Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund19193 Selenicereus undatus HOM05D006823 ORTHO05D008608 1.5e-131 473.0 269 100.0
EL10Ac3g06941 Beta vulgaris HOM05D006823 ORTHO05D008608 4.1e-76 288.9 283 64.7
ClCG10G017400 Citrullus lanatus HOM05D006823 ORTHO05D008608 2.5e-73 279.6 264 63.6
Sed0007671 Sechium edule HOM05D006823 ORTHO05D008608 3.2e-73 279.3 271 64.6
CSS0029489 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.7e-72 276.2 271 57.2
THA.LOC104802464 Tarenaya hassleriana HOM05D006823 ORTHO05D008608 4.6e-72 275.4 273 64.1
Manes.08G045100 Manihot esculenta HOM05D006823 ORTHO05D008608 1.1e-70 270.8 277 63.5
CsaV3_3G038970 Cucumis sativus L. HOM05D006823 ORTHO05D008608 1.5e-70 270.4 264 60.6
CANSAT64G2950 Cannabis sativa HOM05D006823 ORTHO05D008608 2.5e-70 269.6 258 64.0
Rhsim04G0097800 Rhododendron simsii HOM05D006823 ORTHO05D008608 2.5e-70 269.6 271 64.9
Actinidia17264 Actinidia chinensis HOM05D006823 ORTHO05D008608 7.4e-70 268.1 273 63.0
Ca_12095_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 7.4e-70 268.1 256 60.2
Sabra16G0052300 Salix brachista HOM05D006823 ORTHO05D008608 9.7e-70 267.7 276 62.0
Nn7g36040 Nelumbo nucifera HOM05D006823 ORTHO05D008608 1.3e-69 267.3 261 62.5
CSS0004284 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 2.8e-69 266.2 270 60.0
Psat1g009680 Pisum sativum HOM05D006823 ORTHO05D008608 2.8e-69 266.2 255 60.0
Potri.016G048600 Populus trichocarpa HOM05D006823 ORTHO05D008608 2.8e-69 266.2 272 61.0
Lsat_1_v5_gn_8_75541 Lactuca sativa HOM05D006823 ORTHO05D008608 4.8e-69 265.4 257 65.4
Phvul.007G258100 Phaseolus vulgaris HOM05D006823 ORTHO05D008608 6.3e-69 265.0 275 59.6
Glyma.02G177100 Glycine max HOM05D006823 ORTHO05D008608 8.2e-69 264.6 273 58.2
Ca_26114_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 1.4e-68 263.8 256 59.8
Medtr1g053570 Medicago truncatula HOM05D006823 ORTHO05D008608 1.4e-68 263.8 273 54.6
FAN09G2832 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.8e-68 263.5 251 62.5
Ciclev10012490m.g Citrus clementina HOM05D006823 ORTHO05D008608 3.1e-68 262.7 271 59.8
DCAR_013557 Daucus carota HOM05D006823 ORTHO05D008608 4.1e-68 262.3 254 65.7
FvH4_6g22650 Fragaria vesca HOM05D006823 ORTHO05D008608 5.3e-68 261.9 252 62.3
FAN14G3816 Fragaria x ananassa HOM05D006823 ORTHO05D008608 5.3e-68 261.9 252 62.7
Duzib093G0556 Durio zibethinus HOM05D006823 ORTHO05D008608 1.2e-67 260.8 270 62.6
GSVIVG01033521001 Vitis vinifera HOM05D006823 ORTHO05D008608 1.2e-67 260.8 272 61.0
FAN14G5352 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.5e-67 260.4 252 62.7
TPR.G24279 Trifolium pratense HOM05D006823 ORTHO05D008608 2.6e-67 259.6 275 54.2
PSO339G6540 Papaver somniferum HOM05D006823 ORTHO05D008608 3.4e-67 259.2 257 62.6
FAN05G5147 Fragaria x ananassa HOM05D006823 ORTHO05D008608 5.9e-67 258.5 251 62.2
Prupe.7G074100 Prunus persica HOM05D006823 ORTHO05D008608 5.9e-67 258.5 256 65.6
Dinv24090 Davidia involucrata HOM05D006823 ORTHO05D008608 1.0e-66 257.7 254 66.1
CiPaw.09G031900 Carya illinoinensis HOM05D006823 ORTHO05D008608 1.7e-66 256.9 272 63.2
Gorai.006G141900 Gossypium raimondii HOM05D006823 ORTHO05D008608 1.7e-66 256.9 255 65.5
Sp5g04810 Schrenkiella parvula HOM05D006823 ORTHO05D008608 2.2e-66 256.5 259 62.9
TWI74G0728 Tripterygium wilfordii HOM05D006823 ORTHO05D008608 2.2e-66 256.5 271 60.9
Atru.chr8.1064 Acer truncatum HOM05D006823 ORTHO05D008608 2.9e-66 256.1 260 60.4
CARHR168210 Cardamine hirsuta HOM05D006823 ORTHO05D008608 2.9e-66 256.1 259 62.9
RcHm_v2.0_Chr3g0480211 Rosa chinensis HOM05D006823 ORTHO05D008608 2.9e-66 256.1 250 65.6
Thhalv10006171m.g Eutrema salsugineum HOM05D006823 ORTHO05D008608 3.8e-66 255.8 259 62.9
Gohir.D09G123300 Gossypium hirsutum HOM05D006823 ORTHO05D008608 5.0e-66 255.4 252 65.1
AT3G57910 Arabidopsis thaliana HOM05D006823 ORTHO05D008608 6.5e-66 255.0 260 62.3
COL.COLO4_36138 Corchorus olitorius HOM05D006823 ORTHO05D008608 6.5e-66 255.0 250 58.4
Thecc.05G168800 Theobroma cacao HOM05D006823 ORTHO05D008608 6.5e-66 255.0 248 64.5
AL5G39560 Arabidopsis lyrata HOM05D006823 ORTHO05D008608 8.5e-66 254.6 260 61.9
MD14G1060400 Malus domestica HOM05D006823 ORTHO05D008608 8.5e-66 254.6 256 63.3
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 1.1e-65 254.2 260 63.5
arahy.Tifrunner.gnm1.ann1.DD58DK Arachis hypogaea HOM05D006823 ORTHO05D008608 1.4e-65 253.8 273 57.9
MBI01_g24371_MAGBIO Magnolia biondii HOM05D006823 ORTHO05D008608 1.9e-65 253.4 283 56.5
PSO384G3045 Papaver somniferum HOM05D006823 ORTHO05D008608 2.5e-65 253.1 256 60.5
BcaC08g44877 Brassica carinata HOM05D006823 ORTHO05D008608 3.2e-65 252.7 260 63.1
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 3.2e-65 252.7 260 63.1
arahy.Tifrunner.gnm1.ann1.F8HZ0X Arachis hypogaea HOM05D006823 ORTHO05D008608 7.2e-65 251.5 270 57.4
Glyma.10G091300 Glycine max HOM05D006823 ORTHO05D008608 7.2e-65 251.5 278 56.5
HanXRQChr05g0132841 Helianthus annuus HOM05D006823 ORTHO05D008608 9.4e-65 251.1 258 62.4
Lj5g0012941 Lotus japonicus HOM05D006823 ORTHO05D008608 3.6e-64 249.2 272 55.9
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 1.4e-63 247.3 282 58.2
BraA07t30025Z Brassica rapa HOM05D006823 ORTHO05D008608 1.8e-63 246.9 282 58.2
Eucgr.K01827 Eucalyptus grandis HOM05D006823 ORTHO05D008608 1.8e-63 246.9 274 59.9
BcaB02g07567 Brassica carinata HOM05D006823 ORTHO05D008608 3.0e-63 246.1 259 60.2
CSS0050046 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 3.0e-63 246.1 271 57.2
Carub.0005s2475 Capsella rubella HOM05D006823 ORTHO05D008608 3.0e-63 246.1 251 58.6
CDE04G3233 Ceratophyllum demersum HOM05D006823 ORTHO05D008608 1.1e-62 244.2 254 61.4
SGA_v2.0_scaffold69G23076 Striga asiatica HOM05D006823 ORTHO05D008608 4.4e-62 242.3 270 59.3
Solyc11g065380.2 Solanum lycopersicum HOM05D006823 ORTHO05D008608 1.7e-61 240.4 256 61.3
Sc25g0005140 Simmondsia chinensis HOM05D006823 ORTHO05D008608 3.7e-61 239.2 250 62.4
MSTRG.19895 Avicennia marina HOM05D006823 ORTHO05D008608 8.2e-61 238.0 255 58.4
AUR62012062 Chenopodium quinoa HOM05D006823 ORTHO05D008608 1.1e-60 237.7 255 56.1
Lalb_Chr10g0091151 Lupinus albus HOM05D006823 ORTHO05D008608 1.4e-60 237.3 260 56.5
FAN02G3510 Fragaria x ananassa HOM05D006823 ORTHO05D008608 9.1e-60 234.6 253 59.3
Aa31LG10G12620 Aethionema arabicum HOM05D006823 ORTHO05D008608 2.0e-59 233.4 254 60.2
AUR62024323 Chenopodium quinoa HOM05D006823 ORTHO05D008608 5.9e-59 231.9 275 52.7
vmacro09107 Vaccinium macrocarpon HOM05D006823 ORTHO05D008608 7.7e-59 231.5 223 65.0
arahy.Tifrunner.gnm1.ann1.R1CCT6 Arachis hypogaea HOM05D006823 ORTHO05D008608 1.7e-58 230.3 200 65.0
TAR623G1194 Trochodendron aralioides HOM05D006823 ORTHO05D008608 8.5e-58 228.0 247 61.5
PGSC0003DMG401029997 Solanum tuberosum HOM05D006823 ORTHO05D008608 1.4e-57 227.3 256 59.0
unitig_26.g9037 Utricularia gibba HOM05D006823 ORTHO05D008608 1.9e-57 226.9 257 57.2
HPP92_015470 Vanilla planifolia HOM05D006823 ORTHO05D008608 3.2e-57 226.1 255 56.9
Haze_19965 Corylus avellana HOM05D006823 ORTHO05D008608 5.5e-57 225.3 272 55.9
Lj2A371G33 Lonicera japonica HOM05D006823 ORTHO05D008608 6.1e-56 221.9 254 58.3
Migut.J01822 Erythranthe guttata HOM05D006823 ORTHO05D008608 1.4e-55 220.7 251 58.2
arahy.Tifrunner.gnm1.ann1.R3LTDD Arachis hypogaea HOM05D006823 ORTHO05D008608 3.0e-55 219.5 247 57.5
Sopen11g025160 Solanum pennellii HOM05D006823 ORTHO05D008608 3.0e-55 219.5 252 58.7
ECA236G4823 Erigeron canadensis HOM05D006823 ORTHO05D000001 2.0e-54 216.9 243 56.8
Nitab4.5_0003572g0020 Nicotiana tabacum HOM05D006823 ORTHO05D008608 5.7e-54 215.3 256 55.1
CAN.G717.3 Capsicum annuum HOM05D006823 ORTHO05D008608 1.4e-52 210.7 236 59.3
Nitab4.5_0000016g0280 Nicotiana tabacum HOM05D006823 ORTHO05D008608 1.6e-51 207.2 271 53.5
MELO3C009640.2 Cucumis melo HOM05D006823 ORTHO05D008608 2.9e-50 203.0 200 58.5
ATR0605G325 Amborella trichopoda HOM05D006823 ORTHO05D008608 2.5e-49 199.9 200 61.5
VMungo0720G1016 Vigna mungo HOM05D006823 ORTHO05D008608 3.2e-49 199.5 209 58.4
arahy.Tifrunner.gnm1.ann1.HB0B2V Arachis hypogaea HOM05D006823 ORTHO05D008608 1.2e-48 197.6 276 52.9
Cc00_g14630 Coffea canephora HOM05D006823 ORTHO05D008608 2.1e-48 196.8 259 54.8
Gohir.A09G127050 Gossypium hirsutum HOM05D006823 ORTHO05D008608 1.0e-47 194.5 201 60.2
CSS0035925 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.8e-44 183.7 159 64.2
Aqoxy1G00161 Aquilegia oxysepala HOM05D006823 ORTHO05D008608 5.3e-44 182.2 194 53.6
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 5.0e-42 175.6 259 40.9
Zm00001eb035020 Zea mays HOM05D006823 ORTHO05D008608 1.5e-41 174.1 261 43.3
CSS0008909 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.4e-39 167.5 155 56.1
Os08g0509500 Oryza sativa ssp. japonica HOM05D006823 ORTHO05D008608 2.3e-39 166.8 262 48.9
Mapoly0104s0025 Marchantia polymorpha HOM05D006823 ORTHO05D008608 9.8e-38 161.4 259 39.4
CSS0018235 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.4e-36 157.5 165 58.8
FvH4_6g22250 Fragaria vesca HOM05D006823 ORTHO05D008608 1.1e-33 147.9 158 54.4
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 9.5e-33 144.8 275 42.9
CSS0004878 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 4.1e-28 129.4 101 65.3
CSS0021268 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 4.1e-28 129.4 101 65.3
arahy.Tifrunner.gnm1.ann1.WS1HM8 Arachis hypogaea HOM05D006823 ORTHO05D008608 2.3e-26 123.6 102 66.7
AagrBONN_evm.TU.Sc2ySwM_369.80 Anthoceros agrestis HOM05D006823 ORTHO05D008608 2.8e-24 116.7 253 38.3
SMO145G0064 Selaginella moellendorffii HOM05D006823 ORTHO05D008608 4.0e-23 112.8 247 38.5
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 3.7e-21 106.3 163 41.1
arahy.Tifrunner.gnm1.ann1.ZK4YW6 Arachis hypogaea HOM05D006823 ORTHO05D008608 8.6e-18 95.1 200 37.5
Zm00001eb092000 Zea mays HOM05D006823 ORTHO05D008608 1.1e-15 88.2 128 44.5
CBR_g4860 Chara braunii HOM05D006823 ORTHO05D008608 8.9e-15 85.1 336 26.2
arahy.Tifrunner.gnm1.ann1.V1GDUY Arachis hypogaea HOM05D006823 ORTHO05D008608 4.9e-13 79.3 71 62.0
Cpa.g.sc85.85 Carica papaya HOM05D006823 ORTHO05D008608 7.0e-12 75.5 45 71.1
Zm00001eb385990 Zea mays HOM05D006823 ORTHO05D008608 2.3e-10 70.5 104 44.2
Peaxi162Scf00258g00118 Petunia axillaris HOM05D006823 ORTHO05D008608 2.5e-09 67.0 57 56.1
Zm00001eb116260 Zea mays HOM05D006823 ORTHO05D008608 6.2e-08 62.4 104 40.4
MSTRG.2272 Avicennia marina HOM05D005384 ORTHO05D006477 7.5e-06 55.5 54 46.3
Cre02.g105287 Chlamydomonas reinhardtii HOM05D004785 ORTHO05D008521 7.5e-06 55.5 65 43.1


User provided reference genes

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