Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 1.8e-156 555.8 274 100.0
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 1.6e-96 356.7 273 66.7
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 1.4e-92 343.6 272 65.1
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 2.4e-92 342.8 275 67.6
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 7.8e-75 284.6 280 53.6
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 1.0e-74 284.3 273 53.8
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 5.0e-74 282.0 273 52.7
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 5.0e-74 282.0 273 53.5
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 8.6e-74 281.2 276 51.8
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 3.3e-73 279.3 273 53.1
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 9.5e-73 277.7 273 53.1
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 9.5e-73 277.7 273 53.1
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 2.1e-72 276.6 273 53.5
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 6.2e-72 275.0 270 54.1
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 8.1e-72 274.6 276 53.3
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 1.1e-71 274.2 276 53.3
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 1.1e-71 274.2 228 59.6
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 3.1e-71 272.7 273 52.7
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 6.8e-71 271.6 276 52.9
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 3.4e-70 269.2 208 62.0
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 3.4e-70 269.2 271 53.5
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 5.8e-70 268.5 278 53.2
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 7.5e-70 268.1 213 60.1
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 1.3e-69 267.3 188 67.6
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 4.9e-69 265.4 273 52.7
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 1.1e-68 264.2 200 62.0
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 1.9e-68 263.5 272 51.8
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 4.1e-68 262.3 221 58.4
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 9.2e-68 261.2 275 50.5
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 1.6e-67 260.4 228 57.0
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 2.1e-67 260.0 276 49.3
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 2.7e-67 259.6 210 59.5
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 2.7e-67 259.6 209 59.3
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 4.6e-67 258.8 210 59.5
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 6.0e-67 258.5 270 52.6
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 7.8e-67 258.1 276 50.7
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 7.8e-67 258.1 209 59.3
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 1.0e-66 257.7 216 57.9
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 1.0e-66 257.7 203 60.1
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 1.3e-66 257.3 271 50.6
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 1.7e-66 256.9 271 48.3
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 3.9e-66 255.8 285 47.7
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 3.9e-66 255.8 206 59.7
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 3.9e-66 255.8 218 55.5
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 6.6e-66 255.0 266 49.6
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 6.6e-66 255.0 228 54.4
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 8.6e-66 254.6 222 55.9
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 1.5e-65 253.8 282 50.0
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 1.9e-65 253.4 201 60.2
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 1.9e-65 253.4 242 51.7
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 4.3e-65 252.3 252 50.8
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 5.6e-65 251.9 270 50.7
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 9.5e-65 251.1 199 58.8
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 9.5e-65 251.1 199 58.8
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 9.5e-65 251.1 231 53.2
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 9.5e-65 251.1 201 60.2
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 1.6e-64 250.4 270 50.7
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 2.8e-64 249.6 273 50.2
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 6.2e-64 248.4 274 47.4
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 6.2e-64 248.4 245 53.1
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 1.1e-63 247.7 276 48.6
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 1.4e-63 247.3 238 50.8
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 1.4e-63 247.3 255 51.0
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 2.4e-63 246.5 278 49.3
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 2.4e-63 246.5 288 46.5
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 3.1e-63 246.1 252 52.8
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 3.1e-63 246.1 271 48.0
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 4.0e-63 245.7 272 50.4
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 4.0e-63 245.7 201 58.2
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 5.2e-63 245.4 252 52.4
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 6.8e-63 245.0 199 56.8
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 8.9e-63 244.6 269 50.2
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 3.4e-62 242.7 213 56.8
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 3.4e-62 242.7 213 56.8
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 3.4e-62 242.7 213 56.8
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 5.8e-62 241.9 254 49.2
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 9.9e-62 241.1 252 52.0
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 1.3e-61 240.7 275 49.1
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 2.2e-61 240.0 200 56.5
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 3.8e-61 239.2 199 57.3
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 9.2e-60 234.6 267 46.8
Phvul.001G144400 Phaseolus vulgaris HOM05D006815 ORTHO05D008536 9.2e-60 234.6 203 58.1
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 9.2e-60 234.6 211 57.3
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 1.3e-58 230.7 237 48.5
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 6.6e-58 228.4 271 45.0
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 8.6e-58 228.0 201 56.2
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 8.6e-58 228.0 272 44.1
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 1.5e-57 227.3 273 47.6
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 1.9e-57 226.9 207 53.6
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 3.3e-57 226.1 267 45.7
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 9.6e-57 224.6 207 53.1
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 1.2e-54 217.6 217 48.4
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 2.0e-54 216.9 273 45.1
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 8.4e-53 211.5 273 43.6
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 7.1e-52 208.4 229 45.9
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 7.1e-52 208.4 254 46.1
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 1.1e-49 201.1 204 51.0
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 9.0e-47 191.4 206 45.6
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 1.2e-46 191.0 206 45.6
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 9.9e-46 188.0 198 53.0
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 1.8e-42 177.2 146 58.2
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 1.6e-40 170.6 150 54.7
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 1.1e-39 167.9 154 55.8
Os03g0226700 Oryza sativa ssp. japonica HOM05D006815 ORTHO05D008536 2.3e-34 150.2 230 37.4
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 9.6e-33 144.8 130 56.2
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 1.3e-32 144.4 189 40.2
Pp3c12_7730 Physcomitrium patens HOM05D006815 ORTHO05D008536 2.8e-24 116.7 169 40.2
Mapoly0159s0012 Marchantia polymorpha HOM05D006815 ORTHO05D008536 6.3e-24 115.5 190 35.3
BcaC03g14280 Brassica carinata HOM05D006815 ORTHO05D008536 2.5e-20 103.6 186 38.2
Zm00001eb009870 Zea mays HOM05D006815 ORTHO05D008536 1.5e-17 94.4 171 35.1
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea HOM05D006815 ORTHO05D008536 4.3e-17 92.8 75 58.7
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 5.7e-17 92.4 128 38.3
CARHR137080 Cardamine hirsuta HOM05D006815 ORTHO05D008536 1.3e-13 81.3 63 60.3
Nn6g34990 Nelumbo nucifera HOM05D006815 ORTHO05D008536 9.4e-12 75.1 65 50.8
C02p16600 Brassica napus HOM05D006815 ORTHO05D008536 1.8e-10 70.9 65 56.9
BolC2t07761H Brassica oleracea HOM05D006815 ORTHO05D008536 1.1e-09 68.2 65 55.4


User provided reference genes

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