Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund20166 Selenicereus undatus HOM05D003265 ORTHO05D003819 0.0e+00 1643.6 886 100.0
AUR62040021 Chenopodium quinoa HOM05D003265 ORTHO05D003819 4.0e-112 410.2 575 50.4
Ah.15g092100 Amaranthus hybridus HOM05D003265 ORTHO05D003819 1.6e-105 388.3 657 45.1
EL10Ac7g17351 Beta vulgaris HOM05D003265 ORTHO05D003819 1.5e-103 381.7 657 46.4
AUR62042920 Chenopodium quinoa HOM05D003265 ORTHO05D003819 1.9e-93 348.2 542 48.3
Sc20g0004060 Simmondsia chinensis HOM05D003265 ORTHO05D003819 1.0e-75 289.3 816 35.0
Cfa017508 Carpinus fangiana HOM05D003265 ORTHO05D003819 8.4e-70 269.6 917 32.9
Haze_20650 Corylus avellana HOM05D003265 ORTHO05D003819 8.7e-67 259.6 917 31.7
Dinv37252 Davidia involucrata HOM05D003265 ORTHO05D003819 4.3e-66 257.3 494 42.3
Dinv35709 Davidia involucrata HOM05D003265 ORTHO05D003819 6.9e-64 250.0 672 36.2
CSS0020316 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 9.6e-58 229.6 650 36.2
QL07p045275 Quercus lobata HOM05D003265 ORTHO05D003819 5.8e-55 220.3 609 36.9
TAR633G0548 Trochodendron aralioides HOM05D003265 ORTHO05D003819 9.9e-55 219.5 625 35.7
Duzib128G1251 Durio zibethinus HOM05D003265 ORTHO05D003819 1.6e-52 212.2 656 33.8
Nitab4.5_0003895g0030 Nicotiana tabacum HOM05D000855 ORTHO05D002321 1.6e-52 212.2 679 35.3
RhsimUnG0118100 Rhododendron simsii HOM05D003265 ORTHO05D003819 3.0e-51 208.0 741 32.3
Nitab4.5_0001142g0090 Nicotiana tabacum HOM05D000855 ORTHO05D002321 4.3e-50 204.1 576 37.0
Migut.L01659 Erythranthe guttata HOM05D003265 ORTHO05D003819 1.3e-49 202.6 581 34.6
CiPaw.10G137500 Carya illinoinensis HOM05D003265 ORTHO05D003819 3.7e-49 201.1 838 31.3
Atru.chr8.2556 Acer truncatum HOM05D003265 ORTHO05D003819 5.3e-48 197.2 741 30.4
TAR623G0684 Trochodendron aralioides HOM05D003265 ORTHO05D003819 9.0e-48 196.4 673 33.6
Prupe.6G241300 Prunus persica HOM05D003265 ORTHO05D003819 1.2e-47 196.1 755 30.9
RcHm_v2.0_Chr3g0468801 Rosa chinensis HOM05D003265 ORTHO05D003819 3.4e-47 194.5 766 31.2
MD12G1124300 Malus domestica HOM05D003265 ORTHO05D003819 1.7e-46 192.2 611 34.4
Gohir.A01G217200 Gossypium hirsutum HOM05D003265 ORTHO05D003819 2.2e-46 191.8 611 34.4
Potri.016G085600 Populus trichocarpa HOM05D003265 ORTHO05D003819 3.8e-46 191.0 694 32.1
MD04G1104400 Malus domestica HOM05D003265 ORTHO05D003819 8.4e-46 189.9 668 33.1
Thecc.05G053900 Theobroma cacao HOM05D003265 ORTHO05D003819 4.2e-45 187.6 646 31.9
COL.COLO4_27082 Corchorus olitorius HOM05D003265 ORTHO05D003819 7.1e-45 186.8 718 30.2
TWI74G1096 Tripterygium wilfordii HOM05D003265 ORTHO05D003819 6.0e-44 183.7 704 32.5
Phvul.001G174800 Phaseolus vulgaris HOM05D003265 ORTHO05D003819 7.9e-44 183.3 571 34.2
Gohir.D01G205900 Gossypium hirsutum HOM05D003265 ORTHO05D003819 6.7e-43 180.3 701 31.0
Solyc09g007340.4 Solanum lycopersicum HOM05D000855 ORTHO05D002321 9.7e-42 176.4 632 33.7
Nn2g12994 Nelumbo nucifera HOM05D003265 ORTHO05D003819 2.8e-41 174.9 540 33.9
FvH4_6g15330 Fragaria vesca HOM05D003265 ORTHO05D003819 3.7e-41 174.5 677 30.9
Sopen09g002240 Solanum pennellii HOM05D003265 ORTHO05D003819 6.3e-41 173.7 575 33.7
Ca_08825_v3 Cicer arietinum L. HOM05D003265 ORTHO05D003819 1.4e-40 172.6 629 32.9
FAN05G5644 Fragaria x ananassa HOM05D003265 ORTHO05D003819 9.0e-40 169.9 743 30.1
Gorai.002G250300 Gossypium raimondii HOM05D003265 ORTHO05D003819 9.0e-40 169.9 704 30.3
Rhsim04G0151400 Rhododendron simsii HOM05D003265 ORTHO05D003819 9.0e-40 169.9 815 30.2
FAN05G5023 Fragaria x ananassa HOM05D003265 ORTHO05D003819 2.6e-39 168.3 675 30.8
Duzib106G1383 Durio zibethinus HOM05D003265 ORTHO05D003819 5.9e-39 167.2 610 32.3
Aqoxy3G02606 Aquilegia oxysepala HOM05D003265 ORTHO05D003819 1.7e-38 165.6 664 31.3
Eucgr.A01175 Eucalyptus grandis HOM05D003265 ORTHO05D003819 1.7e-38 165.6 588 34.9
Glyma.03G177900 Glycine max HOM05D003265 ORTHO05D003819 1.7e-38 165.6 700 30.7
PGR004G1993 Punica granatum HOM05D000855 ORTHO05D002321 1.1e-37 162.9 552 33.5
Manes.08G003400 Manihot esculenta HOM05D003265 ORTHO05D003819 5.5e-37 160.6 539 33.0
SalBow4G0859 Salvia bowleyana HOM05D003265 ORTHO05D003819 7.2e-37 160.2 687 30.9
Cc06_g03550 Coffea canephora HOM05D003265 ORTHO05D003819 9.4e-37 159.8 738 29.9
Psat3g044800 Pisum sativum HOM05D003265 ORTHO05D003819 9.4e-37 159.8 636 32.4
PGSC0003DMG400001737 Solanum tuberosum HOM05D003265 ORTHO05D003819 9.4e-37 159.8 599 33.4
Oeu026844.1 Olea europaea HOM05D003265 ORTHO05D003819 1.2e-36 159.5 707 30.4
MSTRG.26726 Avicennia marina HOM05D003265 ORTHO05D003819 1.6e-36 159.1 676 30.3
Oeu035141.2 Olea europaea HOM05D003265 ORTHO05D003819 4.6e-36 157.5 611 31.3
Nn2g10657 Nelumbo nucifera HOM05D003265 ORTHO05D003819 8.8e-35 153.3 741 29.8
Actinidia13106 Actinidia chinensis HOM05D003265 ORTHO05D003819 1.5e-34 152.5 318 39.6
Lalb_Chr20g0112961 Lupinus albus HOM05D003265 ORTHO05D003819 4.8e-33 147.5 747 30.0
Sabra06G0103300 Salix brachista HOM05D003265 ORTHO05D003819 6.3e-33 147.1 732 31.3
TWI77G0315 Tripterygium wilfordii HOM05D003265 ORTHO05D003819 1.8e-32 145.6 610 32.1
CsaV3_3G035550 Cucumis sativus L. HOM05D003265 ORTHO05D003819 3.1e-32 144.8 642 31.2
SGA_v2.0_scaffold35G14161 Striga asiatica HOM05D003265 ORTHO05D003819 5.3e-32 144.1 676 30.5
VMungo1383G3553 Vigna mungo HOM05D003265 ORTHO05D003819 5.3e-32 144.1 572 30.6
MELO3C009314.2 Cucumis melo HOM05D003265 ORTHO05D003819 9.1e-32 143.3 652 30.2
GSVIVG01016342001 Vitis vinifera HOM05D003265 ORTHO05D003819 5.9e-31 140.6 650 30.8
Ciclev10011133m.g Citrus clementina HOM05D003265 ORTHO05D003819 7.7e-31 140.2 527 30.7
Medtr7g100700 Medicago truncatula HOM05D003265 ORTHO05D003819 7.7e-31 140.2 509 32.6
Dinv04678 Davidia involucrata HOM05D003265 ORTHO05D003819 2.2e-30 138.7 583 30.4
PSO339G3745 Papaver somniferum HOM05D003265 ORTHO05D003819 2.9e-30 138.3 895 27.9
DCAR_017729 Daucus carota HOM05D003265 ORTHO05D003819 1.4e-29 136.0 781 27.9
Sabra16G0092200 Salix brachista HOM05D003265 ORTHO05D003819 1.9e-29 135.6 695 29.2
PSO384G1633 Papaver somniferum HOM05D003265 ORTHO05D003819 2.5e-29 135.2 879 28.0
Lalb_Chr01g0019031 Lupinus albus HOM05D003265 ORTHO05D003819 7.2e-29 133.7 712 28.8
DCAR_014962 Daucus carota HOM05D003265 ORTHO05D003819 1.6e-28 132.5 598 30.1
Psat6g070560 Pisum sativum HOM05D003265 ORTHO05D003819 2.7e-28 131.7 591 32.3
Sed0003387 Sechium edule HOM05D003265 ORTHO05D003819 2.7e-28 131.7 507 32.3
vmacro20061 Vaccinium macrocarpon HOM05D003265 ORTHO05D003819 8.8e-27 126.7 301 34.9
Potri.006G131650 Populus trichocarpa HOM05D003265 ORTHO05D003819 1.5e-26 125.9 899 27.6
FAN09G0144 Fragaria x ananassa HOM05D003265 ORTHO05D003819 2.0e-26 125.6 711 28.3
FAN14G0893 Fragaria x ananassa HOM05D000009 ORTHO05D003819 5.7e-26 124.0 784 28.2
TPR.G36939 Trifolium pratense HOM05D003265 ORTHO05D003819 9.7e-26 123.2 652 27.9
GSVIVG01025624001 Vitis vinifera HOM05D000855 ORTHO05D002321 3.7e-25 121.3 275 37.1
Actinidia05271 Actinidia chinensis HOM05D003265 ORTHO05D003819 8.2e-25 120.2 578 30.3
ClCG10G020560 Citrullus lanatus HOM05D003265 ORTHO05D003819 1.4e-24 119.4 657 29.7
Lj5g0012648 Lotus japonicus HOM05D003265 ORTHO05D003819 2.4e-24 118.6 673 28.8
MSTRG.10296 Avicennia marina HOM05D003265 ORTHO05D003819 1.2e-23 116.3 584 28.6
Gohir.D09G147700 Gossypium hirsutum HOM05D003265 ORTHO05D003819 1.5e-23 115.9 537 29.1
HanXRQChr01g0027471 Helianthus annuus HOM05D003265 ORTHO05D003819 1.5e-23 115.9 707 30.0
HanXRQChr11g0350071 Helianthus annuus HOM05D003265 ORTHO05D003819 2.0e-23 115.5 559 32.0
Lsat_1_v5_gn_1_53881 Lactuca sativa HOM05D003265 ORTHO05D003819 7.7e-23 113.6 510 30.6
Gorai.006G168800 Gossypium raimondii HOM05D003265 ORTHO05D003819 2.2e-22 112.1 645 28.1
SGA_v2.0_scaffold94G28667 Striga asiatica HOM05D003265 ORTHO05D003819 3.8e-22 111.3 675 27.3
Medtr1g066870 Medicago truncatula HOM05D003265 ORTHO05D003819 6.5e-22 110.5 639 30.0
Lj1g0023124 Lotus japonicus HOM05D003265 ORTHO05D003819 8.5e-22 110.2 602 29.2
Peaxi162Scf00005g04612 Petunia axillaris HOM05D003265 ORTHO05D003819 1.4e-21 109.4 616 29.1
ECA248G3421 Erigeron canadensis HOM05D002706 ORTHO05D003253 1.9e-21 109.0 579 31.4
Thecc.10G067600 Theobroma cacao HOM05D003265 ORTHO05D003819 4.2e-21 107.8 651 27.3
Manes.10G042100 Manihot esculenta HOM05D003265 ORTHO05D003819 5.5e-21 107.5 530 29.6
Oeu026065.2 Olea europaea HOM05D003265 ORTHO05D003819 1.6e-20 105.9 664 27.1
Hma1.2p1_0111F.1_g053890 Hydrangea macrophylla HOM05D003265 ORTHO05D003819 2.7e-20 105.1 196 40.8
COL.COLO4_23753 Corchorus olitorius HOM05D003265 ORTHO05D003819 3.6e-20 104.8 694 28.0
TPR.G30247 Trifolium pratense HOM05D003265 ORTHO05D003819 3.0e-19 101.7 565 29.4
Thhalv10010259m.g Eutrema salsugineum HOM05D003265 ORTHO05D003819 5.2e-19 100.9 625 28.0
Carub.0005s1987 Capsella rubella HOM05D003265 ORTHO05D003819 1.5e-18 99.4 568 29.2
GSVIVG01025625001 Vitis vinifera HOM05D003265 ORTHO05D003819 1.5e-18 99.4 214 39.3
Aa31LG10G8510 Aethionema arabicum HOM05D003265 ORTHO05D003819 2.0e-18 99.0 629 27.5
Duzib106G1563 Durio zibethinus HOM05D003265 ORTHO05D003819 4.4e-18 97.8 516 27.9
Manes.09G080700 Manihot esculenta HOM05D003265 ORTHO05D003819 9.7e-18 96.7 439 30.5
AT3G53320 Arabidopsis thaliana HOM05D003265 ORTHO05D003819 1.3e-17 96.3 606 27.6
Glyma.19G178700 Glycine max HOM05D003265 ORTHO05D003819 1.1e-16 93.2 726 25.3
arahy.Tifrunner.gnm1.ann1.1ZS95I Arachis hypogaea HOM05D003265 ORTHO05D003819 9.1e-16 90.1 683 25.6
Gohir.A13G021500 Gossypium hirsutum HOM05D003265 ORTHO05D003819 9.1e-16 90.1 580 29.5
Gorai.013G024900 Gossypium raimondii HOM05D003265 ORTHO05D003819 9.1e-16 90.1 581 28.7
AL5G34230 Arabidopsis lyrata HOM05D003265 ORTHO05D003819 2.0e-15 89.0 612 27.9
Sp5g09010 Schrenkiella parvula HOM05D003265 ORTHO05D003819 2.0e-15 89.0 582 26.6
arahy.Tifrunner.gnm1.ann1.H355B7 Arachis hypogaea HOM05D003265 ORTHO05D003819 2.6e-15 88.6 637 26.4
CAN.G608.11 Capsicum annuum HOM05D003265 ORTHO05D003819 1.0e-14 86.7 316 35.4
Gohir.D13G022100 Gossypium hirsutum HOM05D003265 ORTHO05D003819 1.0e-14 86.7 579 29.0
CSS0008335 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 3.8e-14 84.7 543 28.0
Lj1A924T53 Lonicera japonica HOM05D003265 ORTHO05D003819 5.0e-14 84.3 465 28.0
Potri.008G044500 Populus trichocarpa HOM05D003265 ORTHO05D003819 5.0e-14 84.3 528 28.0
Carub.0004s1895 Capsella rubella HOM05D003265 ORTHO05D003819 5.5e-13 80.9 626 27.6
Ca_11451_v3 Cicer arietinum L. HOM05D003265 ORTHO05D003819 5.5e-13 80.9 557 27.1
Haze_16937 Corylus avellana HOM05D003265 ORTHO05D003819 5.5e-13 80.9 619 26.0
Sabra19G0043100 Salix brachista HOM05D003265 ORTHO05D010313 5.5e-13 80.9 157 38.9
Sabra19G0046300 Salix brachista HOM05D003265 ORTHO05D010313 5.5e-13 80.9 157 38.9
unitig_746.g26760 Utricularia gibba HOM05D003265 ORTHO05D003819 1.6e-12 79.3 168 36.3
Sp4g19390 Schrenkiella parvula HOM05D003265 ORTHO05D003819 4.7e-12 77.8 592 25.5
CSS0002755 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 1.0e-11 76.6 589 27.5
CARHR163240 Cardamine hirsuta HOM05D003265 ORTHO05D003819 1.0e-11 76.6 618 26.9
Potri.010G217000 Populus trichocarpa HOM05D003265 ORTHO05D003819 1.0e-11 76.6 523 27.9
ATR1159G095 Amborella trichopoda HOM05D003265 ORTHO05D003819 1.4e-11 76.3 587 26.6
BcaB06g28974 Brassica carinata HOM05D003265 ORTHO05D003819 2.3e-11 75.5 478 26.8
Thhalv10016413m.g Eutrema salsugineum HOM05D003265 ORTHO05D003819 2.3e-11 75.5 661 25.7
Actinidia38248 Actinidia chinensis HOM05D003265 ORTHO05D003819 3.0e-11 75.1 566 27.9
A09p46340 Brassica napus HOM05D003265 ORTHO05D003819 3.0e-11 75.1 607 26.0
TWI38G2066 Tripterygium wilfordii HOM05D003265 ORTHO05D003819 4.0e-11 74.7 523 27.2
Prupe.2G219100 Prunus persica HOM05D003265 ORTHO05D003819 6.8e-11 73.9 554 28.0
Sabra05G0023700 Salix brachista HOM05D003265 ORTHO05D003819 6.8e-11 73.9 68 58.8
THA.LOC104806495 Tarenaya hassleriana HOM05D003265 ORTHO05D003819 6.8e-11 73.9 763 25.8
Cpa.g.sc53.18 Carica papaya HOM05D003265 ORTHO05D003819 1.2e-10 73.2 497 29.4
Gohir.D11G344100 Gossypium hirsutum HOM05D003265 ORTHO05D003819 1.2e-10 73.2 559 24.7
Gorai.007G374500 Gossypium raimondii HOM05D003265 ORTHO05D003819 1.2e-10 73.2 559 24.7
BraA09t40099Z Brassica rapa HOM05D003265 ORTHO05D003819 2.0e-10 72.4 611 25.7
QL08p056892 Quercus lobata HOM05D003265 ORTHO05D003819 2.6e-10 72.0 610 24.8
SHI12573 Sapria himalayana HOM05D003265 ORTHO05D003819 2.6e-10 72.0 645 28.2
AL4G33420 Arabidopsis lyrata HOM05D003265 ORTHO05D003819 3.4e-10 71.6 635 25.2
FAN03G0618 Fragaria x ananassa HOM05D003265 ORTHO05D003819 4.4e-10 71.2 545 26.6
TWI63G0250 Tripterygium wilfordii HOM05D003265 ORTHO05D003819 4.4e-10 71.2 516 28.7
FAN06G4411 Fragaria x ananassa HOM05D000122 ORTHO05D003819 7.5e-10 70.5 160 35.0
BcaC07g39697 Brassica carinata HOM05D003265 ORTHO05D003819 9.7e-10 70.1 593 26.5
BolC8t50462H Brassica oleracea HOM05D003265 ORTHO05D003819 9.7e-10 70.1 593 26.5
Lalb_Chr06g0171401 Lupinus albus HOM05D003265 ORTHO05D003819 1.3e-09 69.7 69 58.0
C08p28530 Brassica napus HOM05D003265 ORTHO05D003819 2.2e-09 68.9 611 26.4
Gohir.A11G325100 Gossypium hirsutum HOM05D003265 ORTHO05D003819 2.2e-09 68.9 559 24.7
CDE07G1131 Ceratophyllum demersum HOM05D003265 ORTHO05D003819 2.8e-09 68.6 614 24.3
CiPaw.01G276700 Carya illinoinensis HOM05D003265 ORTHO05D003819 3.7e-09 68.2 613 26.9
Sabra19G0043200 Salix brachista HOM05D009213 ORTHO05D010313 3.7e-09 68.2 68 58.8
Sed0024874 Sechium edule HOM05D003265 ORTHO05D003819 3.7e-09 68.2 654 26.6
CDE04G0439 Ceratophyllum demersum HOM05D000106 ORTHO05D003819 6.3e-09 67.4 607 25.5
Sabra08G0030800 Salix brachista HOM05D003265 ORTHO05D003819 8.3e-09 67.0 534 26.2
Cpa.g.sc114.39 Carica papaya HOM05D000666 ORTHO05D001431 1.1e-08 66.6 340 27.9
Cfa001593 Carpinus fangiana HOM05D003265 ORTHO05D003819 1.1e-08 66.6 599 26.7
FvH4_7g20180 Fragaria vesca HOM05D003265 ORTHO05D003819 1.4e-08 66.2 533 26.8
Lj2A107T58 Lonicera japonica HOM05D003265 ORTHO05D003819 1.8e-08 65.9 492 26.8
BcaB01g00290 Brassica carinata HOM05D003265 ORTHO05D003819 2.4e-08 65.5 616 25.8
CSS0006813 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 3.1e-08 65.1 560 27.3
Actinidia05272 Actinidia chinensis HOM05D003265 ORTHO05D003819 4.1e-08 64.7 106 38.7
Aa31LG5G22370 Aethionema arabicum HOM05D003265 ORTHO05D003819 1.6e-07 62.8 588 25.5
Os05g0121800 Oryza sativa ssp. japonica HOM05D003265 ORTHO05D003819 1.6e-07 62.8 552 26.6
CSS0047156 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 4.5e-07 61.2 170 32.9
MD07G1179700 Malus domestica HOM05D003265 ORTHO05D003819 4.5e-07 61.2 558 27.1
CARHR131570 Cardamine hirsuta HOM05D003265 ORTHO05D003819 7.7e-07 60.5 596 26.3
Sed0014651 Sechium edule HOM05D003265 ORTHO05D003819 1.3e-06 59.7 527 25.0
CSS0013290 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 1.7e-06 59.3 588 27.4
CSS0011554 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 2.2e-06 58.9 170 33.5
ClCG09G020420 Citrullus lanatus HOM05D003265 ORTHO05D003819 2.2e-06 58.9 489 24.7
Actinidia13105 Actinidia chinensis HOM05D003265 ORTHO05D003819 3.8e-06 58.2 389 26.0


User provided reference genes

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