Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund19231 Selenicereus undatus HOM05D003715 ORTHO05D003958 3.8e-151 538.1 269 100.0
EL10Ac3g06828 Beta vulgaris HOM05D003715 ORTHO05D003958 6.5e-66 255.0 283 53.4
Sc13g0002630 Simmondsia chinensis HOM05D003715 ORTHO05D003958 2.6e-62 243.0 294 48.6
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 1.5e-54 217.2 236 55.9
Manes.08G145000 Manihot esculenta HOM05D003715 ORTHO05D003958 3.5e-51 206.1 289 45.0
Potri.019G035600 Populus trichocarpa HOM05D003715 ORTHO05D003958 1.0e-50 204.5 309 42.1
QL07p018445 Quercus lobata HOM05D003715 ORTHO05D003958 5.0e-50 202.2 302 41.4
Manes.09G140500 Manihot esculenta HOM05D003715 ORTHO05D003958 6.5e-50 201.8 287 43.9
Actinidia22080 Actinidia chinensis HOM05D003715 ORTHO05D003958 8.5e-50 201.4 313 41.9
Hma1.2p1_0152F.1_g067600 Hydrangea macrophylla HOM05D003715 ORTHO05D003958 2.5e-49 199.9 290 43.8
CiPaw.10G001300 Carya illinoinensis HOM05D003715 ORTHO05D003958 7.2e-49 198.4 307 40.7
Haze_19430 Corylus avellana HOM05D003715 ORTHO05D003958 3.6e-48 196.1 311 40.8
PSO339G5928 Papaver somniferum HOM05D003715 ORTHO05D003958 3.6e-48 196.1 294 43.2
TAR623G0055 Trochodendron aralioides HOM05D003715 ORTHO05D003958 1.4e-47 194.1 302 41.7
Eucgr.A02102 Eucalyptus grandis HOM05D003715 ORTHO05D003958 3.0e-47 193.0 304 43.4
TWI34G1349 Tripterygium wilfordii HOM05D003715 ORTHO05D003958 5.2e-47 192.2 302 41.4
Sabra19G0044200 Salix brachista HOM05D003715 ORTHO05D003958 8.8e-47 191.4 305 40.7
Sabra19G0047500 Salix brachista HOM05D003715 ORTHO05D003958 8.8e-47 191.4 305 40.7
PSO384G3755 Papaver somniferum HOM05D003715 ORTHO05D003958 1.2e-46 191.0 291 43.0
Cfa001533 Carpinus fangiana HOM05D003715 ORTHO05D003958 2.6e-46 189.9 307 39.4
Potri.013G057200 Populus trichocarpa HOM05D003715 ORTHO05D003958 4.4e-46 189.1 308 39.9
Dinv14575 Davidia involucrata HOM05D003715 ORTHO05D003958 5.7e-46 188.7 296 41.6
vmacro12564 Vaccinium macrocarpon HOM05D003715 ORTHO05D003958 6.3e-45 185.3 296 43.9
Gorai.007G262000 Gossypium raimondii HOM05D003715 ORTHO05D003958 1.8e-44 183.7 291 41.9
PGR142G1981 Punica granatum HOM05D003715 ORTHO05D003958 3.1e-44 183.0 294 42.5
Oeu024502.1 Olea europaea HOM05D003715 ORTHO05D003958 4.1e-44 182.6 299 40.8
Actinidia30549 Actinidia chinensis HOM05D003715 ORTHO05D003958 7.0e-44 181.8 246 47.2
MELO3C008806.2 Cucumis melo HOM05D003715 ORTHO05D003958 7.0e-44 181.8 301 42.2
ClCG04G005350 Citrullus lanatus HOM05D003715 ORTHO05D003958 2.0e-43 180.3 295 39.0
CsaV3_4G013240 Cucumis sativus L. HOM05D003715 ORTHO05D003958 2.7e-43 179.9 309 39.5
Oeu035703.1 Olea europaea HOM05D003715 ORTHO05D003958 2.7e-43 179.9 286 42.3
Dinv37021 Davidia involucrata HOM05D003715 ORTHO05D003958 3.5e-43 179.5 295 42.0
TWI32G0411 Tripterygium wilfordii HOM05D003715 ORTHO05D003958 4.5e-43 179.1 292 40.1
AUR62032043 Chenopodium quinoa HOM05D003715 ORTHO05D003958 1.0e-42 177.9 272 43.4
Duzib106G1922 Durio zibethinus HOM05D003715 ORTHO05D003958 1.7e-42 177.2 293 40.6
Peaxi162Scf00463g00019 Petunia axillaris HOM05D003715 ORTHO05D003958 1.7e-42 177.2 301 38.2
Sabra13G0051000 Salix brachista HOM05D003715 ORTHO05D003958 2.2e-42 176.8 307 38.1
Gohir.A11G235300 Gossypium hirsutum HOM05D003715 ORTHO05D003958 2.9e-42 176.4 291 41.2
PGR042G0616 Punica granatum HOM05D003715 ORTHO05D003958 2.9e-42 176.4 283 43.1
Thecc.05G249800 Theobroma cacao HOM05D003715 ORTHO05D003958 2.9e-42 176.4 291 40.5
COL.COLO4_36085 Corchorus olitorius HOM05D003715 ORTHO05D003958 6.5e-42 175.3 285 39.6
Aqoxy2G00514 Aquilegia oxysepala HOM05D003715 ORTHO05D003958 1.2e-40 171.0 280 39.6
Gohir.D11G246200 Gossypium hirsutum HOM05D003715 ORTHO05D003958 1.6e-40 170.6 291 40.5
VMungo0464G1653 Vigna mungo HOM05D003715 ORTHO05D003958 1.6e-40 170.6 285 36.5
AUR62032710 Chenopodium quinoa HOM05D003715 ORTHO05D003958 1.5e-38 164.1 273 40.7
Nitab4.5_0002769g0040 Nicotiana tabacum HOM05D003715 ORTHO05D003958 3.4e-38 162.9 278 39.2
MBI04_g28023_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 5.7e-38 162.2 285 38.6
Ah.04g153150 Amaranthus hybridus HOM05D003715 ORTHO05D003958 7.5e-38 161.8 284 42.6
PSO781G0019 Papaver somniferum HOM05D003715 ORTHO05D003958 2.2e-37 160.2 277 41.5
Phvul.004G080700 Phaseolus vulgaris HOM05D003715 ORTHO05D003958 2.2e-37 160.2 283 35.7
Ca_08274_v3 Cicer arietinum L. HOM05D003715 ORTHO05D003958 6.3e-37 158.7 280 39.6
Glyma.16G153700 Glycine max HOM05D003715 ORTHO05D003958 8.3e-37 158.3 282 36.5
Nitab4.5_0000658g0020 Nicotiana tabacum HOM05D003715 ORTHO05D003958 2.4e-36 156.8 306 37.3
Atru.chr2.1400 Acer truncatum HOM05D003715 ORTHO05D003958 5.4e-36 155.6 302 36.1
CANSAT78G1806 Cannabis sativa HOM05D003715 ORTHO05D003958 5.4e-36 155.6 306 36.3
Glyma.02G072500 Glycine max HOM05D003715 ORTHO05D003958 1.2e-35 154.5 283 36.7
MBI04_g47731_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 1.2e-35 154.5 181 48.6
PGSC0003DMG400008354 Solanum tuberosum HOM05D003715 ORTHO05D003958 1.2e-35 154.5 286 40.9
MSTRG.26069 Avicennia marina HOM05D003715 ORTHO05D003958 1.6e-35 154.1 281 35.9
Sed0021221 Sechium edule HOM05D003715 ORTHO05D003958 2.0e-35 153.7 289 38.1
Solyc10g078590.2 Solanum lycopersicum HOM05D003715 ORTHO05D003958 2.0e-35 153.7 287 40.4
Sopen10g029220 Solanum pennellii HOM05D003715 ORTHO05D003958 3.5e-35 152.9 287 40.1
Sed0002226 Sechium edule HOM05D003715 ORTHO05D003958 4.5e-35 152.5 306 35.9
TAR633G2492 Trochodendron aralioides HOM05D003715 ORTHO05D003958 5.9e-35 152.1 295 36.9
Ca_04486_v3 Cicer arietinum L. HOM05D003715 ORTHO05D003958 1.7e-34 150.6 273 38.1
Ciclev10021362m.g Citrus clementina HOM05D003715 ORTHO05D003958 3.8e-34 149.4 299 37.1
Cc06_g23060 Coffea canephora HOM05D003715 ORTHO05D003958 3.8e-34 149.4 171 49.1
SGA_v2.0_scaffold94G28404 Striga asiatica HOM05D003715 ORTHO05D003958 6.5e-34 148.7 276 39.1
Nn2g12054 Nelumbo nucifera HOM05D003715 ORTHO05D003958 8.6e-34 148.3 290 37.2
Peaxi162Scf00003g04827 Petunia axillaris HOM05D003715 ORTHO05D003958 8.6e-34 148.3 284 40.5
Lalb_Chr02g0157161 Lupinus albus HOM05D003715 ORTHO05D003958 1.1e-33 147.9 270 39.3
Nitab4.5_0000358g0150 Nicotiana tabacum HOM05D003715 ORTHO05D003958 1.1e-33 147.9 275 40.0
DCAR_019875 Daucus carota HOM05D003715 ORTHO05D003958 1.5e-33 147.5 288 35.4
Lj1g0002462 Lotus japonicus HOM05D003715 ORTHO05D003958 1.5e-33 147.5 275 38.2
TPR.G5870 Trifolium pratense HOM05D003715 ORTHO05D003958 7.2e-33 145.2 282 36.9
TPR.G9142 Trifolium pratense HOM05D003715 ORTHO05D003958 1.2e-32 144.4 269 35.3
Glyma.16G040300 Glycine max HOM05D003715 ORTHO05D003958 1.6e-32 144.1 287 35.5
Medtr6g029250 Medicago truncatula HOM05D003715 ORTHO05D003958 1.6e-32 144.1 266 37.2
Medtr7g085790 Medicago truncatula HOM05D003715 ORTHO05D003958 2.1e-32 143.7 271 38.7
Glyma.19G112800 Glycine max HOM05D003715 ORTHO05D003958 4.7e-32 142.5 297 34.3
Psat3g088760 Pisum sativum HOM05D003715 ORTHO05D003958 6.1e-32 142.1 278 36.7
HanXRQChr14g0438161 Helianthus annuus HOM05D003715 ORTHO05D003958 8.0e-32 141.7 294 36.7
MBI01_g25640_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 8.0e-32 141.7 323 35.6
Nn7g35866 Nelumbo nucifera HOM05D003715 ORTHO05D003958 1.0e-31 141.4 289 37.7
Cpa.g.sc51.130 Carica papaya HOM05D003715 ORTHO05D003958 1.8e-31 140.6 299 35.1
Duzib128G0041 Durio zibethinus HOM05D003715 ORTHO05D003958 3.0e-31 139.8 272 36.8
ECA238G2879 Erigeron canadensis HOM05D003715 ORTHO05D003958 5.2e-31 139.0 288 36.5
Nitab4.5_0001079g0120 Nicotiana tabacum HOM05D003715 ORTHO05D003958 1.7e-29 134.0 258 38.4
Lj1g0012553 Lotus japonicus HOM05D003715 ORTHO05D003958 2.8e-29 133.3 285 35.8
Lalb_Chr22g0359081 Lupinus albus HOM05D003715 ORTHO05D003958 3.7e-29 132.9 287 35.2
Psat1g091040 Pisum sativum HOM05D003715 ORTHO05D003958 6.3e-29 132.1 263 34.6
arahy.Tifrunner.gnm1.ann1.V3MY1S Arachis hypogaea HOM05D003715 ORTHO05D003958 1.1e-28 131.3 282 33.3
CiPaw.09G002400 Carya illinoinensis HOM05D003715 ORTHO05D003958 1.4e-28 131.0 265 33.2
TAR369G0375 Trochodendron aralioides HOM05D003715 ORTHO05D003958 4.1e-28 129.4 258 36.8
RcHm_v2.0_Chr3g0497011 Rosa chinensis HOM05D003715 ORTHO05D003958 5.4e-28 129.0 317 35.3
Prupe.7G006100 Prunus persica HOM05D003715 ORTHO05D003958 1.2e-27 127.9 317 34.4
MD14G1003600 Malus domestica HOM05D003715 ORTHO05D003958 3.5e-27 126.3 307 35.5
FvH4_1g28230 Fragaria vesca HOM05D003715 ORTHO05D003958 4.5e-27 125.9 297 36.0
CARHR077990 Cardamine hirsuta HOM05D003715 ORTHO05D003958 5.9e-27 125.6 274 36.9
Eucgr.K01502 Eucalyptus grandis HOM05D003715 ORTHO05D003958 5.9e-27 125.6 299 37.1
Nitab4.5_0000394g0140 Nicotiana tabacum HOM05D003715 ORTHO05D003958 1.0e-26 124.8 293 35.5
FAN26G1768 Fragaria x ananassa HOM05D003715 ORTHO05D003958 1.7e-26 124.0 291 35.4
Nitab4.5_0009367g0020 Nicotiana tabacum HOM05D003715 ORTHO05D003958 1.7e-26 124.0 259 36.3
CDE02G4343 Ceratophyllum demersum HOM05D003715 ORTHO05D003958 2.3e-26 123.6 284 33.5
PGSC0003DMG400023700 Solanum tuberosum HOM05D003715 ORTHO05D003958 6.6e-26 122.1 260 36.2
Thhalv10021350m.g Eutrema salsugineum HOM05D003715 ORTHO05D003958 8.6e-26 121.7 274 35.4
FAN23G0877 Fragaria x ananassa HOM05D003715 ORTHO05D003958 1.1e-25 121.3 291 34.4
Phvul.001G111500 Phaseolus vulgaris HOM05D003715 ORTHO05D003958 1.5e-25 120.9 299 30.8
Sp6g26180 Schrenkiella parvula HOM05D003715 ORTHO05D003958 1.5e-25 120.9 300 34.3
AT3G03870 Arabidopsis thaliana HOM05D003715 ORTHO05D003958 1.9e-25 120.6 284 37.3
ECA233G0839 Erigeron canadensis HOM05D003715 ORTHO05D003958 1.9e-25 120.6 282 31.9
AL3G13760 Arabidopsis lyrata HOM05D003715 ORTHO05D003958 2.5e-25 120.2 280 36.8
C02p09710 Brassica napus HOM05D003715 ORTHO05D003958 7.3e-25 118.6 286 36.0
CDE05G3048 Ceratophyllum demersum HOM05D003715 ORTHO05D003958 7.3e-25 118.6 282 32.6
MD12G1005100 Malus domestica HOM05D003715 ORTHO05D003958 7.3e-25 118.6 297 36.7
Solyc10g080670.2 Solanum lycopersicum HOM05D003715 ORTHO05D003958 9.5e-25 118.2 260 36.5
Carub.0003s0306 Capsella rubella HOM05D003715 ORTHO05D003958 1.2e-24 117.9 279 36.2
Lalb_Chr14g0364551 Lupinus albus HOM05D003715 ORTHO05D003958 1.2e-24 117.9 271 32.8
BolC2t06880H Brassica oleracea HOM05D003715 ORTHO05D003958 1.6e-24 117.5 286 35.3
FAN28G3019 Fragaria x ananassa HOM05D003715 ORTHO05D003958 1.6e-24 117.5 291 34.4
Sopen10g031210 Solanum pennellii HOM05D003715 ORTHO05D003958 1.6e-24 117.5 260 37.3
Thhalv10014292m.g Eutrema salsugineum HOM05D003715 ORTHO05D003958 2.8e-24 116.7 301 34.9
HanXRQChr13g0397871 Helianthus annuus HOM05D003715 ORTHO05D003958 3.6e-24 116.3 269 30.5
Actinidia38611 Actinidia chinensis HOM05D003715 ORTHO05D003958 6.1e-24 115.5 261 35.6
AT5G18130 Arabidopsis thaliana HOM05D003715 ORTHO05D003958 6.1e-24 115.5 288 36.1
A10p21370 Brassica napus HOM05D003715 ORTHO05D003958 6.1e-24 115.5 303 35.0
Lsat_1_v5_gn_6_37461 Lactuca sativa HOM05D003715 ORTHO05D003958 8.0e-24 115.2 275 32.7
BcaC05g30247 Brassica carinata HOM05D003715 ORTHO05D003958 1.4e-23 114.4 283 35.0
vmacro09135 Vaccinium macrocarpon HOM05D003715 ORTHO05D003958 1.4e-23 114.4 238 36.6
AL6G29330 Arabidopsis lyrata HOM05D003715 ORTHO05D003958 1.8e-23 114.0 296 34.8
C09p58840 Brassica napus HOM05D003715 ORTHO05D003958 2.3e-23 113.6 301 34.9
Carub.0006s1642 Capsella rubella HOM05D003715 ORTHO05D003958 2.3e-23 113.6 284 34.9
BcaB01g06399 Brassica carinata HOM05D003715 ORTHO05D003958 3.0e-23 113.2 284 34.9
BcaC03g13579 Brassica carinata HOM05D003715 ORTHO05D003958 3.0e-23 113.2 286 35.0
A02p04750 Brassica napus HOM05D003715 ORTHO05D003958 4.0e-23 112.8 291 33.7
Sp3g02840 Schrenkiella parvula HOM05D003715 ORTHO05D003958 1.2e-22 111.3 277 34.3
THA.LOC104820776 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 1.2e-22 111.3 296 33.4
BolC3t13497H Brassica oleracea HOM05D003715 ORTHO05D003958 1.5e-22 110.9 288 35.1
BcaC05g29901 Brassica carinata HOM05D003715 ORTHO05D003958 2.0e-22 110.5 279 33.3
BolC1t05801H Brassica oleracea HOM05D003715 ORTHO05D003958 2.0e-22 110.5 279 32.3
BolC5t34973H Brassica oleracea HOM05D003715 ORTHO05D003958 2.0e-22 110.5 279 33.3
arahy.Tifrunner.gnm1.ann1.KTU7AY Arachis hypogaea HOM05D003715 ORTHO05D003958 2.6e-22 110.2 170 40.0
BcaB01g05177 Brassica carinata HOM05D003715 ORTHO05D003958 2.6e-22 110.2 288 35.1
C03p10110 Brassica napus HOM05D003715 ORTHO05D003958 2.6e-22 110.2 288 35.1
BraA03t10190Z Brassica rapa HOM05D003715 ORTHO05D003958 2.6e-22 110.2 288 35.1
VMungo1383G2890 Vigna mungo HOM05D003715 ORTHO05D003958 5.7e-22 109.0 292 30.8
HanXRQChr02g0054571 Helianthus annuus HOM05D003715 ORTHO05D003958 1.3e-21 107.8 287 33.1
BcaNung05741 Brassica carinata HOM05D003715 ORTHO05D003958 2.9e-21 106.7 283 33.2
BraA02t05434Z Brassica rapa HOM05D003715 ORTHO05D003958 3.7e-21 106.3 282 32.3
BraA10t44200Z Brassica rapa HOM05D003715 ORTHO05D003958 8.3e-21 105.1 271 35.1
CSS0027479 Camellia sinensis var. sinensis HOM05D003715 ORTHO05D003958 8.3e-21 105.1 93 52.7
A05p43520 Brassica napus HOM05D003715 ORTHO05D003958 1.1e-20 104.8 274 33.6
CARHR194940 Cardamine hirsuta HOM05D003715 ORTHO05D003958 1.1e-20 104.8 309 32.7
BolC9t58728H Brassica oleracea HOM05D003715 ORTHO05D003958 4.1e-20 102.8 267 34.5
MBI04_g37012_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 4.1e-20 102.8 184 38.0
A03p08670 Brassica napus HOM05D003715 ORTHO05D003958 5.4e-20 102.4 288 33.0
Rhsim04G0091400 Rhododendron simsii HOM05D006013 ORTHO05D007383 7.0e-20 102.1 249 36.1
BcaB08g36703 Brassica carinata HOM05D003715 ORTHO05D003958 9.2e-20 101.7 275 33.1
SalBow1G3164 Salvia bowleyana HOM05D003715 ORTHO05D003958 9.2e-20 101.7 179 38.5
ATR0737G080 Amborella trichopoda HOM05D003715 ORTHO05D003958 1.2e-19 101.3 294 32.0
BcaB05g23302 Brassica carinata HOM05D003715 ORTHO05D003958 2.0e-19 100.5 293 31.1
BraA05t23092Z Brassica rapa HOM05D003715 ORTHO05D003958 3.5e-19 99.8 270 33.7
Aqoxy1G00472 Aquilegia oxysepala HOM05D003715 ORTHO05D003958 1.0e-18 98.2 281 31.0
Duzib106G0556 Durio zibethinus HOM05D003715 ORTHO05D003958 8.6e-18 95.1 224 34.8
arahy.Tifrunner.gnm1.ann1.FCYU2S Arachis hypogaea HOM05D003715 ORTHO05D003958 2.5e-17 93.6 281 31.7
Peaxi162Scf00249g00717 Petunia axillaris HOM05D003715 ORTHO05D003958 3.3e-17 93.2 265 30.9
PSO384G3057 Papaver somniferum HOM05D003715 ORTHO05D003958 2.8e-16 90.1 143 39.9
Aa31LG11G11470 Aethionema arabicum HOM05D003715 ORTHO05D003958 8.0e-16 88.6 289 30.1
BcaC05g30288 Brassica carinata HOM05D003715 ORTHO05D003958 1.8e-15 87.4 88 52.3
Os03g0806600 Oryza sativa ssp. japonica HOM05D003715 ORTHO05D003958 2.3e-15 87.0 269 29.4
Aa31LG5G14450 Aethionema arabicum HOM05D003715 ORTHO05D003958 6.8e-15 85.5 278 30.9
PSO782G0808 Papaver somniferum HOM05D003715 ORTHO05D003958 9.8e-14 81.6 131 38.9
FAN19G0160 Fragaria x ananassa HOM05D003715 ORTHO05D003958 1.7e-13 80.9 269 30.9
TAR633G2325 Trochodendron aralioides HOM05D003715 ORTHO05D003958 3.7e-13 79.7 153 37.9
VMungo1383G0996 Vigna mungo HOM05D002467 ORTHO05D013374 1.9e-12 77.4 75 48.0
Lsat_1_v5_gn_2_58261 Lactuca sativa HOM05D003715 ORTHO05D003958 2.4e-12 77.0 230 31.3
THA.LOC104802870 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 9.2e-12 75.1 287 31.0
Zm00001eb302900 Zea mays HOM05D003715 ORTHO05D003958 3.5e-11 73.2 95 42.1
Os07g0204100 Oryza sativa ssp. japonica HOM05D003715 ORTHO05D003958 3.9e-10 69.7 93 46.2
unitig_0.g211 Utricularia gibba HOM05D003715 ORTHO05D003958 3.9e-10 69.7 264 25.8
arahy.Tifrunner.gnm1.ann1.85Z4HY Arachis hypogaea HOM05D003715 ORTHO05D003958 3.3e-09 66.6 98 35.7
SEGI_20586 Sequoiadendron giganteum HOM05D003715 ORTHO05D003958 5.6e-09 65.9 97 38.1


User provided reference genes

Program Settings