Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund20032 Selenicereus undatus HOM05D007136 ORTHO05D008986 1.0e-188 663.3 339 100.0
AUR62038352 Chenopodium quinoa HOM05D007136 ORTHO05D008986 7.5e-120 434.5 339 65.8
EL10Ac2g03388 Beta vulgaris HOM05D007136 ORTHO05D008986 1.5e-112 410.2 390 57.9
Ah.16g107010 Amaranthus hybridus HOM05D007136 ORTHO05D008986 1.2e-106 390.6 337 59.6
Thecc.10G044100 Theobroma cacao HOM05D007136 ORTHO05D008986 1.2e-106 390.6 345 58.6
Dinv26003 Davidia involucrata HOM05D007136 ORTHO05D008986 2.8e-106 389.4 344 58.4
GSVIVG01016535001 Vitis vinifera HOM05D007136 ORTHO05D008986 3.6e-106 389.0 343 59.5
Haze_17049 Corylus avellana HOM05D007136 ORTHO05D008986 6.8e-105 384.8 344 58.4
Cc02_g07990 Coffea canephora HOM05D007136 ORTHO05D008986 2.6e-104 382.9 342 57.0
TAR633G2090 Trochodendron aralioides HOM05D000330 ORTHO05D008986 3.8e-103 379.0 344 56.7
Hma1.2p1_0683F.1_g202870 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 6.4e-103 378.3 342 57.3
Rhsim09G0165500 Rhododendron simsii HOM05D007136 ORTHO05D008986 3.2e-102 375.9 344 56.4
Nn2g10391 Nelumbo nucifera HOM05D007136 ORTHO05D008986 3.9e-100 369.0 294 62.6
CANSAT56G3368 Cannabis sativa HOM05D007136 ORTHO05D008986 5.1e-100 368.6 343 55.4
Atru.chr12.462 Acer truncatum HOM05D007136 ORTHO05D008986 1.9e-99 366.7 344 54.9
CiPaw.01G285300 Carya illinoinensis HOM05D007136 ORTHO05D008986 4.3e-99 365.5 342 56.4
MD07G1196400 Malus domestica HOM05D007136 ORTHO05D008986 5.6e-99 365.2 344 54.9
Prupe.2G233400 Prunus persica HOM05D007136 ORTHO05D008986 1.6e-98 363.6 344 54.4
RcHm_v2.0_Chr1g0366511 Rosa chinensis HOM05D007136 ORTHO05D008986 2.8e-98 362.8 344 55.5
TWI15G0021 Tripterygium wilfordii HOM05D007136 ORTHO05D008986 2.8e-98 362.8 292 60.3
Atru.chr12.484 Acer truncatum HOM05D007136 ORTHO05D008986 4.7e-98 362.1 344 54.7
vmacro10240 Vaccinium macrocarpon HOM05D007136 ORTHO05D008986 6.2e-98 361.7 342 54.7
Ciclev10032197m.g Citrus clementina HOM05D007136 ORTHO05D008986 1.1e-97 360.9 344 54.4
Potri.010G205900 Populus trichocarpa HOM05D007136 ORTHO05D008986 9.0e-97 357.8 342 54.1
COL.COLO4_14997 Corchorus olitorius HOM05D007136 ORTHO05D008986 2.6e-96 356.3 375 52.5
Migut.F01500 Erythranthe guttata HOM05D007136 ORTHO05D008986 1.3e-95 354.0 342 52.0
Gohir.D10G226000 Gossypium hirsutum HOM05D007136 ORTHO05D008986 2.2e-95 353.2 345 52.2
Gorai.011G257200 Gossypium raimondii HOM05D007136 ORTHO05D008986 3.8e-95 352.4 345 52.2
Lj1g0011729 Lotus japonicus HOM05D007136 ORTHO05D008986 1.1e-94 350.9 342 52.6
arahy.Tifrunner.gnm1.ann1.IQ4HGL Arachis hypogaea HOM05D007136 ORTHO05D008986 1.4e-94 350.5 296 59.8
arahy.Tifrunner.gnm1.ann1.RSMT0C Arachis hypogaea HOM05D007136 ORTHO05D008986 1.4e-94 350.5 296 59.8
Gohir.A10G217300 Gossypium hirsutum HOM05D007136 ORTHO05D008986 1.4e-94 350.5 345 51.9
MSTRG.8246 Avicennia marina HOM05D007136 ORTHO05D008986 4.2e-94 349.0 342 51.8
FvH4_7g22120 Fragaria vesca HOM05D007136 ORTHO05D008986 9.3e-94 347.8 344 54.1
Ca_07254_v3 Cicer arietinum L. HOM05D007136 ORTHO05D008986 1.6e-93 347.1 294 58.8
FAN01G1850 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.6e-93 347.1 344 54.1
FAN01G1261 Fragaria x ananassa HOM05D007136 ORTHO05D008986 2.1e-93 346.7 344 53.8
FAN06G2040 Fragaria x ananassa HOM05D007136 ORTHO05D008986 2.7e-93 346.3 344 53.8
Glyma.18G289500 Glycine max HOM05D007136 ORTHO05D008986 7.8e-93 344.7 342 50.3
Psat3g181320 Pisum sativum HOM05D007136 ORTHO05D008986 7.8e-93 344.7 344 52.6
Cfa001492 Carpinus fangiana HOM05D007136 ORTHO05D008986 1.0e-92 344.4 273 63.0
Medtr7g024560 Medicago truncatula HOM05D007136 ORTHO05D008986 3.0e-92 342.8 344 52.0
Actinidia29223 Actinidia chinensis HOM05D007136 ORTHO05D008986 8.7e-92 341.3 344 52.3
FAN06G2061 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.5e-91 340.5 344 53.2
VMungo1383G1564 Vigna mungo HOM05D007136 ORTHO05D008986 4.3e-91 339.0 294 56.5
SGA_v2.0_scaffold86G26943 Striga asiatica HOM05D007136 ORTHO05D008986 9.6e-91 337.8 287 57.1
DCAR_027635 Daucus carota HOM05D007136 ORTHO05D008986 1.6e-90 337.0 342 51.5
QL08p059192 Quercus lobata HOM05D007136 ORTHO05D008986 6.2e-90 335.1 464 42.7
PGR044G0021 Punica granatum HOM05D007136 ORTHO05D008986 1.1e-89 334.3 341 50.1
Sabra10G0159100 Salix brachista HOM05D007136 ORTHO05D008986 1.1e-89 334.3 388 48.5
ClCG09G019950 Citrullus lanatus HOM05D007136 ORTHO05D008986 1.4e-89 334.0 294 56.5
Lalb_Chr10g0091721 Lupinus albus HOM05D007136 ORTHO05D008986 1.8e-89 333.6 342 50.9
Phvul.008G012700 Phaseolus vulgaris HOM05D007136 ORTHO05D008986 1.8e-89 333.6 294 56.5
FAN03G0232 Fragaria x ananassa HOM05D007136 ORTHO05D008986 2.4e-89 333.2 344 52.3
CsaV3_5G026510 Cucumis sativus L. HOM05D007136 ORTHO05D008986 6.9e-89 331.6 294 55.1
ECA238G4577 Erigeron canadensis HOM05D007136 ORTHO05D008986 2.0e-88 330.1 292 56.8
Sed0006263 Sechium edule HOM05D007136 ORTHO05D008986 3.4e-88 329.3 294 55.8
Nitab4.5_0000931g0010 Nicotiana tabacum HOM05D007136 ORTHO05D008986 1.3e-87 327.4 292 56.5
Sopen06g013560 Solanum pennellii HOM05D007136 ORTHO05D008986 1.3e-87 327.4 292 56.5
HanXRQChr14g0458151 Helianthus annuus HOM05D007136 ORTHO05D008986 2.2e-87 326.6 343 51.3
Aqoxy2G02097 Aquilegia oxysepala HOM05D007136 ORTHO05D008986 6.4e-87 325.1 293 53.9
Peaxi162Scf00658g00728 Petunia axillaris HOM05D007136 ORTHO05D008986 6.4e-87 325.1 340 51.2
SalBow6G2062 Salvia bowleyana HOM05D007136 ORTHO05D008986 6.4e-87 325.1 292 54.1
Lsat_1_v5_gn_2_119701 Lactuca sativa HOM05D007136 ORTHO05D008986 1.4e-86 323.9 339 50.7
TPR.G15525 Trifolium pratense HOM05D007136 ORTHO05D008986 1.9e-86 323.6 294 55.8
MELO3C021650.2 Cucumis melo HOM05D007136 ORTHO05D008986 3.2e-86 322.8 294 54.1
Sc09g0007080 Simmondsia chinensis HOM05D007136 ORTHO05D008986 4.6e-85 318.9 225 72.0
ATR0559G284 Amborella trichopoda HOM05D007136 ORTHO05D008986 1.3e-84 317.4 296 53.7
Nitab4.5_0000065g0080 Nicotiana tabacum HOM05D007136 ORTHO05D008986 7.4e-83 311.6 299 54.8
PSO339G3352 Papaver somniferum HOM05D007136 ORTHO05D008986 1.4e-81 307.4 289 54.0
PSO151G0201 Papaver somniferum HOM05D007136 ORTHO05D008986 1.2e-80 304.3 339 47.5
A05p43340 Brassica napus HOM05D007136 ORTHO05D008986 3.8e-79 299.3 294 50.7
BraA05t23073Z Brassica rapa HOM05D007136 ORTHO05D008986 8.4e-79 298.1 341 45.7
Sp3g03000 Schrenkiella parvula HOM05D007136 ORTHO05D008986 7.1e-78 295.0 341 46.3
THA.LOC104799346 Tarenaya hassleriana HOM05D007136 ORTHO05D008986 7.1e-78 295.0 341 46.3
HPP92_001682 Vanilla planifolia HOM05D007136 ORTHO05D008986 6.0e-77 292.0 295 51.2
Aa31LG5G14590 Aethionema arabicum HOM05D007136 ORTHO05D008986 7.9e-77 291.6 346 46.2
C05p63040 Brassica napus HOM05D007136 ORTHO05D008986 1.8e-76 290.4 341 44.9
BolC5t34957H Brassica oleracea HOM05D007136 ORTHO05D008986 1.8e-76 290.4 341 44.9
CARHR078150 Cardamine hirsuta HOM05D007136 ORTHO05D008986 8.7e-76 288.1 291 49.1
Os03g0276600 Oryza sativa ssp. japonica HOM05D007136 ORTHO05D008986 1.1e-75 287.7 293 48.8
AL3G13930 Arabidopsis lyrata HOM05D007136 ORTHO05D008986 4.3e-75 285.8 341 44.9
Carub.0003s0327 Capsella rubella HOM05D007136 ORTHO05D008986 4.3e-75 285.8 341 44.6
Hma1.2p1_0683F.1_g202860 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 4.3e-75 285.8 249 60.6
MBI05_g22899_MAGBIO Magnolia biondii HOM05D007136 ORTHO05D008986 4.8e-74 282.3 298 53.4
Thhalv10021212m.g Eutrema salsugineum HOM05D007136 ORTHO05D008986 6.9e-73 278.5 341 44.3
Manes.07G114900 Manihot esculenta HOM05D007136 ORTHO05D008986 6.9e-73 278.5 272 51.5
BcaC05g30543 Brassica carinata HOM05D007136 ORTHO05D008986 2.0e-72 276.9 330 45.2
Eucgr.J00020 Eucalyptus grandis HOM05D007136 ORTHO05D008986 4.5e-72 275.8 268 50.7
CSS0027543 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 1.9e-70 270.4 268 54.1
Cpa.g.sc1.397 Carica papaya HOM05D007136 ORTHO05D008986 3.2e-70 269.6 243 60.1
CSS0005502 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 1.2e-69 267.7 268 53.4
CDE09G1315 Ceratophyllum demersum HOM05D007136 ORTHO05D008986 2.1e-69 266.9 293 49.1
Zm00001eb012480 Zea mays HOM05D007136 ORTHO05D008986 3.7e-66 256.1 293 46.1
unitig_736.g22315 Utricularia gibba HOM05D007136 ORTHO05D008986 9.0e-65 251.5 320 45.3
Dinv31448 Davidia involucrata HOM05D007136 ORTHO05D008986 2.1e-61 240.4 228 55.3
Lj4C909G7 Lonicera japonica HOM05D007136 ORTHO05D008986 2.1e-61 240.4 221 59.3
Solyc06g043070.4 Solanum lycopersicum HOM05D007136 ORTHO05D008986 2.7e-61 240.0 238 52.9
SEGI_31981 Sequoiadendron giganteum HOM05D007136 ORTHO05D008986 1.2e-56 224.6 287 40.8
AT3G04020 Arabidopsis thaliana HOM05D007136 ORTHO05D008986 1.3e-55 221.1 240 49.2
Duzib106G1934 Durio zibethinus HOM05D007136 ORTHO05D008986 1.9e-54 217.2 211 52.6
AUR62041861 Chenopodium quinoa HOM05D007136 ORTHO05D008986 7.4e-43 178.7 113 79.6
Glyma.02G092900 Glycine max HOM05D007136 ORTHO05D008986 9.7e-43 178.3 240 41.2
Pp3c12_11030 Physcomitrium patens HOM05D007136 ORTHO05D008986 3.1e-41 173.3 292 34.6
AUR62041862 Chenopodium quinoa HOM05D007136 ORTHO05D008986 7.7e-40 168.7 150 57.3
Mapoly0002s0030 Marchantia polymorpha HOM05D007136 ORTHO05D008986 9.4e-30 135.2 280 27.1
CSS0002221 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 1.7e-18 97.8 102 50.0
CSS0010171 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 2.8e-18 97.1 102 50.0
CAN.G1401.1 Capsicum annuum HOM05D007136 ORTHO05D008986 2.3e-15 87.4 52 71.2
Solyc06g043060.1 Solanum lycopersicum HOM05D007136 ORTHO05D008986 2.3e-15 87.4 52 71.2
FAN10G3057 Fragaria x ananassa HOM05D007136 ORTHO05D025577 9.5e-14 82.0 102 40.2
SHI07863 Sapria himalayana HOM05D007136 ORTHO05D008986 1.7e-07 61.2 58 51.7


User provided reference genes

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