Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund19134 Selenicereus undatus HOM05D007492 ORTHO05D009510 1.2e-50 203.0 110 100.0
AUR62026094 Chenopodium quinoa HOM05D007492 ORTHO05D009510 2.1e-31 139.0 112 70.5
Sc19g0006630 Simmondsia chinensis HOM05D007492 ORTHO05D009510 9.2e-27 123.6 100 71.0
EL10Ac3g07135 Beta vulgaris HOM05D007492 ORTHO05D009510 1.6e-23 112.8 112 59.8
Phvul.007G250800 Phaseolus vulgaris HOM05D007492 ORTHO05D009510 2.6e-21 105.5 108 56.5
Glyma.10G107400 Glycine max HOM05D007492 ORTHO05D009510 9.9e-21 103.6 91 64.8
Cfa016781 Carpinus fangiana HOM05D007492 ORTHO05D009510 1.9e-19 99.4 96 57.3
Potri.006G046800 Populus trichocarpa HOM05D007492 ORTHO05D009510 2.4e-19 99.0 94 57.4
arahy.Tifrunner.gnm1.ann1.BXP26X Arachis hypogaea HOM05D007492 ORTHO05D009510 3.2e-19 98.6 98 58.2
Hma1.2p1_0005F.1_g004460 Hydrangea macrophylla HOM05D007492 ORTHO05D009510 4.1e-19 98.2 100 61.0
TWI77G0158 Tripterygium wilfordii HOM05D007492 ORTHO05D009510 5.4e-19 97.8 100 56.0
arahy.Tifrunner.gnm1.ann1.7L65TE Arachis hypogaea HOM05D007492 ORTHO05D009510 7.1e-19 97.4 98 57.1
Lj5g0022766 Lotus japonicus HOM05D007492 ORTHO05D009510 7.1e-19 97.4 98 58.2
Ca_12247_v3 Cicer arietinum L. HOM05D007492 ORTHO05D009510 9.2e-19 97.1 95 57.9
SalBow6G0030 Salvia bowleyana HOM05D007492 ORTHO05D009510 9.2e-19 97.1 106 57.5
SalBow6G0474 Salvia bowleyana HOM05D007492 ORTHO05D009510 9.2e-19 97.1 106 57.5
MSTRG.19841 Avicennia marina HOM05D007492 ORTHO05D009510 1.6e-18 96.3 106 57.5
CiPaw.10G035300 Carya illinoinensis HOM05D007492 ORTHO05D009510 2.1e-18 95.9 95 58.9
Sabra06G0032400 Salix brachista HOM05D007492 ORTHO05D009510 2.1e-18 95.9 94 56.4
SGA_v2.0_scaffold105G30374 Striga asiatica HOM05D007492 ORTHO05D009510 2.1e-18 95.9 106 57.5
Oeu023131.1 Olea europaea HOM05D007492 ORTHO05D009510 2.7e-18 95.5 103 55.3
Prupe.7G053700 Prunus persica HOM05D007492 ORTHO05D009510 4.6e-18 94.7 98 55.1
Lalb_Chr21g0316561 Lupinus albus HOM05D007492 ORTHO05D009510 1.0e-17 93.6 95 54.7
Rhsim04G0106100 Rhododendron simsii HOM05D007492 ORTHO05D009510 1.0e-17 93.6 103 60.2
QL07p003630 Quercus lobata HOM05D007492 ORTHO05D009510 1.3e-17 93.2 95 55.8
Psat0s33g0080 Pisum sativum HOM05D007492 ORTHO05D009510 1.7e-17 92.8 95 56.8
Manes.08G052300 Manihot esculenta HOM05D007492 ORTHO05D009510 2.3e-17 92.4 94 56.4
Duzib106G1025 Durio zibethinus HOM05D007492 ORTHO05D009510 3.9e-17 91.7 93 55.9
TAR636G3489 Trochodendron aralioides HOM05D007492 ORTHO05D009510 5.1e-17 91.3 108 55.6
CANSAT80G1179 Cannabis sativa HOM05D007492 ORTHO05D009510 8.7e-17 90.5 100 55.0
Cc06_g18080 Coffea canephora HOM05D007492 ORTHO05D009510 8.7e-17 90.5 104 51.9
Gohir.D09G117400 Gossypium hirsutum HOM05D007492 ORTHO05D009510 1.5e-16 89.7 93 54.8
Medtr1g052270 Medicago truncatula HOM05D007492 ORTHO05D009510 1.5e-16 89.7 105 53.3
CANSAT80G0939 Cannabis sativa HOM05D007492 ORTHO05D009510 2.5e-16 89.0 100 54.0
Gorai.006G135800 Gossypium raimondii HOM05D007492 ORTHO05D009510 5.6e-16 87.8 93 53.8
Gohir.A09G121300 Gossypium hirsutum HOM05D007492 ORTHO05D009510 9.6e-16 87.0 93 53.8
Sed0027371 Sechium edule HOM05D007492 ORTHO05D009510 9.6e-16 87.0 99 52.5
Thecc.05G151900 Theobroma cacao HOM05D007492 ORTHO05D009510 9.6e-16 87.0 93 53.8
A07p23340 Brassica napus HOM05D007492 ORTHO05D009510 2.1e-15 85.9 101 46.5
Actinidia38130 Actinidia chinensis HOM05D007492 ORTHO05D009510 2.8e-15 85.5 106 53.8
BcaB02g07611 Brassica carinata HOM05D007492 ORTHO05D009510 2.8e-15 85.5 101 45.5
BolC6t37587H Brassica oleracea HOM05D007492 ORTHO05D009510 3.6e-15 85.1 101 46.5
BraA07t29999Z Brassica rapa HOM05D007492 ORTHO05D009510 3.6e-15 85.1 97 48.5
AUR62024507 Chenopodium quinoa HOM05D007492 ORTHO05D009510 3.6e-15 85.1 120 48.3
BcaC08g44833 Brassica carinata HOM05D007492 ORTHO05D009510 4.7e-15 84.7 101 46.5
C06p24390 Brassica napus HOM05D007492 ORTHO05D009510 4.7e-15 84.7 101 46.5
DCAR_013612 Daucus carota HOM05D007492 ORTHO05D009510 6.2e-15 84.3 104 48.1
Migut.J01728 Erythranthe guttata HOM05D007492 ORTHO05D009510 6.2e-15 84.3 100 53.0
MD12G1082300 Malus domestica HOM05D007492 ORTHO05D009510 8.1e-15 84.0 94 52.1
PGSC0003DMG400012711 Solanum tuberosum HOM05D007492 ORTHO05D009510 8.1e-15 84.0 103 52.4
Eucgr.K01714 Eucalyptus grandis HOM05D007492 ORTHO05D009510 1.1e-14 83.6 98 52.0
Eucgr.K02018 Eucalyptus grandis HOM05D007492 ORTHO05D009510 1.1e-14 83.6 98 52.0
TPR.G19665 Trifolium pratense HOM05D007492 ORTHO05D009510 1.4e-14 83.2 110 48.2
PGR004G0419 Punica granatum HOM05D007492 ORTHO05D009510 2.4e-14 82.4 111 47.7
ATR0721G123 Amborella trichopoda HOM05D007492 ORTHO05D009510 3.1e-14 82.0 100 50.0
Os07g0661700 Oryza sativa ssp. japonica HOM05D007492 ORTHO05D009510 3.1e-14 82.0 96 52.1
THA.LOC104802018 Tarenaya hassleriana HOM05D007492 ORTHO05D009510 3.1e-14 82.0 98 49.0
AL5G38860 Arabidopsis lyrata HOM05D007492 ORTHO05D009510 4.0e-14 81.6 97 48.5
Dinv39655 Davidia involucrata HOM05D007492 ORTHO05D009510 4.0e-14 81.6 93 53.8
Solyc04g150113.1 Solanum lycopersicum HOM05D007492 ORTHO05D009510 5.2e-14 81.3 103 52.4
Zm00001eb329920 Zea mays HOM05D007492 ORTHO05D009510 6.9e-14 80.9 99 49.5
Sopen04g008400 Solanum pennellii HOM05D007492 ORTHO05D009510 1.2e-13 80.1 103 52.4
Atru.chr1.1236 Acer truncatum HOM05D007492 ORTHO05D009510 2.0e-13 79.3 102 44.1
Peaxi162Scf00130g00832 Petunia axillaris HOM05D007492 ORTHO05D009510 2.0e-13 79.3 107 51.4
Sp5g05280 Schrenkiella parvula HOM05D007492 ORTHO05D009510 2.0e-13 79.3 97 46.4
FAN02G2710 Fragaria x ananassa HOM05D007492 ORTHO05D009510 2.6e-13 79.0 96 51.0
Nitab4.5_0000826g0210 Nicotiana tabacum HOM05D007492 ORTHO05D009510 4.4e-13 78.2 103 51.5
CARHR167510 Cardamine hirsuta HOM05D007492 ORTHO05D009510 5.8e-13 77.8 95 45.3
FAN14G3877 Fragaria x ananassa HOM05D007492 ORTHO05D009510 7.6e-13 77.4 96 51.0
ClCG04G003670 Citrullus lanatus HOM05D007492 ORTHO05D009510 9.9e-13 77.0 97 49.5
Lsat_1_v5_gn_5_160860 Lactuca sativa HOM05D007492 ORTHO05D009510 2.2e-12 75.9 96 51.0
HPP92_012476 Vanilla planifolia HOM05D007492 ORTHO05D009510 2.2e-12 75.9 103 45.6
FAN05G0111 Fragaria x ananassa HOM05D007492 ORTHO05D009510 2.9e-12 75.5 95 50.5
HPP92_012551 Vanilla planifolia HOM05D007492 ORTHO05D009510 6.4e-12 74.3 103 44.7
HanXRQChr13g0395971 Helianthus annuus HOM05D007492 ORTHO05D009510 8.4e-12 73.9 103 46.6
RcHm_v2.0_Chr3g0483561 Rosa chinensis HOM05D007492 ORTHO05D009510 1.1e-11 73.6 96 47.9
Carub.0005s2417 Capsella rubella HOM05D007492 ORTHO05D009510 1.9e-11 72.8 97 41.2
GSVIVG01033234001 Vitis vinifera HOM05D007492 ORTHO05D009510 2.4e-11 72.4 87 50.6
CDE04G0450 Ceratophyllum demersum HOM05D007492 ORTHO05D009510 3.2e-11 72.0 97 48.5
ECA248G1814 Erigeron canadensis HOM05D007492 ORTHO05D009510 4.2e-11 71.6 100 48.0
Aa31LG10G12190 Aethionema arabicum HOM05D007492 ORTHO05D009510 5.4e-11 71.2 97 42.3
vmacro09057 Vaccinium macrocarpon HOM05D007492 ORTHO05D009510 9.3e-11 70.5 86 52.3
Cpa.g.sc1210.1 Carica papaya HOM05D007492 ORTHO05D009510 2.1e-10 69.3 81 48.1
Mapoly0061s0071 Marchantia polymorpha HOM05D007492 ORTHO05D009510 3.5e-10 68.6 98 44.9
AagrBONN_evm.TU.Sc2ySwM_228.377 Anthoceros agrestis HOM05D007492 ORTHO05D009510 1.0e-09 67.0 99 42.4
Ciclev10005969m.g Citrus clementina HOM05D007492 ORTHO05D009510 1.0e-09 67.0 137 36.5
Haze_19797 Corylus avellana HOM05D007492 ORTHO05D009510 6.6e-09 64.3 71 49.3
Haze_19793 Corylus avellana HOM05D007492 ORTHO05D009510 8.7e-09 63.9 71 49.3
Pp3c18_6860 Physcomitrium patens HOM05D007492 ORTHO05D009510 2.5e-08 62.4 97 41.2
MELO3C026338.2 Cucumis melo HOM05D007492 ORTHO05D009510 1.3e-07 60.1 73 49.3
Aqoxy2G00252 Aquilegia oxysepala HOM05D007492 ORTHO05D009510 3.6e-07 58.5 98 40.8
Zm00001eb380160 Zea mays HOM05D007492 ORTHO05D009510 1.8e-06 56.2 85 44.7
Zm00001eb195500 Zea mays HOM05D007492 ORTHO05D009510 3.1e-06 55.5 86 43.0


User provided reference genes

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