Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 2.2e-126 455.7 231 100.0
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 1.6e-73 280.0 183 73.2
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 3.6e-73 278.9 201 70.1
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 6.2e-65 251.5 172 66.9
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 1.8e-64 250.0 189 63.0
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 3.1e-64 249.2 182 65.9
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 5.2e-64 248.4 204 60.3
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 8.9e-64 247.7 207 60.4
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 1.5e-63 246.9 178 67.4
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 1.5e-63 246.9 177 66.7
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 4.4e-63 245.4 186 64.5
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 9.8e-63 244.2 186 64.0
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 1.3e-62 243.8 196 58.2
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 2.9e-62 242.7 184 65.2
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 2.9e-62 242.7 184 65.2
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 8.3e-62 241.1 172 66.9
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 8.3e-62 241.1 172 66.9
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 8.3e-62 241.1 193 62.7
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 1.1e-61 240.7 173 65.9
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 1.4e-61 240.4 186 63.4
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 3.2e-61 239.2 186 63.4
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 4.1e-61 238.8 177 65.0
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 5.4e-61 238.4 186 63.4
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 1.2e-60 237.3 171 64.9
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 1.2e-60 237.3 194 60.8
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 1.2e-60 237.3 190 60.0
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 1.6e-60 236.9 172 66.3
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 1.6e-60 236.9 206 57.8
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 2.7e-60 236.1 210 57.6
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 4.6e-60 235.3 192 60.4
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 4.6e-60 235.3 173 65.9
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 4.6e-60 235.3 185 60.0
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 7.8e-60 234.6 172 65.1
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 7.8e-60 234.6 186 59.7
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 7.8e-60 234.6 186 62.4
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 1.0e-59 234.2 201 55.7
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 1.3e-59 233.8 184 59.2
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 1.3e-59 233.8 186 60.2
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 2.3e-59 233.0 172 64.5
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 3.9e-59 232.3 185 62.7
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 6.6e-59 231.5 166 66.9
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 6.6e-59 231.5 189 59.8
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 6.6e-59 231.5 181 64.1
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 6.6e-59 231.5 181 61.3
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 1.1e-58 230.7 176 64.8
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 3.3e-58 229.2 169 65.1
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 4.3e-58 228.8 202 56.9
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 7.3e-58 228.0 185 61.6
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 7.3e-58 228.0 204 55.9
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 1.6e-57 226.9 173 59.5
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 2.1e-57 226.5 167 64.7
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 2.8e-57 226.1 171 62.6
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 6.2e-57 224.9 158 67.7
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 1.1e-56 224.2 194 55.7
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 1.1e-56 224.2 190 56.8
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 3.1e-56 222.6 190 56.3
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 4.0e-56 222.2 172 62.8
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 6.8e-56 221.5 229 51.1
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 8.9e-56 221.1 181 58.0
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 8.9e-56 221.1 185 57.3
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 1.2e-55 220.7 170 61.2
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 1.5e-55 220.3 190 56.3
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 2.6e-55 219.5 195 54.9
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 2.6e-55 219.5 199 56.3
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 5.8e-55 218.4 200 52.5
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 1.7e-54 216.9 165 60.6
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 2.9e-54 216.1 203 55.2
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 8.3e-54 214.5 206 53.9
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 1.1e-53 214.2 179 58.7
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 3.2e-53 212.6 171 60.8
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 3.2e-53 212.6 165 59.4
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 2.1e-52 209.9 230 49.6
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 2.1e-52 209.9 167 58.1
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 2.3e-51 206.5 223 51.1
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 2.3e-51 206.5 172 58.1
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 3.0e-51 206.1 186 53.8
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 2.5e-50 203.0 146 66.4
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 4.3e-50 202.2 145 66.9
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 9.5e-50 201.1 141 67.4
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 6.2e-49 198.4 169 58.6
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 3.8e-46 189.1 207 48.8
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 2.3e-43 179.9 191 47.6
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 3.9e-43 179.1 237 43.9
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 1.9e-42 176.8 210 46.2
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 1.2e-41 174.1 186 48.9
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 1.2e-41 174.1 181 50.3
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 2.2e-38 163.3 218 43.1
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 1.6e-36 157.1 169 50.3
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 2.1e-36 156.8 150 50.0
PGR031G0704 Punica granatum HOM05D007250 ORTHO05D009162 3.9e-35 152.5 113 61.9
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 1.9e-29 133.7 104 63.5
FAN24G3506 Fragaria x ananassa HOM05D007250 ORTHO05D009162 8.1e-25 118.2 94 57.4
MCO03G414 Micromonas commoda HOM05D007250 ORTHO05D009162 8.1e-25 118.2 200 38.0
QL03p068942 Quercus lobata HOM05D007250 ORTHO05D009162 2.4e-24 116.7 208 37.5
Sc10g0008800 Simmondsia chinensis HOM05D007250 ORTHO05D009162 4.5e-23 112.5 78 64.1
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 2.5e-21 106.7 83 56.6
Migut.M01529 Erythranthe guttata HOM05D007250 ORTHO05D009162 7.1e-21 105.1 96 52.1
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 1.6e-20 104.0 110 52.7
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 2.8e-17 93.2 136 43.4
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 6.2e-17 92.0 69 66.7
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 1.0e-11 74.7 65 56.9
Mapoly0062s0100 Marchantia polymorpha HOM05D007250 ORTHO05D009162 1.8e-11 73.9 78 44.9
QL04p088027 Quercus lobata HOM05D037085 ORTHO05D009162 2.8e-09 66.6 57 54.4
PRCOL_00005754 Prasinoderma coloniale HOM05D007250 ORTHO05D009162 3.7e-09 66.2 170 30.0


User provided reference genes

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