Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 4.5e-228 794.3 407 100.0
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 1.4e-101 374.0 443 53.7
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 5.7e-98 362.1 443 51.5
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 1.1e-72 278.1 231 64.5
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 1.4e-72 277.7 416 45.2
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 1.3e-70 271.2 309 52.1
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 1.7e-70 270.8 284 57.7
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 5.0e-70 269.2 330 51.8
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 1.1e-69 268.1 426 42.7
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 1.9e-69 267.3 330 47.3
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 7.3e-69 265.4 332 48.8
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 7.3e-69 265.4 366 47.5
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 9.5e-69 265.0 229 62.0
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 1.6e-68 264.2 266 56.4
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 4.7e-68 262.7 327 49.8
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 6.1e-68 262.3 262 58.0
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 1.0e-67 261.5 350 48.6
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 1.4e-67 261.2 320 50.0
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 1.8e-67 260.8 275 57.5
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 2.3e-67 260.4 307 51.5
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 2.3e-67 260.4 413 44.3
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 4.0e-67 259.6 381 45.4
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 4.0e-67 259.6 256 57.0
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 5.2e-67 259.2 417 44.6
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 1.2e-66 258.1 259 56.8
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 1.2e-66 258.1 264 54.2
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 1.2e-66 258.1 316 49.7
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.5e-66 257.7 414 43.2
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 1.5e-66 257.7 301 50.8
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 2.6e-66 256.9 248 57.7
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 4.4e-66 256.1 333 49.8
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 7.5e-66 255.4 411 42.3
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 9.8e-66 255.0 283 54.4
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 9.8e-66 255.0 295 51.2
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.3e-65 254.6 409 41.6
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 1.3e-65 254.6 336 48.5
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 1.7e-65 254.2 357 46.8
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 1.7e-65 254.2 330 50.9
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 2.2e-65 253.8 295 53.9
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 4.9e-65 252.7 295 51.2
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 4.9e-65 252.7 264 53.8
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 4.9e-65 252.7 327 48.6
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 6.4e-65 252.3 355 45.6
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 6.4e-65 252.3 264 53.4
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 6.4e-65 252.3 330 50.3
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 8.3e-65 251.9 295 51.2
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.1e-64 251.5 412 41.5
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 1.1e-64 251.5 243 57.6
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.9e-64 250.8 264 53.0
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 1.9e-64 250.8 252 56.7
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 2.4e-64 250.4 229 58.5
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 4.1e-64 249.6 264 53.0
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 4.1e-64 249.6 325 46.5
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 1.2e-63 248.1 336 48.8
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 1.6e-63 247.7 297 50.8
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 2.0e-63 247.3 236 58.5
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.5e-63 246.5 224 59.8
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 6.0e-63 245.7 227 59.9
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 1.7e-62 244.2 272 53.3
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 3.0e-62 243.4 295 51.2
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 1.1e-61 241.5 295 51.2
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 1.9e-61 240.7 377 42.4
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 3.3e-61 240.0 286 50.3
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 9.5e-61 238.4 352 46.3
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 9.5e-61 238.4 304 47.4
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 1.6e-60 237.7 288 49.3
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 2.3e-59 233.8 248 53.6
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 4.0e-59 233.0 268 50.7
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 1.2e-58 231.5 341 44.9
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 2.6e-58 230.3 276 51.8
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 3.7e-57 226.5 245 53.9
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 3.7e-57 226.5 192 59.9
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 1.4e-56 224.6 266 53.0
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 2.4e-56 223.8 224 52.2
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 3.5e-55 219.9 221 55.7
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 3.0e-54 216.9 304 44.1
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 3.9e-54 216.5 223 56.1
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 6.6e-54 215.7 183 62.8
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 6.6e-54 215.7 348 40.5
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 1.5e-53 214.5 188 59.6
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 9.5e-53 211.8 211 55.9
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 2.1e-52 210.7 188 58.5
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 2.1e-52 210.7 188 59.6
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 1.1e-51 208.4 188 60.6
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 2.3e-51 207.2 289 43.9
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 2.3e-51 207.2 202 55.4
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 3.1e-51 206.8 167 62.9
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 1.2e-50 204.9 249 49.0
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 1.5e-50 204.5 243 48.1
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 2.6e-50 203.8 224 50.9
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 2.6e-50 203.8 224 50.9
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 2.2e-49 200.7 224 50.4
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 1.6e-47 194.5 234 47.4
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 2.1e-47 194.1 136 71.3
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 3.5e-47 193.4 234 47.0
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 7.8e-47 192.2 232 51.3
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 3.0e-46 190.3 262 43.9
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 6.2e-44 182.6 239 41.4
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 8.9e-43 178.7 256 46.5
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 1.3e-41 174.9 168 57.1
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 7.1e-40 169.1 184 51.6
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 6.0e-39 166.0 194 52.1
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 5.1e-38 162.9 186 50.5
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 8.1e-36 155.6 157 58.6
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 7.6e-34 149.1 259 35.9
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 2.3e-30 137.5 226 42.5
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 3.9e-30 136.7 191 45.0
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.1e-29 135.2 182 48.9
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 7.3e-29 132.5 126 61.1
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 2.1e-28 131.0 181 48.1
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 2.9e-25 120.6 101 60.4
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 3.0e-22 110.5 200 42.5
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 6.7e-22 109.4 174 35.1
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 1.1e-16 92.0 206 30.1
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 1.9e-16 91.3 61 68.9
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 4.3e-13 80.1 107 43.0
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 3.7e-12 77.0 129 41.9
Cre17.g738200 Chlamydomonas reinhardtii HOM05D006410 ORTHO05D007914 1.3e-09 68.6 190 30.0
Lsat_1_v5_gn_8_97960 Lactuca sativa HOM05D006410 ORTHO05D007914 2.5e-08 64.3 56 64.3
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 3.2e-08 63.9 151 39.1
Oeu030096.1 Olea europaea HOM05D006410 ORTHO05D007914 2.7e-07 60.8 94 44.7


User provided reference genes

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