaseolus vulgaris HOM05D003495 ORTHO05D004159 5.2e-52 207.6 118 83.1
VMungo0464G0617 Vigna mungo HOM05D003495 ORTHO05D004159 5.2e-52 207.6 118 83.1
FvH4_6g46050 Fragaria vesca HOM05D003495 ORTHO05D004159 6.8e-52 207.2 118 81.4
FAN05G3267 Fragaria x ananassa HOM05D003495 ORTHO05D004159 6.8e-52 207.2 118 81.4
FAN14G1484 Fragaria x ananassa HOM05D003495 ORTHO05D004159 6.8e-52 207.2 118 81.4
RcHm_v2.0_Chr2g0164371 Rosa chinensis HOM05D003495 ORTHO05D004159 6.8e-52 207.2 118 81.4
ClCG11G005050 Citrullus lanatus HOM05D003495 ORTHO05D004159 8.9e-52 206.8 118 82.2
Oeu062191.1 Olea europaea HOM05D003495 ORTHO05D004159 1.5e-51 206.1 118 80.5
PSO063G7059 Papaver somniferum HOM05D003495 ORTHO05D004159 1.5e-51 206.1 118 82.2
Ah.02g128180 Amaranthus hybridus HOM05D003495 ORTHO05D004159 2.0e-51 205.7 119 82.4
FAN02G1990 Fragaria x ananassa HOM05D003495 ORTHO05D004159 2.0e-51 205.7 118 80.5
Sed0005421 Sechium edule HOM05D003495 ORTHO05D004159 2.0e-51 205.7 118 81.4
vmacro05603 Vaccinium macrocarpon HOM05D003495 ORTHO05D004159 2.0e-51 205.7 118 82.2
CSS0004216 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D004159 3.4e-51 204.9 118 80.5
QL02p063585 Quercus lobata HOM05D003495 ORTHO05D004159 3.4e-51 204.9 117 82.1
Actinidia36276 Actinidia chinensis HOM05D003495 ORTHO05D004159 4.4e-51 204.5 118 79.7
Glyma.19G037200 Glycine max HOM05D003495 ORTHO05D004159 4.4e-51 204.5 118 81.4
Lalb_Chr02g0158651 Lupinus albus HOM05D003495 ORTHO05D004159 4.4e-51 204.5 118 81.4
Prupe.3G246500 Prunus persica HOM05D003495 ORTHO05D004159 4.4e-51 204.5 118 79.7
TAR374G0385 Trochodendron aralioides HOM05D003495 ORTHO05D004159 4.4e-51 204.5 118 81.4
Psat1g064160 Pisum sativum HOM05D003495 ORTHO05D004159 5.8e-51 204.1 118 82.2
Ciclev10010888m.g Citrus clementina HOM05D003495 ORTHO05D004159 7.5e-51 203.8 118 81.4
Dinv33880 Davidia involucrata HOM05D003495 ORTHO05D004159 7.5e-51 203.8 118 81.4
Glyma.11G061700 Glycine max HOM05D003495 ORTHO05D004159 7.5e-51 203.8 118 81.4
Lj2g0019402 Lotus japonicus HOM05D003495 ORTHO05D004159 7.5e-51 203.8 118 80.5
Nitab4.5_0002171g0110 Nicotiana tabacum HOM05D003495 ORTHO05D004159 7.5e-51 203.8 118 81.4
Peaxi162Scf00020g02133 Petunia axillaris HOM05D003495 ORTHO05D004159 7.5e-51 203.8 118 81.4
Sed0015478 Sechium edule HOM05D003495 ORTHO05D004159 7.5e-51 203.8 118 80.5
Thecc.02G251800 Theobroma cacao HOM05D003495 ORTHO05D004159 7.5e-51 203.8 118 79.7
ATR0618G126 Amborella trichopoda HOM05D003495 ORTHO05D004159 1.3e-50 203.0 118 79.7
Cc07_g04650 Coffea canephora HOM05D003495 ORTHO05D004159 1.3e-50 203.0 118 81.4
Manes.01G104801 Manihot esculenta HOM05D003495 ORTHO05D004159 1.3e-50 203.0 118 80.5
Nitab4.5_0000154g0080 Nicotiana tabacum HOM05D003495 ORTHO05D004159 1.3e-50 203.0 118 80.5
Nitab4.5_0001397g0040 Nicotiana tabacum HOM05D003495 ORTHO05D004159 1.3e-50 203.0 118 80.5
Peaxi162Scf00479g01011 Petunia axillaris HOM05D003495 ORTHO05D004159 1.3e-50 203.0 118 80.5
MSTRG.3380 Avicennia marina HOM05D003495 ORTHO05D004159 1.7e-50 202.6 118 80.5
DCAR_011000 Daucus carota HOM05D003495 ORTHO05D004159 1.7e-50 202.6 118 81.4
MD09G1077600 Malus domestica HOM05D003495 ORTHO05D004159 2.2e-50 202.2 118 79.7
arahy.Tifrunner.gnm1.ann1.AQF1TQ Arachis hypogaea HOM05D003495 ORTHO05D004159 2.9e-50 201.8 118 80.5
arahy.Tifrunner.gnm1.ann1.BVET7T Arachis hypogaea HOM05D003495 ORTHO05D004159 2.9e-50 201.8 118 80.5
Eucgr.I02084 Eucalyptus grandis HOM05D003495 ORTHO05D004159 2.9e-50 201.8 117 81.2
PSO063G5616 Papaver somniferum HOM05D003495 ORTHO05D004159 2.9e-50 201.8 118 79.7
CANSAT64G2734 Cannabis sativa HOM05D003495 ORTHO05D004159 3.7e-50 201.4 118 78.8
Nitab4.5_0002978g0060 Nicotiana tabacum HOM05D003495 ORTHO05D004159 3.7e-50 201.4 118 80.5
BcaB01g05032 Brassica carinata HOM05D003495 ORTHO05D004159 4.9e-50 201.1 118 79.7
MD17G1067900 Malus domestica HOM05D003495 ORTHO05D004159 8.3e-50 200.3 118 78.8
Aa31LG11G13890 Aethionema arabicum HOM05D003495 ORTHO05D004159 1.1e-49 199.9 118 79.7
CAN.G497.44 Capsicum annuum HOM05D003495 ORTHO05D004159 1.1e-49 199.9 118 79.7
Duzib268G1709 Durio zibethinus HOM05D003495 ORTHO05D004159 1.1e-49 199.9 118 79.7
A03p07290 Brassica napus HOM05D003495 ORTHO05D004159 1.4e-49 199.5 118 79.7
BraA03t10052Z Brassica rapa HOM05D003495 ORTHO05D004159 1.4e-49 199.5 118 79.7
CARHR197650 Cardamine hirsuta HOM05D003495 ORTHO05D004159 1.4e-49 199.5 118 78.8
Sopen03g010670 Solanum pennellii HOM05D003495 ORTHO05D004159 1.4e-49 199.5 118 79.7
SGA_v2.0_scaffold148G36460 Striga asiatica HOM05D003495 ORTHO05D004159 1.4e-49 199.5 118 78.0
BcaC03g18444 Brassica carinata HOM05D003495 ORTHO05D004159 1.9e-49 199.1 118 78.8
BcaNung02199 Brassica carinata HOM05D003495 ORTHO05D004159 1.9e-49 199.1 118 78.8
A02p03170 Brassica napus HOM05D003495 ORTHO05D004159 1.9e-49 199.1 118 78.8
BraA02t05287Z Brassica rapa HOM05D003495 ORTHO05D004159 1.9e-49 199.1 118 78.8
Thhalv10012410m.g Eutrema salsugineum HOM05D003495 ORTHO05D004159 1.9e-49 199.1 118 78.8
THA.LOC104820987 Tarenaya hassleriana HOM05D003495 ORTHO05D004159 1.9e-49 199.1 118 78.8
Lsat_1_v5_gn_4_173941 Lactuca sativa HOM05D003495 ORTHO05D004159 4.1e-49 198.0 118 80.5
Nn7g37976 Nelumbo nucifera HOM05D003495 ORTHO05D004159 7.0e-49 197.2 118 78.0
C03p08360 Brassica napus HOM05D003495 ORTHO05D004159 9.2e-49 196.8 118 78.8
BolC3t13343H Brassica oleracea HOM05D003495 ORTHO05D004159 9.2e-49 196.8 118 78.8
C02p07920 Brassica napus HOM05D003495 ORTHO05D004159 1.2e-48 196.4 118 78.0
BolC2t06715H Brassica oleracea HOM05D003495 ORTHO05D004159 1.2e-48 196.4 118 78.0
HanXRQChr15g0489851 Helianthus annuus HOM05D003495 ORTHO05D004159 1.2e-48 196.4 118 78.8
Solyc02g089370.2 Solanum lycopersicum HOM05D003495 ORTHO05D004159 1.2e-48 196.4 118 78.8
Sopen02g034150 Solanum pennellii HOM05D003495 ORTHO05D004159 1.2e-48 196.4 118 78.8
CSS0011723 Camellia sinensis var. sinensis HOM05D003495 ORTHO05D004159 1.6e-48 196.1 123 76.4
Sp6g28440 Schrenkiella parvula HOM05D003495 ORTHO05D004159 1.6e-48 196.1 118 77.1
Dinv34893 Davidia involucrata HOM05D003495 ORTHO05D004159 2.7e-48 195.3 119 77.3
Gohir.A03G138900 Gossypium hirsutum HOM05D003495 ORTHO05D004159 2.7e-48 195.3 118 76.3
Gorai.005G181800 Gossypium raimondii HOM05D003495 ORTHO05D004159 2.7e-48 195.3 118 76.3
Hma1.2p1_0588F.1_g184640 Hydrangea macrophylla HOM05D003495 ORTHO05D004159 2.7e-48 195.3 119 77.3
Hma1.2p1_2186F.1_g316380 Hydrangea macrophylla HOM05D003495 ORTHO05D004159 2.7e-48 195.3 119 77.3
Cfa007716 Carpinus fangiana HOM05D003495 ORTHO05D004159 3.5e-48 194.9 118 77.1
Gohir.D02G161860 Gossypium hirsutum HOM05D003495 ORTHO05D004159 3.5e-48 194.9 118 75.4
PGR004G1253 Punica granatum HOM05D003495 ORTHO05D004159 3.5e-48 194.9 117 76.9
ECA232G2419 Erigeron canadensis HOM05D003495 ORTHO05D004159 4.6e-48 194.5 118 78.8
Potri.017G106100 Populus trichocarpa HOM05D003495 ORTHO05D004159 4.6e-48 194.5 118 78.0
THA.LOC104802983 Tarenaya hassleriana HOM05D003495 ORTHO05D004159 6.0e-48 194.1 118 77.1
CAN.G563.4 Capsicum annuum HOM05D003495 ORTHO05D004159 1.3e-47 193.0 118 77.1
Haze_14358 Corylus avellana HOM05D003495 ORTHO05D004159 1.3e-47 193.0 118 76.3
AL6G26520 Arabidopsis lyrata HOM05D003495 ORTHO05D004159 5.0e-47 191.0 118 77.1
AT5G15680 Arabidopsis thaliana HOM05D003495 ORTHO05D004159 5.0e-47 191.0 118 77.1
Carub.0006s1383 Capsella rubella HOM05D003495 ORTHO05D004159 5.0e-47 191.0 118 77.1
CiPaw.03G081200 Carya illinoinensis HOM05D003495 ORTHO05D004159 6.6e-47 190.7 118 76.3
HPP92_025566 Vanilla planifolia HOM05D003495 ORTHO05D004159 6.6e-47 190.7 118 77.1
HanXRQChr15g0464911 Helianthus annuus HOM05D003495 ORTHO05D004159 1.1e-46 189.9 117 76.9
TAR622G0597 Trochodendron aralioides HOM05D003495 ORTHO05D004159 1.1e-46 189.9 118 77.1
CDE04G3053 Ceratophyllum demersum HOM05D003495 ORTHO05D004159 1.9e-46 189.1 118 72.9
Duzib248G1077 Durio zibethinus HOM05D003495 ORTHO05D004159 1.9e-46 189.1 118 74.6
Lj4C126G12 Lonicera japonica HOM05D003495 ORTHO05D004159 1.9e-46 189.1 118 77.1
SHI33618 Sapria himalayana HOM05D003495 ORTHO05D004159 9.5e-46 186.8 118 71.2
SEGI_22880 Sequoiadendron giganteum HOM05D003495 ORTHO05D004159 1.8e-44 182.6 118 72.0
unitig_748.g7268 Utricularia gibba HOM05D003495 ORTHO05D004159 2.3e-44 182.2 118 72.9
Os02g0830801 Oryza sativa ssp. japonica HOM05D003495 ORTHO05D004159 4.0e-44 181.4 118 69.5
Zm00001eb190620 Zea mays HOM05D003495 ORTHO05D004159 8.9e-44 180.3 118 71.2
Lsat_1_v5_gn_2_85980 Lactuca sativa HOM05D003495 ORTHO05D004159 1.2e-43 179.9 118 70.3
Mapoly0124s0011 Marchantia polymorpha HOM05D003495 ORTHO05D004159 9.8e-43 176.8 117 71.8
SMO351G0561 Selaginella moellendorffii HOM05D003495 ORTHO05D004159 1.3e-42 176.4 117 69.2
ECA238G4655 Erigeron canadensis HOM05D003495 ORTHO05D004159 3.7e-42 174.9 118 69.5
AagrBONN_evm.TU.Sc2ySwM_228.311 Anthoceros agrestis HOM05D003495 ORTHO05D004159 1.4e-41 172.9 118 69.5
HanXRQChr14g0447961 Helianthus annuus HOM05D003495 ORTHO05D004159 7.1e-41 170.6 118 68.6
Gorai.002G166500 Gossypium raimondii HOM05D003495 ORTHO05D004159 8.4e-34 147.1 131 58.8
Pp3c13_5370 Physcomitrium patens HOM05D003495 ORTHO05D004159 7.8e-32 140.6 117 56.4
Pp3c12_3160 Physcomitrium patens HOM05D003495 ORTHO05D004159 5.1e-31 137.9 118 58.5
Pp3c3_1860 Physcomitrium patens HOM05D003495 ORTHO05D004159 1.5e-30 136.3 118 54.2
TPR.G15949 Trifolium pratense HOM05D003495 ORTHO05D004159 1.1e-28 130.2 118 59.3
Solyc03g046450.3 Solanum lycopersicum HOM05D003495 ORTHO05D004159 4.0e-28 128.3 73 84.9
CBR_g31516 Chara braunii HOM05D003495 ORTHO05D004159 2.1e-24 115.9 116 46.6
Cre17.g703750 Chlamydomonas reinhardtii HOM05D003495 ORTHO05D004159 2.0e-11 72.8 108 32.4
Psat1g055400 Pisum sativum HOM05D003495 ORTHO05D004159 4.5e-11 71.6 39 74.4
arahy.Tifrunner.gnm1.ann1.7VHQ3C Arachis hypogaea HOM05D000394 ORTHO05D013471 8.7e-07 57.4 38 76.3


User provided reference genes

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