Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 9.8e-75 283.5 155 100.0
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 5.1e-47 191.4 122 86.9
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 2.1e-45 186.0 122 83.6
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 1.4e-44 183.3 122 82.8
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 1.4e-44 183.3 122 83.6
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 1.4e-44 183.3 122 83.6
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 3.1e-44 182.2 120 84.2
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 9.0e-44 180.6 122 82.8
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.2e-43 180.3 120 84.2
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 2.6e-43 179.1 122 82.8
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 3.4e-43 178.7 122 81.1
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 3.4e-43 178.7 117 85.5
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 5.8e-43 177.9 122 81.1
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 7.6e-43 177.6 122 80.3
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 7.6e-43 177.6 120 80.8
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 9.9e-43 177.2 120 82.5
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 9.9e-43 177.2 120 81.7
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 1.3e-42 176.8 121 81.8
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 1.3e-42 176.8 122 82.0
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 1.3e-42 176.8 122 82.0
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 1.3e-42 176.8 122 80.3
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 1.7e-42 176.4 122 79.5
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 1.7e-42 176.4 122 80.3
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 2.2e-42 176.0 120 80.0
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 2.2e-42 176.0 122 79.5
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 2.9e-42 175.6 136 74.3
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 6.4e-42 174.5 120 80.8
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 6.4e-42 174.5 120 80.8
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 8.4e-42 174.1 122 78.7
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 8.4e-42 174.1 119 79.8
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 8.4e-42 174.1 118 81.4
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 8.4e-42 174.1 118 81.4
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 1.4e-41 173.3 120 79.2
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 1.4e-41 173.3 122 80.3
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 1.4e-41 173.3 120 80.8
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 1.9e-41 172.9 120 80.0
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 1.9e-41 172.9 122 79.5
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 1.9e-41 172.9 120 79.2
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 2.4e-41 172.6 122 79.5
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 3.2e-41 172.2 120 80.0
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 4.2e-41 171.8 122 78.7
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 5.4e-41 171.4 122 79.5
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 5.4e-41 171.4 122 74.6
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 7.1e-41 171.0 122 77.0
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 7.1e-41 171.0 115 79.1
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 9.3e-41 170.6 122 77.0
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 9.3e-41 170.6 118 79.7
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 1.2e-40 170.2 120 78.3
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 1.2e-40 170.2 120 78.3
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 2.1e-40 169.5 126 77.8
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 2.1e-40 169.5 120 78.3
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 2.7e-40 169.1 120 76.7
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 2.7e-40 169.1 122 76.2
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 3.5e-40 168.7 122 77.0
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 3.5e-40 168.7 115 77.4
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 3.5e-40 168.7 122 76.2
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 3.5e-40 168.7 122 75.4
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 4.6e-40 168.3 124 75.0
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 4.6e-40 168.3 114 80.7
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 6.0e-40 167.9 119 77.3
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 6.0e-40 167.9 117 79.5
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 1.0e-39 167.2 120 75.8
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 1.3e-39 166.8 119 75.6
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 1.7e-39 166.4 118 78.0
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 3.0e-39 165.6 120 76.7
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 5.1e-39 164.9 120 75.8
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 8.7e-39 164.1 120 73.3
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 1.5e-38 163.3 120 74.2
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 1.9e-38 162.9 112 81.2
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 1.9e-38 162.9 122 73.0
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 2.5e-38 162.5 120 73.3
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 3.3e-38 162.2 120 72.5
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 3.3e-38 162.2 120 72.5
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 3.3e-38 162.2 122 72.1
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 5.6e-38 161.4 120 72.5
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 5.6e-38 161.4 117 76.1
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 7.3e-38 161.0 122 71.3
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 9.6e-38 160.6 122 71.3
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 9.6e-38 160.6 120 71.7
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 1.3e-37 160.2 115 73.9
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 1.3e-37 160.2 122 71.3
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 2.1e-37 159.5 115 73.0
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 2.1e-37 159.5 115 73.0
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 4.8e-37 158.3 122 73.0
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 4.8e-37 158.3 122 73.0
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 4.8e-37 158.3 119 72.3
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 6.9e-36 154.5 110 78.2
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 2.0e-35 152.9 128 66.4
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 3.4e-35 152.1 119 72.3
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 5.8e-35 151.4 113 75.2
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 7.6e-35 151.0 116 75.9
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 1.7e-34 149.8 110 76.4
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 1.7e-34 149.8 103 81.6
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 6.4e-34 147.9 163 55.2
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 1.9e-33 146.4 202 49.5
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 1.6e-32 143.3 96 80.2
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 1.1e-30 137.1 121 61.2
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 1.9e-30 136.3 103 70.9
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 2.5e-30 136.0 108 70.4
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 4.8e-29 131.7 121 57.9
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 6.2e-29 131.3 98 72.4
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 5.8e-27 124.8 96 75.0
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 8.4e-26 120.9 119 55.5
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 1.9e-25 119.8 88 75.0
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 2.3e-23 112.8 84 77.4
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 5.1e-23 111.7 81 72.8
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 9.6e-22 107.5 79 73.4
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 3.1e-20 102.4 99 51.5
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 3.1e-20 102.4 100 61.0
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 6.9e-20 101.3 84 69.0
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 2.0e-19 99.8 85 67.1
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 5.5e-17 91.7 65 72.3
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 9.3e-17 90.9 65 72.3
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 2.7e-16 89.4 66 78.8
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 1.0e-15 87.4 57 84.2
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 3.9e-15 85.5 64 71.9
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 1.6e-13 80.1 53 73.6
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 3.7e-13 79.0 57 70.2
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 4.1e-12 75.5 73 60.3
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 6.9e-12 74.7 53 69.8
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 2.0e-11 73.2 52 71.2
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 4.6e-08 62.0 56 66.1
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 7.9e-08 61.2 42 71.4
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 1.8e-07 60.1 118 31.4
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 8.8e-07 57.8 61 49.2
MCO11G208 Micromonas commoda HOM05D006291 ORTHO05D007669 1.1e-06 57.4 115 32.2


User provided reference genes

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