Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund19732 Selenicereus undatus HOM05D008019 ORTHO05D010184 1.2e-64 250.0 154 100.0
Ciclev10033035m.g Citrus clementina HOM05D008019 ORTHO05D010184 5.4e-41 171.4 76 94.7
Eucgr.J01265 Eucalyptus grandis HOM05D008019 ORTHO05D010184 1.3e-39 166.8 76 90.8
Nn2g15438 Nelumbo nucifera HOM05D008019 ORTHO05D010184 1.3e-39 166.8 76 93.4
Cfa010760 Carpinus fangiana HOM05D008019 ORTHO05D010184 3.0e-39 165.6 76 92.1
QL04p007219 Quercus lobata HOM05D008019 ORTHO05D010184 3.9e-39 165.2 75 92.0
Thecc.01G411900 Theobroma cacao HOM05D008019 ORTHO05D010184 3.9e-39 165.2 84 85.7
GSVIVG01032075001 Vitis vinifera HOM05D008019 ORTHO05D010184 3.9e-39 165.2 76 90.8
Dinv43452 Davidia involucrata HOM05D008019 ORTHO05D010184 6.6e-39 164.5 76 90.8
Manes.07G005100 Manihot esculenta HOM05D008019 ORTHO05D010184 6.6e-39 164.5 76 90.8
Sabra09G0046100 Salix brachista HOM05D000752 ORTHO05D000572 6.6e-39 164.5 76 89.5
Haze_03214 Corylus avellana HOM05D008019 ORTHO05D010184 1.1e-38 163.7 76 90.8
TAR623G0854 Trochodendron aralioides HOM05D008019 ORTHO05D010184 1.1e-38 163.7 76 90.8
TAR623G1004 Trochodendron aralioides HOM05D008019 ORTHO05D010184 1.5e-38 163.3 76 89.5
TWI09G1168 Tripterygium wilfordii HOM05D008019 ORTHO05D010184 2.5e-38 162.5 76 89.5
Cc02_g27810 Coffea canephora HOM05D008019 ORTHO05D010184 4.3e-38 161.8 76 86.8
Lj9A631G50 Lonicera japonica HOM05D008019 ORTHO05D010184 9.5e-38 160.6 76 88.2
Glyma.12G238000 Glycine max HOM05D008019 ORTHO05D010184 1.2e-37 160.2 76 85.5
Potri.001G268000 Populus trichocarpa HOM05D008019 ORTHO05D010184 1.2e-37 160.2 76 86.8
arahy.Tifrunner.gnm1.ann1.SF3C2I Arachis hypogaea HOM05D008019 ORTHO05D010184 1.6e-37 159.8 76 85.5
arahy.Tifrunner.gnm1.ann1.V37GBM Arachis hypogaea HOM05D008019 ORTHO05D010184 1.6e-37 159.8 76 85.5
Lj3g0025736 Lotus japonicus HOM05D008019 ORTHO05D010184 1.6e-37 159.8 76 85.5
MD02G1313500 Malus domestica HOM05D008019 ORTHO05D010184 1.6e-37 159.8 76 88.2
vmacro13657 Vaccinium macrocarpon HOM05D008019 ORTHO05D010184 1.6e-37 159.8 77 87.0
FAN01G0739 Fragaria x ananassa HOM05D008019 ORTHO05D010184 2.1e-37 159.5 80 82.5
Oeu010780.1 Olea europaea HOM05D008019 ORTHO05D010184 2.1e-37 159.5 76 86.8
Actinidia31058 Actinidia chinensis HOM05D008019 ORTHO05D010184 2.8e-37 159.1 76 86.8
COL.COLO4_23925 Corchorus olitorius HOM05D008019 ORTHO05D010184 2.8e-37 159.1 76 86.8
Aqoxy7G00800 Aquilegia oxysepala HOM05D008019 ORTHO05D010184 3.6e-37 158.7 76 88.2
FvH4_7g00910 Fragaria vesca HOM05D008019 ORTHO05D010184 4.7e-37 158.3 80 82.5
FAN06G1027 Fragaria x ananassa HOM05D008019 ORTHO05D010184 6.2e-37 157.9 80 82.5
Gohir.A12G094001 Gossypium hirsutum HOM05D008019 ORTHO05D010184 6.2e-37 157.9 84 82.1
Potri.009G062400 Populus trichocarpa HOM05D008019 ORTHO05D010184 6.2e-37 157.9 76 86.8
CSS0044570 Camellia sinensis var. sinensis HOM05D008019 ORTHO05D010184 8.1e-37 157.5 76 85.5
MSTRG.17046 Avicennia marina HOM05D008019 ORTHO05D010184 1.1e-36 157.1 76 84.2
CAN.G1155.15 Capsicum annuum HOM05D008019 ORTHO05D010184 1.1e-36 157.1 76 85.5
ECA248G1827 Erigeron canadensis HOM05D008019 ORTHO05D010184 1.1e-36 157.1 76 86.8
PGR044G0644 Punica granatum HOM05D008019 ORTHO05D010184 1.4e-36 156.8 76 84.2
RcHm_v2.0_Chr1g0315801 Rosa chinensis HOM05D008019 ORTHO05D010184 1.4e-36 156.8 76 85.5
SGA_v2.0_scaffold167G38441 Striga asiatica HOM05D008019 ORTHO05D010184 1.4e-36 156.8 84 79.8
Gorai.008G105200 Gossypium raimondii HOM05D008019 ORTHO05D010184 3.1e-36 155.6 76 85.5
Lalb_Chr19g0132131 Lupinus albus HOM05D008019 ORTHO05D010184 3.1e-36 155.6 78 82.1
MELO3C023543.2 Cucumis melo HOM05D008019 ORTHO05D010184 4.0e-36 155.2 76 82.9
CsaV3_7G031160 Cucumis sativus L. HOM05D008019 ORTHO05D010184 4.0e-36 155.2 76 82.9
MBI04_g13624_MAGBIO Magnolia biondii HOM05D008019 ORTHO05D010184 4.0e-36 155.2 76 84.2
HanXRQChr01g0016161 Helianthus annuus HOM05D008019 ORTHO05D010184 8.9e-36 154.1 76 84.2
TPR.G1886 Trifolium pratense HOM05D008019 ORTHO05D010184 8.9e-36 154.1 76 78.9
unitig_750.g28450 Utricularia gibba HOM05D008019 ORTHO05D010184 8.9e-36 154.1 76 84.2
Prupe.2G012100 Prunus persica HOM05D008019 ORTHO05D010184 1.2e-35 153.7 76 85.5
Phvul.011G212700 Phaseolus vulgaris HOM05D008019 ORTHO05D010184 2.0e-35 152.9 76 82.9
THA.LOC104819690 Tarenaya hassleriana HOM05D008019 ORTHO05D010184 2.0e-35 152.9 76 82.9
Duzib138G0215 Durio zibethinus HOM05D008019 ORTHO05D010184 2.6e-35 152.5 84 79.8
VMungo1127G0775 Vigna mungo HOM05D008019 ORTHO05D010184 2.6e-35 152.5 76 81.6
ATR0605G214 Amborella trichopoda HOM05D008019 ORTHO05D010184 3.4e-35 152.1 82 76.8
SalBow5G2002 Salvia bowleyana HOM05D008019 ORTHO05D010184 7.6e-35 151.0 84 77.4
Lsat_1_v5_gn_1_107820 Lactuca sativa HOM05D008019 ORTHO05D010184 9.9e-35 150.6 76 84.2
Rhsim07G0054900 Rhododendron simsii HOM05D008019 ORTHO05D010184 9.9e-35 150.6 76 82.9
CANSAT80G0909 Cannabis sativa HOM05D008019 ORTHO05D010184 1.7e-34 149.8 76 81.6
CDE05G1162 Ceratophyllum demersum HOM05D008019 ORTHO05D010184 1.7e-34 149.8 76 80.3
ClCG09G004230 Citrullus lanatus HOM05D008019 ORTHO05D010184 2.9e-34 149.1 76 80.3
Migut.B01317 Erythranthe guttata HOM05D008019 ORTHO05D010184 4.9e-34 148.3 76 82.9
FAN10G3815 Fragaria x ananassa HOM05D008019 ORTHO05D010184 1.9e-33 146.4 78 78.2
Os09g0485800 Oryza sativa ssp. japonica HOM05D008019 ORTHO05D010184 4.6e-32 141.7 76 77.6
SEGI_23902 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 1.3e-31 140.2 76 75.0
FAN03G3138 Fragaria x ananassa HOM05D008019 ORTHO05D010184 6.6e-31 137.9 67 82.1
Pp3c14_7420 Physcomitrium patens HOM05D008019 ORTHO05D010184 6.2e-29 131.3 76 71.1
Sed0006336 Sechium edule HOM05D008019 ORTHO05D010184 3.8e-26 122.1 76 71.1
Sc10g0000030 Simmondsia chinensis HOM05D008019 ORTHO05D010184 3.4e-19 99.0 46 93.5
SEGI_33125 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 1.2e-16 90.5 50 72.0
Zm00001eb101810 Zea mays HOM05D008019 ORTHO05D010184 2.3e-15 86.3 45 73.3
Zm00001eb101800 Zea mays HOM05D008019 ORTHO05D010184 5.1e-15 85.1 45 71.1
Gohir.D12G096933 Gossypium hirsutum HOM05D008019 ORTHO05D010184 6.0e-08 61.6 36 80.6
SEGI_37443 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 5.1e-07 58.5 38 60.5


User provided reference genes

Program Settings