Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund19833 Selenicereus undatus HOM05D008505 ORTHO05D010735 2.1e-32 141.7 69 100.0
Gorai.010G129600 Gossypium raimondii HOM05D007549 ORTHO05D009532 3.1e-12 74.7 95 48.4
Medtr8g045210 Medicago truncatula HOM05D007549 ORTHO05D009532 4.6e-08 60.8 97 43.3
ATCG00630 Arabidopsis thaliana HOM05D008505 ORTHO05D010735 6.7e-07 57.0 37 78.4
CARHR282140 Cardamine hirsuta HOM05D008505 ORTHO05D010735 6.7e-07 57.0 37 78.4
PGR111G0077 Punica granatum HOM05D008505 ORTHO05D010735 6.7e-07 57.0 37 78.4
CAN.G2018.8 Capsicum annuum HOM05D008505 ORTHO05D010735 8.7e-07 56.6 37 78.4
CAN.G3365.2 Capsicum annuum HOM05D008505 ORTHO05D010735 8.7e-07 56.6 37 78.4
CAN.G35999.1 Capsicum annuum HOM05D008505 ORTHO05D010735 8.7e-07 56.6 37 78.4
CAN.G89.2 Capsicum annuum HOM05D008505 ORTHO05D010735 8.7e-07 56.6 37 78.4
DCAR_032504 Daucus carota HOM05D008505 ORTHO05D010735 8.7e-07 56.6 37 78.4
Migut.D01431 Erythranthe guttata HOM05D008505 ORTHO05D010735 8.7e-07 56.6 37 78.4
Solyc01g067760.1 Solanum lycopersicum HOM05D008505 ORTHO05D010735 8.7e-07 56.6 37 78.4
Solyc09g064400.2 Solanum lycopersicum HOM05D008505 ORTHO05D010735 8.7e-07 56.6 37 78.4
arahy.Tifrunner.gnm1.ann1.DJ5Q02 Arachis hypogaea HOM05D008505 ORTHO05D010735 1.1e-06 56.2 38 73.7
CAN.G1595.9 Capsicum annuum HOM05D008505 ORTHO05D010735 1.1e-06 56.2 37 75.7
Glyma.12G232400 Glycine max HOM05D008505 ORTHO05D010735 1.1e-06 56.2 38 73.7
Glyma.15G126100 Glycine max HOM05D008505 ORTHO05D010735 1.1e-06 56.2 38 73.7
Gorai.009G128900 Gossypium raimondii HOM05D008505 ORTHO05D010735 1.1e-06 56.2 37 75.7
Phvul.002G090522 Phaseolus vulgaris HOM05D008505 ORTHO05D010735 1.1e-06 56.2 38 73.7
Phvul.009G188366 Phaseolus vulgaris HOM05D008505 ORTHO05D010735 1.1e-06 56.2 38 73.7
Gohir.D12G108100 Gossypium hirsutum HOM05D008505 ORTHO05D010735 1.9e-06 55.5 37 75.7
BraSC103t45474Z Brassica rapa HOM05D008505 ORTHO05D010735 4.3e-06 54.3 38 73.7
CAN.G452.6 Capsicum annuum HOM05D008505 ORTHO05D010735 4.3e-06 54.3 37 75.7
Gorai.007G307300 Gossypium raimondii HOM05D008505 ORTHO05D010735 4.3e-06 54.3 37 73.0
LjContig00318g0023250 Lotus japonicus HOM05D008505 ORTHO05D010735 4.3e-06 54.3 38 71.1
PSO548G0021 Papaver somniferum HOM05D008505 ORTHO05D010735 4.3e-06 54.3 37 73.0
A06p23140 Brassica napus HOM05D008505 ORTHO05D010735 7.4e-06 53.5 37 75.7
C02p43560 Brassica napus HOM05D008505 ORTHO05D010735 7.4e-06 53.5 37 75.7
C06p22980 Brassica napus HOM05D008505 ORTHO05D010735 7.4e-06 53.5 37 75.7
BolC9t53162H Brassica oleracea HOM05D008505 ORTHO05D010735 7.4e-06 53.5 37 75.7
BolSC29t60474H Brassica oleracea HOM05D008505 ORTHO05D010735 7.4e-06 53.5 37 75.7
BolSC29t60595H Brassica oleracea HOM05D008505 ORTHO05D010735 7.4e-06 53.5 37 75.7
BolSC35t60655H Brassica oleracea HOM05D008505 ORTHO05D010735 7.4e-06 53.5 37 75.7
BolSC47t61089H Brassica oleracea HOM05D008505 ORTHO05D010735 7.4e-06 53.5 37 75.7
BraA06t25417Z Brassica rapa HOM05D008505 ORTHO05D010735 7.4e-06 53.5 37 75.7
BraSC138t45568Z Brassica rapa HOM05D008505 ORTHO05D010735 7.4e-06 53.5 37 75.7
BraSC25t45858Z Brassica rapa HOM05D008505 ORTHO05D010735 7.4e-06 53.5 37 75.7
BraSC58t46429Z Brassica rapa HOM05D008505 ORTHO05D010735 7.4e-06 53.5 37 75.7
Gohir.A12G229532 Gossypium hirsutum HOM05D008505 ORTHO05D010735 7.4e-06 53.5 37 75.7
CiPaw.11G114400 Carya illinoinensis HOM05D008505 ORTHO05D010735 9.6e-06 53.1 38 68.4


User provided reference genes

Program Settings