Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund20662 Selenicereus undatus HOM05D003956 ORTHO05D004850 0.0e+00 1892.1 956 100.0
Dinv44455 Davidia involucrata HOM05D003956 ORTHO05D004850 0.0e+00 1583.9 968 82.5
TAR365G1004 Trochodendron aralioides HOM05D003956 ORTHO05D004850 0.0e+00 1573.9 978 81.4
Rhsim04G0213100 Rhododendron simsii HOM05D003956 ORTHO05D004850 0.0e+00 1570.4 977 81.7
Atru.chr4.2704 Acer truncatum HOM05D003956 ORTHO05D004850 0.0e+00 1566.6 969 81.6
Duzib212G0153 Durio zibethinus HOM05D003956 ORTHO05D004850 0.0e+00 1565.8 890 87.5
PGR004G0287 Punica granatum HOM05D003956 ORTHO05D004850 0.0e+00 1563.9 889 86.8
GSVIVG01017850001 Vitis vinifera HOM05D003956 ORTHO05D004850 0.0e+00 1563.1 966 81.9
Manes.03G188300 Manihot esculenta HOM05D003956 ORTHO05D004850 0.0e+00 1562.7 967 82.3
Haze_01011 Corylus avellana HOM05D003956 ORTHO05D004850 0.0e+00 1562.0 961 82.4
Glyma.07G253700 Glycine max HOM05D003956 ORTHO05D004850 0.0e+00 1562.0 969 81.1
Prupe.1G146600 Prunus persica HOM05D003956 ORTHO05D004850 0.0e+00 1560.0 970 81.8
CsaV3_3G013930 Cucumis sativus L. HOM05D003956 ORTHO05D004850 0.0e+00 1558.1 891 88.0
Nn3g21184 Nelumbo nucifera HOM05D003956 ORTHO05D004850 0.0e+00 1557.7 984 80.2
Actinidia23451 Actinidia chinensis HOM05D003956 ORTHO05D004850 0.0e+00 1555.0 977 80.8
CiPaw.01G156600 Carya illinoinensis HOM05D003956 ORTHO05D004850 0.0e+00 1554.3 976 80.3
Gorai.011G181800 Gossypium raimondii HOM05D003956 ORTHO05D004850 0.0e+00 1550.8 891 86.5
Sed0002405 Sechium edule HOM05D003956 ORTHO05D004850 0.0e+00 1550.8 891 87.2
Glyma.17G020600 Glycine max HOM05D003956 ORTHO05D004850 0.0e+00 1550.0 968 80.8
QL06p006231 Quercus lobata HOM05D003956 ORTHO05D004850 0.0e+00 1550.0 977 79.8
Cfa015539 Carpinus fangiana HOM05D003956 ORTHO05D004850 0.0e+00 1548.9 968 81.8
Actinidia40209 Actinidia chinensis HOM05D003956 ORTHO05D004850 0.0e+00 1548.5 977 80.7
TWI09G0935 Tripterygium wilfordii HOM05D003956 ORTHO05D004850 0.0e+00 1546.9 943 82.5
Gohir.D10G162900 Gossypium hirsutum HOM05D003956 ORTHO05D004850 0.0e+00 1544.6 891 86.3
Peaxi162Scf00095g00414 Petunia axillaris HOM05D003956 ORTHO05D004850 0.0e+00 1543.1 970 79.6
CANSAT78G1736 Cannabis sativa HOM05D003956 ORTHO05D004850 0.0e+00 1541.9 972 80.1
Potri.010G027800 Populus trichocarpa HOM05D003956 ORTHO05D004850 0.0e+00 1539.6 974 80.1
Eucgr.H03642 Eucalyptus grandis HOM05D003956 ORTHO05D004850 0.0e+00 1539.2 930 82.6
Ciclev10006837m.g Citrus clementina HOM05D003956 ORTHO05D004850 0.0e+00 1538.1 909 84.9
MD16G1179500 Malus domestica HOM05D003956 ORTHO05D004850 0.0e+00 1536.5 959 81.0
Aqoxy2G03183 Aquilegia oxysepala HOM05D003956 ORTHO05D004850 0.0e+00 1534.2 980 79.8
MD13G1177500 Malus domestica HOM05D003956 ORTHO05D004850 0.0e+00 1534.2 993 79.1
Nitab4.5_0000059g0230 Nicotiana tabacum HOM05D003956 ORTHO05D004850 0.0e+00 1534.2 982 78.7
CSS0033563 Camellia sinensis var. sinensis HOM05D003956 ORTHO05D004850 0.0e+00 1533.5 873 86.7
VMungo1215G0684 Vigna mungo HOM05D003956 ORTHO05D004850 0.0e+00 1532.7 891 85.1
Sabra10G0012900 Salix brachista HOM05D003956 ORTHO05D004850 0.0e+00 1531.5 875 86.2
Cc03_g02730 Coffea canephora HOM05D003956 ORTHO05D004850 0.0e+00 1530.4 968 79.4
TPR.G28132 Trifolium pratense HOM05D003956 ORTHO05D004850 0.0e+00 1526.5 966 79.4
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 0.0e+00 1524.6 963 79.4
CAN.G889.10 Capsicum annuum HOM05D003956 ORTHO05D004850 0.0e+00 1521.9 971 79.7
Lj4g0014830 Lotus japonicus HOM05D003956 ORTHO05D004850 0.0e+00 1521.9 978 78.1
Nitab4.5_0010477g0010 Nicotiana tabacum HOM05D003956 ORTHO05D004850 0.0e+00 1520.4 930 81.3
Phvul.003G098200 Phaseolus vulgaris HOM05D003956 ORTHO05D004850 0.0e+00 1517.3 891 84.1
Sopen01g032260 Solanum pennellii HOM05D003956 ORTHO05D004850 0.0e+00 1515.0 974 79.0
Cpa.g.sc16.74 Carica papaya HOM05D003956 ORTHO05D004850 0.0e+00 1513.0 904 83.1
Solyc01g080460.3 Solanum lycopersicum HOM05D003956 ORTHO05D004850 0.0e+00 1511.5 974 78.7
Migut.G00282 Erythranthe guttata HOM05D003956 ORTHO05D004850 0.0e+00 1511.1 875 84.8
ECA240G3955 Erigeron canadensis HOM05D003956 ORTHO05D004850 0.0e+00 1508.0 891 83.8
RcHm_v2.0_Chr4g0420131 Rosa chinensis HOM05D003956 ORTHO05D004850 0.0e+00 1506.9 902 82.7
arahy.Tifrunner.gnm1.ann1.EQKV61 Arachis hypogaea HOM05D003956 ORTHO05D004850 0.0e+00 1506.1 998 77.6
EL10Ac1g01820 Beta vulgaris HOM05D003956 ORTHO05D004850 0.0e+00 1506.1 957 80.4
Lsat_1_v5_gn_5_51481 Lactuca sativa HOM05D003956 ORTHO05D004850 0.0e+00 1506.1 868 84.8
THA.LOC104820228 Tarenaya hassleriana HOM05D003956 ORTHO05D004850 0.0e+00 1504.2 889 82.5
MD13G1177400 Malus domestica HOM05D003956 ORTHO05D004850 0.0e+00 1503.8 869 85.2
FvH4_4g16670 Fragaria vesca HOM05D003956 ORTHO05D004850 0.0e+00 1502.3 901 82.5
MELO3C006585.2 Cucumis melo HOM05D003956 ORTHO05D004850 0.0e+00 1501.5 844 88.5
Aa31LG9G1910 Aethionema arabicum HOM05D003956 ORTHO05D004850 0.0e+00 1497.6 889 83.0
ATR0626G228 Amborella trichopoda HOM05D003956 ORTHO05D004850 0.0e+00 1496.1 957 78.2
FAN22G1243 Fragaria x ananassa HOM05D003956 ORTHO05D004850 0.0e+00 1496.1 901 82.1
Lj3C806G12 Lonicera japonica HOM05D003956 ORTHO05D004850 0.0e+00 1495.7 972 78.3
Lalb_Chr13g0303991 Lupinus albus HOM05D003956 ORTHO05D004850 0.0e+00 1494.9 892 82.6
SalBow2G1708 Salvia bowleyana HOM05D003956 ORTHO05D004850 0.0e+00 1494.9 863 84.4
Thecc.04G272600 Theobroma cacao HOM05D003956 ORTHO05D004850 0.0e+00 1494.9 932 81.4
Nn4g26122 Nelumbo nucifera HOM05D003956 ORTHO05D004850 0.0e+00 1494.6 874 84.7
FAN12G0499 Fragaria x ananassa HOM05D003956 ORTHO05D004850 0.0e+00 1494.2 911 81.6
FAN12G2270 Fragaria x ananassa HOM05D003956 ORTHO05D004850 0.0e+00 1494.2 911 81.6
SGA_v2.0_scaffold142G35643 Striga asiatica HOM05D003956 ORTHO05D004850 0.0e+00 1492.6 879 84.0
arahy.Tifrunner.gnm1.ann1.YQ8C5N Arachis hypogaea HOM05D003956 ORTHO05D004850 0.0e+00 1492.2 845 86.7
Sc25g0004550 Simmondsia chinensis HOM05D003956 ORTHO05D004850 0.0e+00 1491.9 858 86.5
FAN17G1489 Fragaria x ananassa HOM05D003956 ORTHO05D004850 0.0e+00 1491.1 911 81.3
Hma1.2p1_0511F.1_g169230 Hydrangea macrophylla HOM05D003956 ORTHO05D004850 0.0e+00 1490.3 872 84.6
FAN07G1911 Fragaria x ananassa HOM05D003956 ORTHO05D004850 0.0e+00 1489.6 910 81.1
CDE08G0632 Ceratophyllum demersum HOM05D003956 ORTHO05D004850 0.0e+00 1488.8 877 82.7
Duzib151G0049 Durio zibethinus HOM05D003956 ORTHO05D004850 0.0e+00 1486.5 1000 76.6
Psat0ss7919g0200 Pisum sativum HOM05D003956 ORTHO05D004850 0.0e+00 1481.1 858 84.6
MD16G1179300 Malus domestica HOM05D003956 ORTHO05D004850 0.0e+00 1480.7 852 85.3
PSO302G0065 Papaver somniferum HOM05D003956 ORTHO05D004850 0.0e+00 1479.5 970 76.4
MSTRG.10031 Avicennia marina HOM05D003956 ORTHO05D004850 0.0e+00 1475.3 874 83.0
Thhalv10024330m.g Eutrema salsugineum HOM05D003956 ORTHO05D004850 0.0e+00 1474.1 889 82.0
PSO170G3340 Papaver somniferum HOM05D003956 ORTHO05D004850 0.0e+00 1473.4 970 76.3
DCAR_023283 Daucus carota HOM05D003956 ORTHO05D004850 0.0e+00 1473.0 885 82.0
MD16G1179400 Malus domestica HOM05D003956 ORTHO05D004850 0.0e+00 1471.4 852 85.4
Sp7g13780 Schrenkiella parvula HOM05D003956 ORTHO05D004850 0.0e+00 1469.9 890 81.3
arahy.Tifrunner.gnm1.ann1.I3NY02 Arachis hypogaea HOM05D003956 ORTHO05D004850 0.0e+00 1468.4 896 80.7
QL06p005921 Quercus lobata HOM05D003956 ORTHO05D004850 0.0e+00 1468.0 873 82.8
MSTRG.10030 Avicennia marina HOM05D003956 ORTHO05D004850 0.0e+00 1466.8 880 81.8
AL7G39990 Arabidopsis lyrata HOM05D003956 ORTHO05D004850 0.0e+00 1466.1 889 81.7
AT4G15530 Arabidopsis thaliana HOM05D003956 ORTHO05D004850 0.0e+00 1464.1 891 81.3
C01p27430 Brassica napus HOM05D003956 ORTHO05D004850 0.0e+00 1464.1 891 81.1
BcaNung00266 Brassica carinata HOM05D003956 ORTHO05D004850 0.0e+00 1463.7 892 81.1
A01p22040 Brassica napus HOM05D003956 ORTHO05D004850 0.0e+00 1463.7 891 81.0
BraA01t02110Z Brassica rapa HOM05D003956 ORTHO05D004850 0.0e+00 1463.7 891 81.0
CARHR222330 Cardamine hirsuta HOM05D003956 ORTHO05D004850 0.0e+00 1463.7 882 82.3
CDE02G0811 Ceratophyllum demersum HOM05D003956 ORTHO05D004850 0.0e+00 1462.2 899 80.0
BraA03t14011Z Brassica rapa HOM05D003956 ORTHO05D004850 0.0e+00 1459.1 901 80.0
BcaC06g32940 Brassica carinata HOM05D003956 ORTHO05D004850 0.0e+00 1458.7 901 80.2
Ah.11g043140 Amaranthus hybridus HOM05D003956 ORTHO05D004850 0.0e+00 1457.6 950 78.4
C07p47210 Brassica napus HOM05D003956 ORTHO05D004850 0.0e+00 1457.2 901 80.0
Os05g0405000 Oryza sativa ssp. japonica HOM05D003956 ORTHO05D004850 0.0e+00 1456.4 895 80.2
Duzib151G0209 Durio zibethinus HOM05D003956 ORTHO05D004850 0.0e+00 1454.5 873 82.2
BolC1t02682H Brassica oleracea HOM05D003956 ORTHO05D004850 0.0e+00 1454.1 898 80.5
BolC7t45243H Brassica oleracea HOM05D003956 ORTHO05D004850 0.0e+00 1453.3 901 79.7
Thecc.04G272800 Theobroma cacao HOM05D003956 ORTHO05D004850 0.0e+00 1453.0 877 81.9
Hund19586 Selenicereus undatus HOM05D003956 ORTHO05D004850 0.0e+00 1452.2 844 84.4
PGSC0003DMG400032107 Solanum tuberosum HOM05D003956 ORTHO05D004850 0.0e+00 1450.3 843 84.8
Zm00001eb349810 Zea mays HOM05D003956 ORTHO05D004850 0.0e+00 1449.5 880 80.7
BcaC09g50248 Brassica carinata HOM05D003956 ORTHO05D004850 0.0e+00 1443.3 873 81.7
A03p49170 Brassica napus HOM05D003956 ORTHO05D004850 0.0e+00 1441.0 890 79.9
vmacro08238 Vaccinium macrocarpon HOM05D003956 ORTHO05D004850 0.0e+00 1436.0 1094 69.6
ClCG05G005590 Citrullus lanatus HOM05D003956 ORTHO05D004850 0.0e+00 1427.5 880 83.1
Carub.0007s2635 Capsella rubella HOM05D003956 ORTHO05D004850 0.0e+00 1414.4 855 81.6
Rhsim02G0016700 Rhododendron simsii HOM05D003956 ORTHO05D004850 0.0e+00 1406.3 874 80.5
Mapoly0009s0124 Marchantia polymorpha HOM05D003956 ORTHO05D004850 0.0e+00 1402.1 891 77.2
PGR031G3666 Punica granatum HOM05D003956 ORTHO05D004850 0.0e+00 1399.0 860 79.7
AagrBONN_evm.TU.Sc2ySwM_228.3276 Anthoceros agrestis HOM05D003956 ORTHO05D004850 0.0e+00 1394.4 890 77.8
Pp3c5_22540 Physcomitrium patens HOM05D003956 ORTHO05D004850 0.0e+00 1375.1 890 76.7
SMO351G0542 Selaginella moellendorffii HOM05D003956 ORTHO05D004850 0.0e+00 1372.5 872 77.4
arahy.Tifrunner.gnm1.ann1.DC6B04 Arachis hypogaea HOM05D003956 ORTHO05D004850 0.0e+00 1369.8 896 76.6
Actinidia32373 Actinidia chinensis HOM05D003956 ORTHO05D004850 0.0e+00 1367.8 875 79.1
Oeu032695.1 Olea europaea HOM05D003956 ORTHO05D004850 0.0e+00 1360.9 772 87.2
Eucgr.B01186 Eucalyptus grandis HOM05D003956 ORTHO05D004850 0.0e+00 1347.8 823 80.1
unitig_26.g8936 Utricularia gibba HOM05D003956 ORTHO05D004850 0.0e+00 1339.7 872 77.6
Psat4g028880 Pisum sativum HOM05D003956 ORTHO05D004850 0.0e+00 1338.2 803 80.8
CSS0013368 Camellia sinensis var. sinensis HOM05D003956 ORTHO05D004850 0.0e+00 1334.3 803 84.3
CSS0018237 Camellia sinensis var. sinensis HOM05D003956 ORTHO05D004850 0.0e+00 1300.8 886 77.7
Hma1.2p1_2025F.1_g311530 Hydrangea macrophylla HOM05D003956 ORTHO05D004850 0.0e+00 1300.8 870 76.6
vmacro15287 Vaccinium macrocarpon HOM05D003956 ORTHO05D004850 0.0e+00 1279.6 867 74.7
Gohir.A10G105700 Gossypium hirsutum HOM05D003956 ORTHO05D004850 0.0e+00 1265.4 723 86.0
TPR.G28133 Trifolium pratense HOM05D003956 ORTHO05D004850 0.0e+00 1217.2 864 70.9
Zm00001eb287770 Zea mays HOM05D003956 ORTHO05D004850 0.0e+00 1206.0 730 81.2
BcaC09g50243 Brassica carinata HOM05D003956 ORTHO05D004850 0.0e+00 1200.7 779 77.2
Cre17.g734548 Chlamydomonas reinhardtii HOM05D003956 ORTHO05D004850 0.0e+00 1189.5 901 65.7
MCO12G211 Micromonas commoda HOM05D003956 ORTHO05D004850 0.0e+00 1186.8 857 68.6
unitig_749.g14056 Utricularia gibba HOM05D003956 ORTHO05D004850 1.6e-308 1062.8 631 82.7
Cre10.g424750 Chlamydomonas reinhardtii HOM05D003956 ORTHO05D004850 1.2e-300 1036.6 883 60.0
Migut.G00280 Erythranthe guttata HOM05D003956 ORTHO05D004850 6.1e-292 1007.7 581 84.7
Medtr4g118350 Medicago truncatula HOM05D003956 ORTHO05D004850 8.8e-275 950.7 596 77.7
MCO01G687 Micromonas commoda HOM05D003956 ORTHO05D004850 1.6e-255 886.7 908 53.9
AUR62034950 Chenopodium quinoa HOM05D003956 ORTHO05D004850 2.8e-236 822.8 542 77.9
AUR62035455 Chenopodium quinoa HOM05D003956 ORTHO05D004850 6.4e-233 811.6 518 79.7
AUR62035456 Chenopodium quinoa HOM05D003956 ORTHO05D004850 2.5e-221 773.1 497 80.1
AUR62034949 Chenopodium quinoa HOM05D003956 ORTHO05D004850 8.7e-198 694.9 443 80.1
HanXRQChr03g0080571 Helianthus annuus HOM05D003956 ORTHO05D004850 5.1e-190 669.1 401 82.3
CBR_g50184 Chara braunii HOM05D003956 ORTHO05D004850 2.7e-183 646.7 744 49.9
SGA_v2.0_scaffold86G26866 Striga asiatica HOM05D003956 ORTHO05D004850 3.3e-165 586.6 459 67.8
BcaC06g33414 Brassica carinata HOM05D003956 ORTHO05D004850 5.3e-155 552.7 335 82.7
SGA_v2.0_scaffold86G26865 Striga asiatica HOM05D003956 ORTHO05D004850 1.1e-139 501.9 383 67.6
Medtr4g118355 Medicago truncatula HOM05D003956 ORTHO05D004850 1.8e-134 484.6 296 82.4
AUR62034328 Chenopodium quinoa HOM05D003956 ORTHO05D004850 6.4e-116 422.9 415 58.1
arahy.Tifrunner.gnm1.ann1.9WT78J Arachis hypogaea HOM05D003956 ORTHO05D004850 3.3e-104 384.0 313 65.8
HanXRQChr16g0518081 Helianthus annuus HOM05D003956 ORTHO05D004850 4.2e-91 340.5 232 73.3
arahy.Tifrunner.gnm1.ann1.HZTZ4X Arachis hypogaea HOM05D003956 ORTHO05D004850 1.6e-87 328.6 269 64.7
arahy.Tifrunner.gnm1.ann1.7LSJ4G Arachis hypogaea HOM05D003956 ORTHO05D004850 3.2e-67 261.2 219 64.8
arahy.Tifrunner.gnm1.ann1.989M5Y Arachis hypogaea HOM05D003956 ORTHO05D004850 6.3e-63 246.9 213 61.5
unitig_749.g14057 Utricularia gibba HOM05D003956 ORTHO05D004850 3.6e-58 231.1 151 75.5
AagrBONN_evm.TU.Sc2ySwM_362.937 Anthoceros agrestis HOM05D003956 ORTHO05D004850 2.6e-48 198.4 119 79.8
arahy.Tifrunner.gnm1.ann1.S9XVUY Arachis hypogaea HOM05D003956 ORTHO05D004850 1.2e-42 179.5 268 43.3
Pp3c6_6540 Physcomitrium patens HOM05D003956 ORTHO05D004850 1.0e-36 159.8 116 67.2
arahy.Tifrunner.gnm1.ann1.LGH8AH Arachis hypogaea HOM05D003956 ORTHO05D004850 1.1e-30 139.8 83 81.9
BcaC09g50244 Brassica carinata HOM05D003956 ORTHO05D004850 1.1e-30 139.8 85 80.0
GSVIVG01018502001 Vitis vinifera HOM05D003956 ORTHO05D004850 3.1e-30 138.3 81 84.0
Lsat_1_v5_gn_2_81921 Lactuca sativa HOM05D005278 ORTHO05D006500 1.7e-28 132.5 91 68.1
Pp3s196_40 Physcomitrium patens HOM05D003956 ORTHO05D044360 1.5e-24 119.4 427 28.8
arahy.Tifrunner.gnm1.ann1.G5444S Arachis hypogaea HOM05D003956 ORTHO05D004850 3.7e-23 114.8 90 66.7
QL06p005983 Quercus lobata HOM05D003956 ORTHO05D004850 4.9e-23 114.4 130 52.3
TPR.G26738 Trifolium pratense HOM05D003956 ORTHO05D000576 2.8e-18 98.6 56 78.6
TPR.G35464 Trifolium pratense HOM05D003956 ORTHO05D004850 1.3e-15 89.7 60 66.7
arahy.Tifrunner.gnm1.ann1.57CL3B Arachis hypogaea HOM05D003956 ORTHO05D004850 1.5e-11 76.3 51 72.5
arahy.Tifrunner.gnm1.ann1.V4Y3U4 Arachis hypogaea HOM05D003956 ORTHO05D004850 1.9e-11 75.9 49 75.5
arahy.Tifrunner.gnm1.ann1.GGZS5I Arachis hypogaea HOM05D003956 ORTHO05D004850 2.8e-10 72.0 68 60.3
SGA_v2.0_scaffold86G26869 Striga asiatica HOM05D000924 ORTHO05D001209 1.4e-09 69.7 40 87.5
Nn8g40271 Nelumbo nucifera HOM05D001541 ORTHO05D001465 2.3e-09 68.9 59 59.3
HanXRQChr09g0261911 Helianthus annuus HOM05D000495 ORTHO05D000357 1.5e-08 66.2 43 67.4
MBI15_g32557_MAGBIO Magnolia biondii HOM05D001670 ORTHO05D011598 2.6e-08 65.5 49 71.4
Pp3c5_22980 Physcomitrium patens HOM05D003956 ORTHO05D004850 2.6e-08 65.5 43 72.1


User provided reference genes

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