Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund19333 Selenicereus undatus HOM05D004699 ORTHO05D005668 2.1e-211 738.8 378 100.0
AUR62043639 Chenopodium quinoa HOM05D004699 ORTHO05D005668 2.2e-120 436.4 368 63.3
Sc09g0006780 Simmondsia chinensis HOM05D004699 ORTHO05D005668 6.4e-120 434.9 377 62.3
Ah.10g033030 Amaranthus hybridus HOM05D004699 ORTHO05D005668 2.7e-118 429.5 374 61.0
AUR62020788 Chenopodium quinoa HOM05D004699 ORTHO05D005668 7.9e-118 427.9 371 62.8
Dinv11807 Davidia involucrata HOM05D004699 ORTHO05D005668 3.9e-117 425.6 378 60.8
CiPaw.15G145000 Carya illinoinensis HOM05D004699 ORTHO05D005668 5.1e-117 425.2 374 58.8
TAR633G1364 Trochodendron aralioides HOM05D004699 ORTHO05D005668 9.6e-116 421.0 374 59.4
Haze_18894 Corylus avellana HOM05D004699 ORTHO05D005668 1.6e-115 420.2 369 59.6
Cc03_g16280 Coffea canephora HOM05D004699 ORTHO05D005668 2.4e-114 416.4 376 59.8
Nn2g10994 Nelumbo nucifera HOM05D004699 ORTHO05D005668 1.5e-113 413.7 377 57.8
QL08p056836 Quercus lobata HOM05D004699 ORTHO05D005668 4.5e-113 412.1 374 57.2
PGSC0003DMG400007657 Solanum tuberosum HOM05D004699 ORTHO05D005668 5.8e-113 411.8 378 58.5
Gohir.D13G022200 Gossypium hirsutum HOM05D004699 ORTHO05D005668 7.6e-113 411.4 372 58.6
PGR142G2805 Punica granatum HOM05D004699 ORTHO05D005668 7.6e-113 411.4 379 58.6
Thecc.10G067900 Theobroma cacao HOM05D004699 ORTHO05D005668 7.6e-113 411.4 372 58.6
Ciclev10032131m.g Citrus clementina HOM05D004699 ORTHO05D005668 2.2e-112 409.8 372 57.5
Gorai.013G025000 Gossypium raimondii HOM05D004699 ORTHO05D005668 2.2e-112 409.8 370 58.6
Actinidia03029 Actinidia chinensis HOM05D004699 ORTHO05D005668 2.9e-112 409.5 380 57.1
CAN.G50.13 Capsicum annuum HOM05D004699 ORTHO05D005668 1.4e-111 407.1 374 58.0
Solyc08g015990.4 Solanum lycopersicum HOM05D004699 ORTHO05D005668 1.4e-111 407.1 378 56.9
Cpa.g.sc53.21 Carica papaya HOM05D004699 ORTHO05D005668 1.9e-111 406.8 375 58.1
Gohir.A13G021600 Gossypium hirsutum HOM05D004699 ORTHO05D005668 1.9e-111 406.8 372 58.1
Duzib114G0670 Durio zibethinus HOM05D004699 ORTHO05D005668 2.4e-111 406.4 372 57.8
Nitab4.5_0001070g0040 Nicotiana tabacum HOM05D004699 ORTHO05D005668 2.1e-110 403.3 378 57.9
Lj5g0001210 Lotus japonicus HOM05D004699 ORTHO05D005668 3.5e-110 402.5 376 57.7
Sopen08g006240 Solanum pennellii HOM05D004699 ORTHO05D005668 7.9e-110 401.4 378 56.3
Lalb_Chr01g0010171 Lupinus albus HOM05D004699 ORTHO05D005668 1.0e-109 401.0 380 56.6
Aqoxy2G00791 Aquilegia oxysepala HOM05D004699 ORTHO05D005668 3.0e-109 399.4 376 55.9
CSS0042102 Camellia sinensis var. sinensis HOM05D004699 ORTHO05D005668 1.9e-108 396.7 382 57.1
CANSAT56G2462 Cannabis sativa HOM05D004699 ORTHO05D005668 1.9e-108 396.7 376 56.9
Actinidia38250 Actinidia chinensis HOM05D004699 ORTHO05D005668 4.3e-108 395.6 372 56.2
ClCG06G002910 Citrullus lanatus HOM05D004699 ORTHO05D005668 9.6e-108 394.4 371 55.8
Prupe.2G218300 Prunus persica HOM05D004699 ORTHO05D005668 9.6e-108 394.4 376 57.4
arahy.Tifrunner.gnm1.ann1.3U687E Arachis hypogaea HOM05D004699 ORTHO05D005668 1.3e-107 394.0 376 57.2
arahy.Tifrunner.gnm1.ann1.TH86UG Arachis hypogaea HOM05D004699 ORTHO05D005668 4.8e-107 392.1 376 56.9
Glyma.20G177500 Glycine max HOM05D004699 ORTHO05D005668 4.8e-107 392.1 376 56.1
MD07G1179200 Malus domestica HOM05D004699 ORTHO05D005668 4.8e-107 392.1 376 56.6
CSS0050516 Camellia sinensis var. sinensis HOM05D004699 ORTHO05D005668 6.2e-107 391.7 380 57.4
Nitab4.5_0000348g0090 Nicotiana tabacum HOM05D004699 ORTHO05D005668 1.1e-106 391.0 379 55.9
Eucgr.G02801 Eucalyptus grandis HOM05D004699 ORTHO05D005668 2.4e-106 389.8 375 56.0
CsaV3_6G009040 Cucumis sativus L. HOM05D004699 ORTHO05D005668 4.0e-106 389.0 372 55.4
MSTRG.6667 Avicennia marina HOM05D004699 ORTHO05D005668 6.9e-106 388.3 376 55.1
Medtr1g095910 Medicago truncatula HOM05D004699 ORTHO05D005668 6.9e-106 388.3 376 56.1
Potri.008G044100 Populus trichocarpa HOM05D004699 ORTHO05D005668 9.0e-106 387.9 374 55.9
MELO3C022239.2 Cucumis melo HOM05D004699 ORTHO05D005668 1.5e-105 387.1 372 55.1
Ca_10595_v3 Cicer arietinum L. HOM05D004699 ORTHO05D005668 3.4e-105 386.0 375 56.5
Atru.chr12.635 Acer truncatum HOM05D004699 ORTHO05D005668 5.8e-105 385.2 369 54.5
Potri.010G217400 Populus trichocarpa HOM05D004699 ORTHO05D005668 2.9e-104 382.9 372 55.6
Phvul.007G091600 Phaseolus vulgaris HOM05D004699 ORTHO05D005668 3.8e-104 382.5 376 54.0
Psat6g186040 Pisum sativum HOM05D004699 ORTHO05D005668 4.9e-104 382.1 376 55.1
Sed0011372 Sechium edule HOM05D004699 ORTHO05D005668 4.9e-104 382.1 370 54.3
Nitab4.5_0005353g0020 Nicotiana tabacum HOM05D004699 ORTHO05D005668 6.5e-104 381.7 372 56.5
Manes.07G102100 Manihot esculenta HOM05D004699 ORTHO05D005668 8.4e-104 381.3 376 54.5
Glyma.10G214100 Glycine max HOM05D004699 ORTHO05D005668 1.4e-103 380.6 376 54.5
MD01G1131100 Malus domestica HOM05D004699 ORTHO05D005668 1.9e-103 380.2 376 55.3
VMungo0720G0718 Vigna mungo HOM05D004699 ORTHO05D005668 1.9e-103 380.2 371 54.7
Migut.M00004 Erythranthe guttata HOM05D004699 ORTHO05D005668 4.2e-103 379.0 376 54.0
Nitab4.5_0000219g0050 Nicotiana tabacum HOM05D004699 ORTHO05D005668 7.1e-103 378.3 372 56.2
Sabra10G0168100 Salix brachista HOM05D004699 ORTHO05D005668 9.3e-103 377.9 372 55.4
Solyc12g017820.2 Solanum lycopersicum HOM05D004699 ORTHO05D005668 9.3e-103 377.9 378 55.6
FAN10G1203 Fragaria x ananassa HOM05D004699 ORTHO05D005668 1.2e-102 377.5 379 54.9
CAN.G8.39 Capsicum annuum HOM05D004699 ORTHO05D005668 1.6e-102 377.1 375 55.7
Gorai.012G093600 Gossypium raimondii HOM05D004699 ORTHO05D005668 1.6e-102 377.1 372 54.6
FvH4_7g20140 Fragaria vesca HOM05D004699 ORTHO05D005668 2.1e-102 376.7 379 54.6
FAN06G0847 Fragaria x ananassa HOM05D004699 ORTHO05D005668 2.1e-102 376.7 379 54.6
RcHm_v2.0_Chr1g0364111 Rosa chinensis HOM05D004699 ORTHO05D005668 2.1e-102 376.7 378 54.5
PGSC0003DMG400002241 Solanum tuberosum HOM05D004699 ORTHO05D005668 2.7e-102 376.3 378 55.3
DCAR_006464 Daucus carota HOM05D004699 ORTHO05D005668 1.5e-100 370.5 374 53.7
Lalb_Chr21g0305871 Lupinus albus HOM05D004699 ORTHO05D005668 3.3e-100 369.4 372 54.0
Sabra08G0030500 Salix brachista HOM05D004699 ORTHO05D005668 3.3e-100 369.4 399 51.6
Gohir.A05G344400 Gossypium hirsutum HOM05D004699 ORTHO05D005668 1.3e-99 367.5 372 53.0
Sopen12g008620 Solanum pennellii HOM05D004699 ORTHO05D005668 2.8e-99 366.3 378 54.2
arahy.Tifrunner.gnm1.ann1.32M4WS Arachis hypogaea HOM05D004699 ORTHO05D005668 4.8e-99 365.5 361 55.1
TWI63G1195 Tripterygium wilfordii HOM05D004699 ORTHO05D005668 4.8e-99 365.5 372 54.3
Peaxi162Scf00057g00154 Petunia axillaris HOM05D004699 ORTHO05D005668 2.4e-98 363.2 376 54.8
THA.LOC104799349 Tarenaya hassleriana HOM05D004699 ORTHO05D005668 4.1e-98 362.5 376 53.7
HanXRQChr07g0195941 Helianthus annuus HOM05D004699 ORTHO05D005668 5.3e-98 362.1 372 52.4
PSO349G0185 Papaver somniferum HOM05D004699 ORTHO05D005668 3.4e-97 359.4 376 52.9
PSO765G0019 Papaver somniferum HOM05D004699 ORTHO05D005668 4.5e-97 359.0 376 52.7
ECA247G2135 Erigeron canadensis HOM05D004699 ORTHO05D005668 5.9e-97 358.6 371 52.6
HanXRQChr14g0453411 Helianthus annuus HOM05D004699 ORTHO05D005668 2.5e-95 353.2 373 51.5
vmacro07089 Vaccinium macrocarpon HOM05D004699 ORTHO05D005668 5.5e-95 352.1 445 49.9
ATR0661G308 Amborella trichopoda HOM05D004699 ORTHO05D005668 7.2e-95 351.7 359 52.6
SalBow8G2974 Salvia bowleyana HOM05D004699 ORTHO05D005668 1.6e-94 350.5 377 50.9
AT5G63220 Arabidopsis thaliana HOM05D004699 ORTHO05D005668 2.7e-94 349.7 375 51.2
Peaxi162Scf01205g00165 Petunia axillaris HOM05D004699 ORTHO05D005668 4.6e-94 349.0 379 52.2
A06p29940 Brassica napus HOM05D004699 ORTHO05D005668 1.3e-93 347.4 373 50.9
AL8G40300 Arabidopsis lyrata HOM05D004699 ORTHO05D005668 2.3e-93 346.7 375 50.7
BcaC01g02566 Brassica carinata HOM05D004699 ORTHO05D005668 3.0e-93 346.3 375 50.4
CDE04G1653 Ceratophyllum demersum HOM05D004699 ORTHO05D005668 3.0e-93 346.3 355 51.0
Duzib106G1564 Durio zibethinus HOM05D004699 ORTHO05D005668 3.0e-93 346.3 370 53.0
TAR636G2780 Trochodendron aralioides HOM05D004699 ORTHO05D005668 3.0e-93 346.3 328 56.4
Aa31LG1G18760 Aethionema arabicum HOM05D004699 ORTHO05D005668 3.9e-93 345.9 375 50.7
CARHR277070 Cardamine hirsuta HOM05D004699 ORTHO05D005668 5.1e-93 345.5 375 49.9
BolC3t18594H Brassica oleracea HOM05D004699 ORTHO05D005668 1.1e-92 344.4 373 50.4
Carub.0008s2397 Capsella rubella HOM05D004699 ORTHO05D005668 1.9e-92 343.6 375 50.1
THA.LOC104827325 Tarenaya hassleriana HOM05D004699 ORTHO05D005668 4.3e-92 342.4 375 50.7
Thhalv10004594m.g Eutrema salsugineum HOM05D004699 ORTHO05D005668 7.4e-92 341.7 375 49.1
HPP92_021827 Vanilla planifolia HOM05D004699 ORTHO05D005668 3.1e-90 336.3 374 50.5
Oeu061895.3 Olea europaea HOM05D004699 ORTHO05D005668 1.2e-89 334.3 364 51.9
Sp2g26340 Schrenkiella parvula HOM05D004699 ORTHO05D005668 2.0e-89 333.6 375 48.8
Cfa019630 Carpinus fangiana HOM05D004699 ORTHO05D005668 1.0e-88 331.3 315 57.1
BolC9t53837H Brassica oleracea HOM05D004699 ORTHO05D005668 2.2e-88 330.1 373 48.8
BraA09t36470Z Brassica rapa HOM05D004699 ORTHO05D005668 3.8e-88 329.3 373 49.1
C09p09240 Brassica napus HOM05D004699 ORTHO05D005668 4.2e-87 325.9 373 48.5
A09p08190 Brassica napus HOM05D004699 ORTHO05D005668 1.6e-86 323.9 374 48.7
GSVIVG01016338001 Vitis vinifera HOM05D004699 ORTHO05D005668 2.6e-84 316.6 686 34.3
FAN01G1284 Fragaria x ananassa HOM05D004699 ORTHO05D005668 4.4e-84 315.8 372 48.9
Lsat_1_v5_gn_2_110160 Lactuca sativa HOM05D004699 ORTHO05D005668 3.1e-82 309.7 345 50.4
CDE07G1914 Ceratophyllum demersum HOM05D004699 ORTHO05D005668 2.0e-81 307.0 338 49.4
Gohir.D04G082900 Gossypium hirsutum HOM05D004699 ORTHO05D005668 3.8e-80 302.8 372 47.6
FAN03G0794 Fragaria x ananassa HOM05D004699 ORTHO05D005668 1.9e-79 300.4 375 47.5
C03p63420 Brassica napus HOM05D004699 ORTHO05D005668 7.2e-79 298.5 373 45.6
SGA_v2.0_scaffold277G46671 Striga asiatica HOM05D004699 ORTHO05D000105 4.7e-78 295.8 545 38.7
BraA06t25945Z Brassica rapa HOM05D004699 ORTHO05D005668 1.0e-77 294.7 374 46.0
Dinv31344 Davidia involucrata HOM05D004699 ORTHO05D005668 3.0e-77 293.1 313 52.7
arahy.Tifrunner.gnm1.ann1.UD3ZER Arachis hypogaea HOM05D004699 ORTHO05D005668 1.7e-75 287.3 341 49.0
Hund22480 Selenicereus undatus HOM05D004699 ORTHO05D005668 5.3e-74 282.3 306 52.9
CDE07G0668 Ceratophyllum demersum HOM05D004699 ORTHO05D005668 1.1e-71 274.6 374 44.1
arahy.Tifrunner.gnm1.ann1.I3EVQT Arachis hypogaea HOM05D004699 ORTHO05D005668 7.2e-71 271.9 314 47.8
Mapoly0019s0063 Marchantia polymorpha HOM05D004699 ORTHO05D005668 5.2e-69 265.8 359 42.9
Pp3c7_7450 Physcomitrium patens HOM05D004699 ORTHO05D005668 4.4e-68 262.7 360 41.7
Zm00001eb123410 Zea mays HOM05D004699 ORTHO05D005668 1.4e-66 257.7 320 47.5
Pp3c11_21230 Physcomitrium patens HOM05D004699 ORTHO05D005668 1.8e-66 257.3 366 41.0
Rhsim03G0122800 Rhododendron simsii HOM05D004699 ORTHO05D005668 5.9e-65 252.3 179 69.8
TPR.G1830 Trifolium pratense HOM05D004699 ORTHO05D005668 2.5e-63 246.9 253 54.2
Lj8C95T3 Lonicera japonica HOM05D004699 ORTHO05D005668 2.0e-60 237.3 285 46.3
SMO116G0436 Selaginella moellendorffii HOM05D004699 ORTHO05D005668 1.8e-58 230.7 356 39.3
CSS0008535 Camellia sinensis var. sinensis HOM05D004699 ORTHO05D005668 5.0e-56 222.6 254 50.4
Zm00001eb336250 Zea mays HOM05D004699 ORTHO05D005668 1.6e-46 191.0 271 42.1
CBR_g49532 Chara braunii HOM05D004699 ORTHO05D005668 3.0e-40 170.2 355 31.3
Dinv04679 Davidia involucrata HOM05D004699 ORTHO05D005668 1.1e-37 161.8 96 82.3
AagrBONN_evm.TU.Sc2ySwM_344.3470 Anthoceros agrestis HOM05D004699 ORTHO05D005668 3.1e-37 160.2 167 47.3
RcHm_v2.0_Chr5g0038701 Rosa chinensis HOM05D004699 ORTHO05D005668 3.9e-32 143.3 99 70.7
Hma1.2p1_0904F.1_g235250 Hydrangea macrophylla HOM05D004699 ORTHO05D005668 2.3e-29 134.0 86 76.7
RcHm_v2.0_Chr2g0153331 Rosa chinensis HOM05D004699 ORTHO05D005668 4.4e-28 129.8 99 66.7
CAN.G95.7 Capsicum annuum HOM05D004699 ORTHO05D005668 3.6e-22 110.2 88 63.6
Gohir.D05G316201 Gossypium hirsutum HOM05D004699 ORTHO05D005668 9.9e-20 102.1 82 58.5
Gorai.009G338200 Gossypium raimondii HOM05D004699 ORTHO05D005668 2.2e-19 100.9 82 58.5
Oeu050294.2 Olea europaea HOM05D004699 ORTHO05D005668 6.0e-17 92.8 100 53.0
SEGI_20090 Sequoiadendron giganteum HOM05D004699 ORTHO05D005668 2.3e-16 90.9 99 47.5
Os01g0164700 Oryza sativa ssp. japonica HOM05D004699 ORTHO05D005668 5.6e-15 86.3 63 66.7
Cre06.g282950 Chlamydomonas reinhardtii HOM05D004699 ORTHO05D005668 3.4e-12 77.0 379 21.6
CANSAT56G0634 Cannabis sativa HOM05D004699 ORTHO05D033952 3.8e-11 73.6 54 68.5
CANSAT56G3585 Cannabis sativa HOM05D004699 ORTHO05D033952 3.8e-11 73.6 54 68.5
CANSAT56G0323 Cannabis sativa HOM05D004699 ORTHO05D033952 4.9e-11 73.2 54 68.5
Gohir.A02G086400 Gossypium hirsutum HOM05D004699 ORTHO05D005668 2.4e-10 70.9 43 81.4
SEGI_31020 Sequoiadendron giganteum HOM05D004699 ORTHO05D005668 5.4e-10 69.7 56 57.1
CsaV3_6G007970 Cucumis sativus L. HOM05D008150 ORTHO05D010312 3.5e-09 67.0 76 51.3
Hma1.2p1_0904F.1_g235240 Hydrangea macrophylla HOM05D004699 ORTHO05D005668 1.6e-06 58.2 107 34.6


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