Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 8.4e-191 670.2 351 100.0
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 1.2e-120 437.2 356 70.8
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 3.9e-111 405.6 356 67.1
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 1.8e-108 396.7 352 63.1
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 1.8e-108 396.7 350 65.4
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 3.1e-108 396.0 360 64.7
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 2.0e-107 393.3 354 63.3
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 1.7e-106 390.2 355 62.8
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 4.9e-106 388.7 355 63.1
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 4.9e-106 388.7 348 63.8
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 6.4e-106 388.3 351 63.0
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 2.4e-105 386.3 356 62.9
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 5.4e-105 385.2 357 61.1
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 7.1e-105 384.8 359 61.8
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 7.1e-105 384.8 351 63.5
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 1.2e-104 384.0 312 68.3
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 1.2e-104 384.0 357 61.9
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 2.1e-104 383.3 355 62.3
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 3.5e-104 382.5 354 63.6
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 3.5e-104 382.5 352 62.5
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 1.0e-103 380.9 354 61.3
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 3.9e-103 379.0 360 61.7
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 1.5e-102 377.1 354 62.1
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 1.5e-102 377.1 353 62.3
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 1.9e-102 376.7 352 61.4
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 1.9e-102 376.7 352 63.1
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 2.5e-102 376.3 354 63.0
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 5.6e-102 375.2 318 64.5
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 5.6e-102 375.2 357 61.1
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 5.6e-102 375.2 354 61.3
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 9.6e-102 374.4 353 61.5
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 9.6e-102 374.4 350 62.9
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 1.6e-101 373.6 319 66.5
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 2.1e-101 373.2 358 59.5
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 2.1e-101 373.2 312 65.7
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 2.8e-101 372.9 348 61.5
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 2.8e-101 372.9 314 67.5
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 6.2e-101 371.7 359 60.7
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 8.1e-101 371.3 351 60.7
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 1.1e-100 370.9 353 60.9
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 1.4e-100 370.5 289 70.6
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 1.8e-100 370.2 350 62.3
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 2.4e-100 369.8 353 61.2
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 4.0e-100 369.0 313 66.5
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 4.0e-100 369.0 295 69.5
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 4.0e-100 369.0 359 60.4
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 5.3e-100 368.6 353 60.9
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 5.3e-100 368.6 353 61.2
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 5.3e-100 368.6 289 70.6
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 6.9e-100 368.2 308 66.2
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 6.9e-100 368.2 353 61.5
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 9.0e-100 367.9 351 59.8
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 1.2e-99 367.5 355 60.6
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.2e-99 367.5 359 60.2
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 1.5e-99 367.1 353 61.8
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 2.0e-99 366.7 356 59.8
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 5.8e-99 365.2 352 61.9
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 7.6e-99 364.8 347 61.4
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 7.6e-99 364.8 238 79.4
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 1.3e-98 364.0 371 58.5
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 3.8e-98 362.5 340 60.0
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 8.4e-98 361.3 354 59.3
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 1.4e-97 360.5 351 59.8
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 2.4e-97 359.8 346 60.4
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 4.2e-97 359.0 278 69.8
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 9.3e-97 357.8 314 65.3
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 1.2e-96 357.5 288 68.4
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 1.2e-96 357.5 357 57.7
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 2.1e-96 356.7 367 57.8
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 1.3e-95 354.0 288 68.1
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 1.7e-95 353.6 307 64.2
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 3.0e-95 352.8 354 59.3
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 3.0e-95 352.8 354 58.2
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 3.9e-95 352.4 288 68.1
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 5.1e-95 352.1 307 64.8
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 1.1e-94 350.9 238 73.9
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 2.5e-94 349.7 279 69.5
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 4.3e-94 349.0 335 59.7
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 1.3e-93 347.4 352 60.2
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 2.1e-93 346.7 313 63.9
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 2.1e-93 346.7 294 67.7
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 4.0e-92 342.4 313 62.3
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 1.2e-91 340.9 395 53.9
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 4.5e-91 339.0 353 58.6
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 4.9e-90 335.5 356 57.3
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 8.4e-90 334.7 290 62.8
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 4.2e-89 332.4 350 56.0
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 7.1e-89 331.6 321 60.4
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 2.1e-88 330.1 221 75.6
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 1.8e-87 327.0 235 71.9
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 2.6e-83 313.2 317 56.2
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 5.8e-83 312.0 279 62.0
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 1.3e-82 310.8 352 53.4
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 3.2e-73 279.6 216 64.8
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 2.1e-72 276.9 346 46.2
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 3.5e-72 276.2 259 62.2
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 3.3e-70 269.6 280 56.4
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 8.2e-69 265.0 240 63.3
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 2.0e-67 260.4 289 49.1
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 4.5e-67 259.2 255 60.0
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 3.8e-66 256.1 312 47.1
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 6.5e-66 255.4 226 64.6
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 4.3e-62 242.7 292 47.9
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 5.3e-60 235.7 292 53.1
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 6.9e-60 235.3 280 49.3
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.4e-57 227.6 282 48.2
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 5.5e-57 225.7 245 53.5
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 6.7e-55 218.8 282 46.1
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 2.4e-44 183.7 286 39.9
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 5.3e-44 182.6 129 74.4
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 2.0e-43 180.6 236 46.2
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 2.2e-37 160.6 125 65.6
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 4.5e-35 152.9 196 51.5
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 2.9e-34 150.2 240 37.5
Oeu030719.1 Olea europaea HOM05D005944 ORTHO05D007188 2.1e-24 117.5 330 34.2
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 1.5e-22 111.3 237 32.1
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 6.6e-18 95.9 253 29.2
Hund03397 Selenicereus undatus HOM05D006532 ORTHO05D381031 8.1e-08 62.4 32 100.0
Sc11g0003830 Simmondsia chinensis HOM05D006532 ORTHO05D387458 1.5e-06 58.2 52 55.8


User provided reference genes

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