Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund20380 Selenicereus undatus HOM05D006449 ORTHO05D007995 5.5e-65 250.8 120 100.0
Hund26578 Selenicereus undatus HOM05D006449 ORTHO05D007995 8.7e-63 243.4 120 96.7
AUR62040339 Chenopodium quinoa HOM05D006449 ORTHO05D007995 1.6e-53 212.6 120 83.3
AUR62042508 Chenopodium quinoa HOM05D006449 ORTHO05D007995 2.8e-53 211.8 120 83.3
Actinidia08770 Actinidia chinensis HOM05D006449 ORTHO05D007995 3.7e-53 211.5 120 80.0
EL10Ac7g16636 Beta vulgaris HOM05D006449 ORTHO05D007995 3.1e-52 208.4 120 81.7
CsaV3_6G039970 Cucumis sativus L. HOM05D006449 ORTHO05D007995 3.1e-52 208.4 120 80.0
Ca_11505_v3 Cicer arietinum L. HOM05D006449 ORTHO05D007995 4.1e-52 208.0 120 79.2
Manes.09G065800 Manihot esculenta HOM05D006449 ORTHO05D007995 4.1e-52 208.0 120 78.3
CSS0028691 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 9.0e-52 206.8 120 77.5
Nitab4.5_0000814g0040 Nicotiana tabacum HOM05D006449 ORTHO05D007995 9.0e-52 206.8 119 78.2
Nn2g13802 Nelumbo nucifera HOM05D006449 ORTHO05D007995 2.0e-51 205.7 120 77.5
HanXRQChr15g0491571 Helianthus annuus HOM05D006449 ORTHO05D007995 2.6e-51 205.3 120 79.2
Nitab4.5_0003861g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 2.6e-51 205.3 119 78.2
Peaxi162Scf00311g00119 Petunia axillaris HOM05D006449 ORTHO05D007995 3.4e-51 204.9 119 77.3
MSTRG.5764 Avicennia marina HOM05D006449 ORTHO05D007995 5.9e-51 204.1 120 77.5
CAN.G900.29 Capsicum annuum HOM05D006449 ORTHO05D007995 5.9e-51 204.1 119 76.5
PGSC0003DMG400003863 Solanum tuberosum HOM05D006449 ORTHO05D007995 7.7e-51 203.8 119 77.3
ClCG04G009390 Citrullus lanatus HOM05D006449 ORTHO05D007995 1.7e-50 202.6 120 78.3
Glyma.13G142300 Glycine max HOM05D006449 ORTHO05D007995 2.2e-50 202.2 120 77.5
Hma1.2p1_0205F.1_g086990 Hydrangea macrophylla HOM05D006449 ORTHO05D007995 2.2e-50 202.2 120 78.3
Medtr1g063190 Medicago truncatula HOM05D006449 ORTHO05D007995 2.2e-50 202.2 120 75.8
Nn6g35286 Nelumbo nucifera HOM05D006449 ORTHO05D007995 2.2e-50 202.2 120 76.7
Solyc09g008230.3 Solanum lycopersicum HOM05D006449 ORTHO05D007995 2.2e-50 202.2 119 76.5
Sopen09g003050 Solanum pennellii HOM05D006449 ORTHO05D007995 2.2e-50 202.2 119 76.5
CiPaw.10G129500 Carya illinoinensis HOM05D006449 ORTHO05D007995 5.0e-50 201.1 120 75.8
Lj5g0001377 Lotus japonicus HOM05D006449 ORTHO05D007995 5.0e-50 201.1 120 79.2
Psat6g074040 Pisum sativum HOM05D006449 ORTHO05D007995 6.5e-50 200.7 120 75.0
Thecc.05G067500 Theobroma cacao HOM05D006449 ORTHO05D007995 6.5e-50 200.7 120 77.5
Glyma.10G055200 Glycine max HOM05D006449 ORTHO05D007995 1.4e-49 199.5 120 75.0
Oeu041490.2 Olea europaea HOM05D006449 ORTHO05D007995 1.4e-49 199.5 127 74.8
Sed0015731 Sechium edule HOM05D006449 ORTHO05D007995 1.4e-49 199.5 120 75.0
PGR004G0793 Punica granatum HOM05D006449 ORTHO05D007995 2.5e-49 198.7 120 76.7
TPR.G11267 Trifolium pratense HOM05D006449 ORTHO05D007995 3.2e-49 198.4 120 75.8
Duzib093G0849 Durio zibethinus HOM05D006449 ORTHO05D007995 1.2e-48 196.4 120 75.0
Gorai.002G246900 Gossypium raimondii HOM05D006449 ORTHO05D007995 1.6e-48 196.1 120 75.8
TWI74G0214 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 1.6e-48 196.1 118 76.3
TWI77G0881 Tripterygium wilfordii HOM05D006449 ORTHO05D007995 2.1e-48 195.7 118 76.3
Aqoxy1G01150 Aquilegia oxysepala HOM05D006449 ORTHO05D007995 2.7e-48 195.3 120 75.8
Phvul.007G219000 Phaseolus vulgaris HOM05D006449 ORTHO05D007995 2.7e-48 195.3 120 74.2
Peaxi162Scf00638g00414 Petunia axillaris HOM05D006449 ORTHO05D007995 3.6e-48 194.9 119 76.5
VMungo0720G3134 Vigna mungo HOM05D006449 ORTHO05D007995 3.6e-48 194.9 120 75.8
Gohir.A01G213500 Gossypium hirsutum HOM05D006449 ORTHO05D007995 6.1e-48 194.1 120 75.0
ECA248G0052 Erigeron canadensis HOM05D006449 ORTHO05D007995 1.8e-47 192.6 120 76.7
Potri.016G093500 Populus trichocarpa HOM05D006449 ORTHO05D007995 1.8e-47 192.6 123 75.6
CDE09G0874 Ceratophyllum demersum HOM05D006449 ORTHO05D007995 3.0e-47 191.8 120 75.0
DCAR_015000 Daucus carota HOM05D006449 ORTHO05D007995 3.9e-47 191.4 121 74.4
Gohir.D01G202200 Gossypium hirsutum HOM05D006449 ORTHO05D007995 3.9e-47 191.4 120 75.0
RcHm_v2.0_Chr3g0470301 Rosa chinensis HOM05D006449 ORTHO05D007995 8.8e-47 190.3 120 75.8
Atru.chr8.1798 Acer truncatum HOM05D006449 ORTHO05D007995 1.1e-46 189.9 118 74.6
FvH4_6g16440 Fragaria vesca HOM05D006449 ORTHO05D007995 1.5e-46 189.5 121 74.4
Sabra16G0098600 Salix brachista HOM05D006449 ORTHO05D007995 1.5e-46 189.5 123 74.8
GSVIVG01033644001 Vitis vinifera HOM05D006449 ORTHO05D007995 1.5e-46 189.5 121 74.4
FAN05G0981 Fragaria x ananassa HOM05D006449 ORTHO05D007995 2.0e-46 189.1 122 74.6
FAN14G2797 Fragaria x ananassa HOM05D006449 ORTHO05D007995 2.0e-46 189.1 122 74.6
FAN14G3008 Fragaria x ananassa HOM05D006449 ORTHO05D007995 2.0e-46 189.1 122 74.6
THA.LOC104823475 Tarenaya hassleriana HOM05D006449 ORTHO05D007995 2.5e-46 188.7 118 74.6
FAN02G2429 Fragaria x ananassa HOM05D006449 ORTHO05D007995 9.7e-46 186.8 122 73.8
SEGI_04945 Sequoiadendron giganteum HOM05D006449 ORTHO05D007995 1.7e-45 186.0 116 75.0
Os08g0564500 Oryza sativa ssp. japonica HOM05D006449 ORTHO05D007995 2.2e-45 185.7 125 71.2
unitig_749.g14285 Utricularia gibba HOM05D006449 ORTHO05D007995 8.2e-45 183.7 119 73.1
BcaB01g03807 Brassica carinata HOM05D006449 ORTHO05D007995 1.2e-43 179.9 118 71.2
Thhalv10017435m.g Eutrema salsugineum HOM05D006449 ORTHO05D007995 1.2e-43 179.9 115 72.2
Zm00001eb038700 Zea mays HOM05D006449 ORTHO05D007995 1.2e-43 179.9 125 68.8
AL4G33170 Arabidopsis lyrata HOM05D006449 ORTHO05D007995 1.5e-43 179.5 118 70.3
BcaB02g09320 Brassica carinata HOM05D006449 ORTHO05D007995 2.6e-43 178.7 118 70.3
BcaC01g05620 Brassica carinata HOM05D006449 ORTHO05D007995 2.6e-43 178.7 118 70.3
BcaC02g11815 Brassica carinata HOM05D006449 ORTHO05D007995 2.6e-43 178.7 118 70.3
C03p23890 Brassica napus HOM05D006449 ORTHO05D007995 2.6e-43 178.7 118 70.3
BolC3t14781H Brassica oleracea HOM05D006449 ORTHO05D007995 2.6e-43 178.7 118 70.3
Sp4g19220 Schrenkiella parvula HOM05D006449 ORTHO05D007995 2.6e-43 178.7 118 70.3
A03p20330 Brassica napus HOM05D006449 ORTHO05D007995 3.4e-43 178.3 118 70.3
A05p08950 Brassica napus HOM05D006449 ORTHO05D007995 3.4e-43 178.3 118 70.3
C04p11060 Brassica napus HOM05D006449 ORTHO05D007995 3.4e-43 178.3 118 70.3
BolC4t22754H Brassica oleracea HOM05D006449 ORTHO05D007995 3.4e-43 178.3 118 70.3
BraA03t11279Z Brassica rapa HOM05D006449 ORTHO05D007995 3.4e-43 178.3 118 70.3
BraA05t19857Z Brassica rapa HOM05D006449 ORTHO05D007995 3.4e-43 178.3 118 70.3
CSS0018897 Camellia sinensis var. sinensis HOM05D006449 ORTHO05D007995 3.4e-43 178.3 132 65.9
CARHR131400 Cardamine hirsuta HOM05D006449 ORTHO05D007995 3.4e-43 178.3 118 68.6
Lsat_1_v5_gn_1_52340 Lactuca sativa HOM05D006449 ORTHO05D007995 3.4e-43 178.3 120 70.8
AT2G36930 Arabidopsis thaliana HOM05D006449 ORTHO05D007995 1.0e-42 176.8 116 70.7
Carub.0004s1878 Capsella rubella HOM05D006449 ORTHO05D007995 2.2e-42 175.6 118 70.3
Sc20g0005520 Simmondsia chinensis HOM05D006449 ORTHO05D007995 4.4e-38 161.4 86 83.7
SGA_v2.0_scaffold40G15520 Striga asiatica HOM05D006449 ORTHO05D007995 3.7e-37 158.3 91 79.1
HanXRQChr01g0027751 Helianthus annuus HOM05D006449 ORTHO05D007995 4.8e-37 157.9 91 78.0
Cfa017617 Carpinus fangiana HOM05D006449 ORTHO05D007995 1.1e-36 156.8 130 60.8
Rhsim03G0091200 Rhododendron simsii HOM05D006449 ORTHO05D007995 7.0e-36 154.1 91 75.8
Sabra06G0098200 Salix brachista HOM05D006449 ORTHO05D007995 9.1e-36 153.7 92 76.1
SGA_v2.0_scaffold75G24848 Striga asiatica HOM05D006449 ORTHO05D007995 1.2e-35 153.3 119 62.2
Aa31LG5G22150 Aethionema arabicum HOM05D006449 ORTHO05D007995 3.5e-35 151.8 118 62.7
Lalb_Chr02g0155801 Lupinus albus HOM05D006449 ORTHO05D007995 3.5e-35 151.8 88 77.3
MELO3C024474.2 Cucumis melo HOM05D006449 ORTHO05D007995 1.3e-34 149.8 88 76.1
Mapoly0185s0018 Marchantia polymorpha HOM05D006449 ORTHO05D007995 1.3e-34 149.8 115 60.0
QL07p043219 Quercus lobata HOM05D006449 ORTHO05D007995 1.3e-34 149.8 87 74.7
COL.COLO4_26955 Corchorus olitorius HOM05D006449 ORTHO05D007995 3.8e-34 148.3 100 69.0
Nitab4.5_0029554g0010 Nicotiana tabacum HOM05D006449 ORTHO05D007995 6.5e-34 147.5 86 74.4
Cc06_g04250 Coffea canephora HOM05D006449 ORTHO05D007995 1.2e-32 143.3 79 82.3
Pp3c13_22060 Physcomitrium patens HOM05D006449 ORTHO05D007995 2.1e-32 142.5 115 56.5
ATR0219G007 Amborella trichopoda HOM05D006449 ORTHO05D007995 2.7e-32 142.1 88 72.7
arahy.Tifrunner.gnm1.ann1.9GBJ25 Arachis hypogaea HOM05D006449 ORTHO05D007995 4.7e-32 141.4 91 72.5
arahy.Tifrunner.gnm1.ann1.D9FX9P Arachis hypogaea HOM05D006449 ORTHO05D007995 4.7e-32 141.4 91 72.5
CANSAT80G0535 Cannabis sativa HOM05D006449 ORTHO05D007995 8.0e-32 140.6 88 72.7
PSO063G3287 Papaver somniferum HOM05D006449 ORTHO05D007995 1.4e-31 139.8 115 59.1
PSO339G4301 Papaver somniferum HOM05D006449 ORTHO05D007995 1.4e-31 139.8 115 59.1
Migut.J00654 Erythranthe guttata HOM05D006449 ORTHO05D007995 1.5e-30 136.3 86 69.8
Oeu005023.1 Olea europaea HOM05D006449 ORTHO05D007995 2.0e-30 136.0 101 63.4
HPP92_025806 Vanilla planifolia HOM05D006449 ORTHO05D007995 2.6e-30 135.6 90 73.3
MD12G1112600 Malus domestica HOM05D006449 ORTHO05D007995 7.4e-30 134.0 86 70.9
MD00G1155400 Malus domestica HOM05D006449 ORTHO05D007995 4.8e-29 131.3 86 69.8
Potri.006G124100 Populus trichocarpa HOM05D006449 ORTHO05D007995 4.8e-29 131.3 74 81.1
vmacro07293 Vaccinium macrocarpon HOM05D006449 ORTHO05D007995 2.4e-28 129.0 98 63.3
Ciclev10013228m.g Citrus clementina HOM05D006449 ORTHO05D007995 4.1e-28 128.3 84 67.9
Manes.08G011000 Manihot esculenta HOM05D006449 ORTHO05D007995 1.2e-27 126.7 97 64.9
Haze_20546 Corylus avellana HOM05D006449 ORTHO05D007995 2.0e-27 125.9 100 60.0
SMO144G0185 Selaginella moellendorffii HOM05D006449 ORTHO05D007995 4.2e-25 118.2 67 79.1
Prupe.7G129700 Prunus persica HOM05D006449 ORTHO05D007995 7.5e-22 107.5 65 72.3
TAR633G1413 Trochodendron aralioides HOM05D002509 ORTHO05D002758 7.0e-20 100.9 98 57.1
Cre17.g734628 Chlamydomonas reinhardtii HOM05D006449 ORTHO05D007995 4.2e-17 91.7 117 40.2
Lj3A986G82 Lonicera japonica HOM05D006449 ORTHO05D007995 6.1e-16 87.8 120 47.5
PRCOL_00003735 Prasinoderma coloniale HOM05D006449 ORTHO05D007995 1.0e-15 87.0 110 40.9
CBR_g8310 Chara braunii HOM05D006449 ORTHO05D007995 1.3e-13 80.1 51 70.6
MCO09G543 Micromonas commoda HOM05D006449 ORTHO05D007995 2.2e-13 79.3 146 35.6
MSTRG.19181 Avicennia marina HOM05D006449 ORTHO05D007995 3.3e-09 65.5 33 87.9
Thhalv10009663m.g Eutrema salsugineum HOM05D005081 ORTHO05D005506 3.0e-07 58.9 31 83.9
HanXRQChr16g0526221 Helianthus annuus HOM05D006449 ORTHO05D007995 2.0e-06 56.2 30 76.7
unitig_75.g29315 Utricularia gibba HOM05D006449 ORTHO05D007995 2.6e-06 55.8 25 96.0


User provided reference genes

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