Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund20101 Selenicereus undatus HOM05D003670 ORTHO05D004767 1.9e-206 722.2 356 100.0
EL10Ac2g03264 Beta vulgaris HOM05D003670 ORTHO05D004767 9.9e-163 577.0 378 78.3
AUR62037644 Chenopodium quinoa HOM05D003670 ORTHO05D004767 3.0e-159 565.5 379 75.7
AUR62039184 Chenopodium quinoa HOM05D003670 ORTHO05D004767 3.0e-159 565.5 379 75.7
Ah.10g033690 Amaranthus hybridus HOM05D003670 ORTHO05D004767 3.4e-155 552.0 401 72.8
Nitab4.5_0006241g0010 Nicotiana tabacum HOM05D003670 ORTHO05D004767 7.8e-152 540.8 376 71.0
GSVIVG01036786001 Vitis vinifera HOM05D003670 ORTHO05D004767 3.3e-150 535.4 376 69.4
Hma1.2p1_0151F.1_g067325 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 5.6e-150 534.6 377 70.8
DCAR_019919 Daucus carota HOM05D003670 ORTHO05D004767 9.6e-150 533.9 356 73.6
Lsat_1_v5_gn_7_110680 Lactuca sativa HOM05D003670 ORTHO05D004767 1.2e-147 526.9 376 71.5
MD10G1208500 Malus domestica HOM05D003670 ORTHO05D004767 1.2e-147 526.9 376 69.1
Lj3g0014239 Lotus japonicus HOM05D003670 ORTHO05D004767 2.0e-147 526.2 377 69.8
Potri.007G069300 Populus trichocarpa HOM05D003670 ORTHO05D004767 2.0e-147 526.2 377 69.5
CiPaw.11G061900 Carya illinoinensis HOM05D003670 ORTHO05D004767 3.4e-147 525.4 377 68.7
Glyma.08G167100 Glycine max HOM05D003670 ORTHO05D004767 3.4e-147 525.4 380 69.5
QL04p088520 Quercus lobata HOM05D003670 ORTHO05D004767 4.4e-147 525.0 402 65.7
CSS0006756 Camellia sinensis var. sinensis HOM05D003670 ORTHO05D004767 9.9e-147 523.9 379 70.7
Nitab4.5_0000029g0340 Nicotiana tabacum HOM05D003670 ORTHO05D004767 9.9e-147 523.9 376 70.2
Peaxi162Scf00452g00333 Petunia axillaris HOM05D003670 ORTHO05D004767 1.3e-146 523.5 376 69.9
Migut.H01671 Erythranthe guttata HOM05D003670 ORTHO05D004767 1.7e-146 523.1 381 69.3
TAR583G0001 Trochodendron aralioides HOM05D003670 ORTHO05D004767 2.9e-146 522.3 372 69.6
Ciclev10005196m.g Citrus clementina HOM05D003670 ORTHO05D004767 3.8e-146 521.9 377 69.8
FvH4_3g14990 Fragaria vesca HOM05D003670 ORTHO05D004767 3.8e-146 521.9 378 69.8
FAN11G2825 Fragaria x ananassa HOM05D003670 ORTHO05D004767 6.4e-146 521.2 378 69.8
PGR031G1669 Punica granatum HOM05D003670 ORTHO05D004767 8.4e-146 520.8 380 68.9
Rhsim06G0242300 Rhododendron simsii HOM05D003670 ORTHO05D004767 1.4e-145 520.0 400 66.8
Psat1g013760 Pisum sativum HOM05D003670 ORTHO05D004767 1.9e-145 519.6 375 68.5
CAN.G943.51 Capsicum annuum HOM05D003670 ORTHO05D004767 4.2e-145 518.5 378 69.6
FAN21G1395 Fragaria x ananassa HOM05D003670 ORTHO05D004767 1.6e-144 516.5 378 69.3
Gohir.D13G127300 Gossypium hirsutum HOM05D003670 ORTHO05D004767 1.6e-144 516.5 376 68.1
Phvul.005G050400 Phaseolus vulgaris HOM05D003670 ORTHO05D004767 1.6e-144 516.5 380 68.4
Gohir.A13G123400 Gossypium hirsutum HOM05D003670 ORTHO05D004767 2.7e-144 515.8 376 67.6
Cc05_g16310 Coffea canephora HOM05D003670 ORTHO05D004767 4.6e-144 515.0 378 68.5
Manes.06G175700 Manihot esculenta HOM05D003670 ORTHO05D004767 4.6e-144 515.0 377 68.2
MD05G1228000 Malus domestica HOM05D003670 ORTHO05D004767 6.0e-144 514.6 377 68.2
Medtr2g067080 Medicago truncatula HOM05D003670 ORTHO05D004767 7.9e-144 514.2 377 68.7
FAN25G1710 Fragaria x ananassa HOM05D003670 ORTHO05D004767 1.0e-143 513.8 392 67.1
MBI02_g18168_MAGBIO Magnolia biondii HOM05D003670 ORTHO05D004767 1.0e-143 513.8 372 68.5
Prupe.4G134300 Prunus persica HOM05D003670 ORTHO05D004767 1.0e-143 513.8 378 68.8
RcHm_v2.0_Chr5g0024611 Rosa chinensis HOM05D003670 ORTHO05D004767 1.0e-143 513.8 377 67.6
Gorai.013G142500 Gossypium raimondii HOM05D003670 ORTHO05D004767 1.3e-143 513.5 377 67.9
TPR.G33813 Trifolium pratense HOM05D003670 ORTHO05D004767 1.7e-143 513.1 376 68.1
Sopen07g034740 Solanum pennellii HOM05D003670 ORTHO05D004767 2.3e-143 512.7 380 69.5
Nitab4.5_0005765g0040 Nicotiana tabacum HOM05D003670 ORTHO05D004767 3.0e-143 512.3 377 68.4
Solyc07g066580.3 Solanum lycopersicum HOM05D003670 ORTHO05D004767 6.6e-143 511.1 378 70.6
TWI39G0091 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 6.6e-143 511.1 377 67.9
HanXRQChr11g0335601 Helianthus annuus HOM05D003670 ORTHO05D004767 1.9e-142 509.6 376 69.1
PGSC0003DMG400022232 Solanum tuberosum HOM05D003670 ORTHO05D004767 1.9e-142 509.6 380 69.5
VMungo1080G1660 Vigna mungo HOM05D003670 ORTHO05D004767 2.5e-142 509.2 372 69.1
Lalb_Chr25g0284691 Lupinus albus HOM05D003670 ORTHO05D004767 5.6e-142 508.1 378 67.5
Manes.14G010300 Manihot esculenta HOM05D003670 ORTHO05D004767 9.6e-142 507.3 373 67.6
Thecc.07G180400 Theobroma cacao HOM05D003670 ORTHO05D004767 1.3e-141 506.9 378 68.0
COL.COLO4_32264 Corchorus olitorius HOM05D003670 ORTHO05D004767 8.1e-141 504.2 318 75.8
ECA236G3562 Erigeron canadensis HOM05D003670 ORTHO05D004767 4.0e-140 501.9 316 75.9
Ca_03600_v3 Cicer arietinum L. HOM05D003670 ORTHO05D004767 5.3e-140 501.5 368 67.9
TWI38G1711 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 6.9e-140 501.1 374 67.9
MSTRG.14566 Avicennia marina HOM05D003670 ORTHO05D004767 1.2e-139 500.4 379 67.3
Aqoxy1G01484 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 2.6e-139 499.2 376 66.5
AL2G39700 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 2.6e-139 499.2 375 67.2
CARHR016930 Cardamine hirsuta HOM05D003670 ORTHO05D004767 2.6e-139 499.2 379 68.1
Eucgr.F04458 Eucalyptus grandis HOM05D003670 ORTHO05D004767 4.5e-139 498.4 379 65.4
Oeu002796.1 Olea europaea HOM05D003670 ORTHO05D004767 4.5e-139 498.4 322 73.3
Peaxi162Scf00006g00159 Petunia axillaris HOM05D003670 ORTHO05D004767 9.9e-139 497.3 376 66.2
Nn7g37780 Nelumbo nucifera HOM05D003670 ORTHO05D004767 1.3e-138 496.9 321 75.4
Aa31LG4G1790 Aethionema arabicum HOM05D003670 ORTHO05D004767 1.7e-138 496.5 330 73.3
Sp5g34280 Schrenkiella parvula HOM05D003670 ORTHO05D004767 4.9e-138 495.0 375 68.0
CsaV3_3G018980 Cucumis sativus L. HOM05D003670 ORTHO05D004767 6.4e-138 494.6 381 65.4
ATR0763G120 Amborella trichopoda HOM05D003670 ORTHO05D004767 1.1e-137 493.8 374 66.0
CANSAT80G2697 Cannabis sativa HOM05D003670 ORTHO05D004767 1.4e-137 493.4 378 65.1
Duzib187G0441 Durio zibethinus HOM05D003670 ORTHO05D004767 1.9e-137 493.0 318 73.9
Thhalv10018699m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 3.2e-137 492.3 378 66.9
THA.LOC104812362 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 3.2e-137 492.3 378 66.7
Sabra07G0056700 Salix brachista HOM05D003670 ORTHO05D004767 5.4e-137 491.5 397 64.5
Sed0012107 Sechium edule HOM05D003670 ORTHO05D004767 5.4e-137 491.5 379 64.1
AT1G79230 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 9.3e-137 490.7 375 65.9
Sc06g0002800 Simmondsia chinensis HOM05D003670 ORTHO05D004767 1.2e-136 490.3 346 72.5
PSO675G6901 Papaver somniferum HOM05D003670 ORTHO05D004767 1.6e-136 490.0 377 64.5
PSO541G1524 Papaver somniferum HOM05D003670 ORTHO05D004767 1.3e-135 486.9 377 63.7
BraA07t31943Z Brassica rapa HOM05D003670 ORTHO05D004767 2.3e-135 486.1 377 65.3
Carub.0001s1620 Capsella rubella HOM05D003670 ORTHO05D004767 5.1e-135 485.0 381 65.4
CARHR072860 Cardamine hirsuta HOM05D003670 ORTHO05D004767 5.1e-135 485.0 306 75.5
Potri.005G095300 Populus trichocarpa HOM05D003670 ORTHO05D004767 6.7e-135 484.6 300 76.7
THA.LOC104813608 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 6.7e-135 484.6 375 65.9
A07p27230 Brassica napus HOM05D003670 ORTHO05D004767 8.7e-135 484.2 377 66.0
BraA07t30367Z Brassica rapa HOM05D003670 ORTHO05D004767 8.7e-135 484.2 377 66.0
Carub.0002s2610 Capsella rubella HOM05D003670 ORTHO05D004767 1.1e-134 483.8 378 65.6
A07p44350 Brassica napus HOM05D003670 ORTHO05D004767 1.5e-134 483.4 376 64.6
BcaB05g25180 Brassica carinata HOM05D003670 ORTHO05D004767 1.9e-134 483.0 319 74.3
Zm00001eb031400 Zea mays HOM05D003670 ORTHO05D004767 2.5e-134 482.6 317 72.6
BolC6t38160H Brassica oleracea HOM05D003670 ORTHO05D004767 9.6e-134 480.7 377 65.5
Cfa022976 Carpinus fangiana HOM05D003670 ORTHO05D004767 2.1e-133 479.6 377 63.7
BcaB02g07206 Brassica carinata HOM05D003670 ORTHO05D004767 6.2e-133 478.0 377 65.8
BcaC08g45368 Brassica carinata HOM05D003670 ORTHO05D004767 8.1e-133 477.6 377 65.3
C06p30000 Brassica napus HOM05D003670 ORTHO05D004767 8.1e-133 477.6 377 65.3
BolC5t30186H Brassica oleracea HOM05D003670 ORTHO05D004767 8.1e-133 477.6 382 64.1
Thhalv10007910m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 1.1e-132 477.2 318 72.6
Solyc02g078990.4 Solanum lycopersicum HOM05D003670 ORTHO05D004767 1.1e-132 477.2 325 70.8
Os12g0608600 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 1.8e-132 476.5 313 72.2
BcaB02g06624 Brassica carinata HOM05D003670 ORTHO05D004767 2.4e-132 476.1 319 72.1
BcaC05g25571 Brassica carinata HOM05D003670 ORTHO05D004767 3.1e-132 475.7 382 64.4
unitig_578.g16333 Utricularia gibba HOM05D003670 ORTHO05D004767 4.0e-132 475.3 324 68.8
C05p14650 Brassica napus HOM05D003670 ORTHO05D004767 6.9e-132 474.6 382 63.9
Lj2A15G76 Lonicera japonica HOM05D003670 ORTHO05D004767 9.0e-132 474.2 327 72.2
vmacro11699 Vaccinium macrocarpon HOM05D003670 ORTHO05D004767 9.0e-132 474.2 346 68.8
Sopen02g023800 Solanum pennellii HOM05D003670 ORTHO05D004767 2.0e-131 473.0 305 74.1
Sabra05G0078800 Salix brachista HOM05D003670 ORTHO05D004767 7.6e-131 471.1 344 68.3
AL1G28600 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 2.2e-130 469.5 308 73.7
Glyma.15G260300 Glycine max HOM05D003670 ORTHO05D004767 1.9e-129 466.5 348 68.4
BraA06t24401Z Brassica rapa HOM05D003670 ORTHO05D004767 3.2e-129 465.7 382 63.6
HPP92_013192 Vanilla planifolia HOM05D003670 ORTHO05D004767 3.2e-129 465.7 384 60.4
Aa31LG7G1000 Aethionema arabicum HOM05D003670 ORTHO05D004767 2.1e-128 463.0 317 70.3
ClCG05G009800 Citrullus lanatus HOM05D003670 ORTHO05D000003 2.7e-128 462.6 357 64.4
Sp1g14610 Schrenkiella parvula HOM05D003670 ORTHO05D004767 6.0e-128 461.5 320 69.7
A06p12380 Brassica napus HOM05D003670 ORTHO05D004767 5.1e-127 458.4 378 62.4
AT1G16460 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 2.8e-125 452.6 317 70.3
Oeu043724.2 Olea europaea HOM05D003670 ORTHO05D004767 1.4e-124 450.3 325 67.7
Duzib213G1009 Durio zibethinus HOM05D003670 ORTHO05D004767 1.0e-122 444.1 382 61.5
unitig_8.g4750 Utricularia gibba HOM05D003670 ORTHO05D004767 5.0e-122 441.8 375 60.0
SEGI_21826 Sequoiadendron giganteum HOM05D003670 ORTHO05D004767 1.4e-121 440.3 320 65.6
SGA_v2.0_scaffold186G40197 Striga asiatica HOM05D003670 ORTHO05D004767 7.2e-121 438.0 304 67.1
MSTRG.7076 Avicennia marina HOM05D003670 ORTHO05D004767 1.6e-120 436.8 311 67.8
arahy.Tifrunner.gnm1.ann1.36F1KB Arachis hypogaea HOM05D003670 ORTHO05D004767 2.3e-119 433.0 353 64.0
SGA_v2.0_scaffold49G18190 Striga asiatica HOM05D003670 ORTHO05D004767 7.4e-118 427.9 338 65.1
arahy.Tifrunner.gnm1.ann1.YZ7E83 Arachis hypogaea HOM05D003670 ORTHO05D004767 1.8e-116 423.3 345 64.6
Haze_07818 Corylus avellana HOM05D003670 ORTHO05D004767 4.1e-116 422.2 303 68.3
Nitab4.5_0000388g0140 Nicotiana tabacum HOM05D003670 ORTHO05D004767 5.3e-116 421.8 323 67.8
DCAR_016837 Daucus carota HOM05D003670 ORTHO05D004767 6.7e-111 404.8 293 64.5
BcaC08g47490 Brassica carinata HOM05D003670 ORTHO05D004767 9.7e-110 401.0 379 57.5
BolC6t40330H Brassica oleracea HOM05D003670 ORTHO05D004767 3.7e-109 399.1 334 62.3
MELO3C019489.2 Cucumis melo HOM05D003670 ORTHO05D004767 4.8e-109 398.7 327 62.1
C06p53140 Brassica napus HOM05D003670 ORTHO05D004767 1.4e-108 397.1 335 62.7
Mapoly0058s0078 Marchantia polymorpha HOM05D003670 ORTHO05D004767 1.8e-108 396.7 294 62.9
Os02g0167100 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 5.3e-108 395.2 296 60.8
AagrBONN_evm.TU.Sc2ySwM_344.5346 Anthoceros agrestis HOM05D003670 ORTHO05D004767 9.1e-108 394.4 302 62.3
Dinv19592 Davidia involucrata HOM05D003670 ORTHO05D004767 2.6e-107 392.9 236 79.7
QL04p088965 Quercus lobata HOM05D003670 ORTHO05D004767 2.5e-105 386.3 241 77.2
HPP92_013209 Vanilla planifolia HOM05D003670 ORTHO05D004767 6.7e-103 378.3 364 53.6
Zm00001eb207410 Zea mays HOM05D003670 ORTHO05D004767 7.4e-102 374.8 329 55.6
Pp3c9_17670 Physcomitrium patens HOM05D003670 ORTHO05D004767 6.3e-101 371.7 303 58.7
SMO119G0061 Selaginella moellendorffii HOM05D003670 ORTHO05D004767 3.5e-99 365.9 290 59.3
Actinidia12766 Actinidia chinensis HOM05D003670 ORTHO05D004767 1.2e-91 340.9 254 68.9
CDE06G2006 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 1.7e-90 337.0 235 68.1
Rhsim05G0210500 Rhododendron simsii HOM05D003670 ORTHO05D004767 2.4e-84 316.6 229 70.3
CDE02G0962 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 1.4e-79 300.8 235 63.8
FAN16G2550 Fragaria x ananassa HOM05D003670 ORTHO05D004767 1.3e-77 294.3 196 71.9
MD05G1228700 Malus domestica HOM05D003670 ORTHO05D004767 1.8e-76 290.4 196 71.4
CBR_g17038 Chara braunii HOM05D003670 ORTHO05D004767 4.0e-71 272.7 344 42.7
Cpa.g.sc34.17 Carica papaya HOM05D003670 ORTHO05D004767 4.4e-70 269.2 216 65.7
Cre13.g607050 Chlamydomonas reinhardtii HOM05D003670 ORTHO05D004767 1.1e-68 264.6 322 44.7
MCO09G588 Micromonas commoda HOM05D003670 ORTHO05D004767 1.9e-65 253.8 298 46.3
PRCOL_00006295 Prasinoderma coloniale HOM05D003670 ORTHO05D004767 3.3e-65 253.1 293 46.4
RcHm_v2.0_Chr5g0024731 Rosa chinensis HOM05D003670 ORTHO05D004767 1.4e-60 237.7 190 64.7
A02p22680 Brassica napus HOM05D003670 ORTHO05D004767 3.5e-59 233.0 341 42.2
C02p36310 Brassica napus HOM05D003670 ORTHO05D004767 6.0e-59 232.3 203 64.5
Hma1.2p1_0269F.1_g107810 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 2.7e-51 206.8 152 69.1
Aqoxy1G03000 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 3.5e-51 206.5 122 77.9
Cfa026738 Carpinus fangiana HOM05D003670 ORTHO05D004767 3.5e-43 179.9 325 36.9
MD05G1228600 Malus domestica HOM05D003670 ORTHO05D004767 4.6e-43 179.5 181 55.2
BcaC01g00674 Brassica carinata HOM05D003670 ORTHO05D004767 2.4e-36 157.1 99 78.8
C03p82980 Brassica napus HOM05D003670 ORTHO05D004767 2.4e-36 157.1 94 81.9
BolC1t01654H Brassica oleracea HOM05D003670 ORTHO05D004767 2.1e-35 154.1 131 63.4
CAN.G891.1 Capsicum annuum HOM05D003670 ORTHO05D004767 2.1e-35 154.1 94 81.9
BcaC04g18607 Brassica carinata HOM05D003670 ORTHO05D004767 2.7e-35 153.7 99 76.8
C01p17180 Brassica napus HOM05D003670 ORTHO05D004767 1.0e-34 151.8 131 62.6
BolC9t58925H Brassica oleracea HOM05D003670 ORTHO05D004767 8.7e-34 148.7 131 61.1
Oeu010650.2 Olea europaea HOM05D003670 ORTHO05D004767 3.4e-30 136.7 97 72.2
Mapoly0032s0014 Marchantia polymorpha HOM05D003670 ORTHO05D031137 7.6e-30 135.6 322 28.9
Lsat_1_v5_gn_4_93521 Lactuca sativa HOM05D003670 ORTHO05D004767 4.9e-29 132.9 74 85.1
Cpa.g.sc34.16 Carica papaya HOM05D003670 ORTHO05D004767 1.4e-28 131.3 75 76.0
Oeu034061.1 Olea europaea HOM05D003670 ORTHO05D020012 3.5e-27 126.7 74 75.7
BcaC06g34801 Brassica carinata HOM05D003670 ORTHO05D004767 6.9e-23 112.5 99 62.6
BolC7t42971H Brassica oleracea HOM05D003670 ORTHO05D004767 2.6e-22 110.5 133 48.9
CDE06G0877 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 3.4e-22 110.2 64 76.6
Solyc06g009850.3 Solanum lycopersicum HOM05D003670 ORTHO05D014971 3.8e-21 106.7 114 54.4
BcaC03g15876 Brassica carinata HOM05D003670 ORTHO05D020012 4.3e-17 93.2 61 73.8
BcaC05g28269 Brassica carinata HOM05D003670 ORTHO05D014971 3.7e-16 90.1 110 48.2
AagrBONN_evm.TU.Sc2ySwM_117.2139 Anthoceros agrestis HOM05D003670 ORTHO05D031137 8.1e-16 89.0 232 30.6
QL04p088979 Quercus lobata HOM05D003670 ORTHO05D004767 5.8e-14 82.8 99 44.4
Sopen06g004510 Solanum pennellii HOM05D003670 ORTHO05D014971 4.9e-13 79.7 47 80.9
BcaC02g07679 Brassica carinata HOM05D003670 ORTHO05D014971 4.2e-12 76.6 41 85.4
Solyc06g009860.1 Solanum lycopersicum HOM05D003670 ORTHO05D020012 8.7e-10 68.9 44 65.9
C06p40160 Brassica napus HOM05D003670 ORTHO05D020012 2.1e-08 64.3 42 66.7
BolC6t39098H Brassica oleracea HOM05D003670 ORTHO05D020012 2.1e-08 64.3 42 66.7
Lsat_1_v5_gn_8_160501 Lactuca sativa HOM05D003670 ORTHO05D002209 3.7e-08 63.5 33 93.9


User provided reference genes

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