Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund19089 Selenicereus undatus HOM05D006326 ORTHO05D007589 3.7e-221 771.5 482 100.0
AUR62030307 Chenopodium quinoa HOM05D006326 ORTHO05D007589 1.2e-81 308.1 483 52.2
AUR62018355 Chenopodium quinoa HOM05D006326 ORTHO05D007589 1.1e-79 301.6 483 51.1
EL10Ac3g07247 Beta vulgaris HOM05D006326 ORTHO05D007589 9.2e-79 298.5 482 49.8
Ah.13g076820 Amaranthus hybridus HOM05D002003 ORTHO05D002037 7.0e-71 272.3 500 43.8
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 5.8e-65 252.7 545 39.3
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 4.9e-64 249.6 549 38.8
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 1.5e-60 238.0 543 37.9
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 2.5e-60 237.3 526 42.2
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 3.6e-59 233.4 536 39.7
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 7.6e-57 225.7 547 36.9
CiPaw.09G048500 Carya illinoinensis HOM05D006326 ORTHO05D007589 7.1e-55 219.2 533 37.7
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 3.0e-53 213.8 559 39.0
Lj5g0016845 Lotus japonicus HOM05D006326 ORTHO05D007589 3.9e-53 213.4 518 38.8
MD14G1089900 Malus domestica HOM05D006326 ORTHO05D007589 5.1e-53 213.0 535 36.1
Oeu022970.2 Olea europaea HOM05D006326 ORTHO05D007589 4.0e-50 203.4 530 39.2
Sc13g0001090 Simmondsia chinensis HOM05D006326 ORTHO05D007589 5.2e-50 203.0 454 40.7
CsaV3_4G029490 Cucumis sativus L. HOM05D006326 ORTHO05D007589 1.2e-49 201.8 514 36.8
Hma1.2p1_0252F.1_g102780 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 3.4e-49 200.3 311 44.7
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 3.8e-48 196.8 502 35.5
Thecc.05G128800 Theobroma cacao HOM05D006326 ORTHO05D007589 4.9e-48 196.4 540 34.6
ClCG04G005630 Citrullus lanatus HOM05D006326 ORTHO05D007589 5.4e-47 193.0 553 34.7
Oeu057785.1 Olea europaea HOM05D006326 ORTHO05D007589 5.4e-47 193.0 506 37.0
Oeu057784.1 Olea europaea HOM05D006326 ORTHO05D007589 2.1e-46 191.0 506 37.0
Potri.016G036000 Populus trichocarpa HOM05D006326 ORTHO05D007589 2.7e-46 190.7 506 34.4
CAN.G51.3 Capsicum annuum HOM05D006326 ORTHO05D007589 7.8e-46 189.1 509 36.7
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 7.8e-46 189.1 526 37.5
Actinidia37880 Actinidia chinensis HOM05D006326 ORTHO05D007589 1.7e-45 188.0 487 37.6
Gohir.D09G115200 Gossypium hirsutum HOM05D006326 ORTHO05D007589 3.9e-45 186.8 527 37.0
Ca_05361_v3 Cicer arietinum L. HOM05D006326 ORTHO05D007589 5.1e-45 186.4 509 35.6
Potri.006G039900 Populus trichocarpa HOM05D006326 ORTHO05D007589 8.7e-45 185.7 509 36.3
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 8.7e-45 185.7 495 36.2
Psat6g129480 Pisum sativum HOM05D006326 ORTHO05D007589 1.1e-44 185.3 506 37.4
QL07p011201 Quercus lobata HOM05D006326 ORTHO05D007589 1.5e-44 184.9 532 38.2
RcHm_v2.0_Chr6g0276151 Rosa chinensis HOM05D006326 ORTHO05D007589 2.5e-44 184.1 531 34.8
Manes.09G004100 Manihot esculenta HOM05D006326 ORTHO05D007589 2.1e-43 181.0 465 38.9
FAN15G3215 Fragaria x ananassa HOM05D006326 ORTHO05D007589 6.2e-43 179.5 499 34.9
Haze_20235 Corylus avellana HOM05D006326 ORTHO05D007589 1.1e-42 178.7 424 42.0
Gorai.006G132800 Gossypium raimondii HOM05D006326 ORTHO05D007589 2.4e-42 177.6 527 37.2
Peaxi162Scf00076g00325 Petunia axillaris HOM05D006326 ORTHO05D007589 3.1e-42 177.2 545 34.1
Rhsim03G0036800 Rhododendron simsii HOM05D006326 ORTHO05D007589 6.9e-42 176.0 618 36.4
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 9.0e-42 175.6 503 35.8
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 9.0e-42 175.6 503 35.8
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 1.5e-41 174.9 521 36.5
FAN20G2839 Fragaria x ananassa HOM05D006326 ORTHO05D007589 2.0e-41 174.5 524 34.0
DCAR_013645 Daucus carota HOM05D002003 ORTHO05D002037 3.4e-41 173.7 519 33.9
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 3.4e-41 173.7 515 40.8
Lalb_Chr02g0156611 Lupinus albus HOM05D006326 ORTHO05D007589 1.1e-39 168.7 518 37.3
MSTRG.19798 Avicennia marina HOM05D006326 ORTHO05D007589 1.4e-39 168.3 494 37.4
Lsat_1_v5_gn_9_29721 Lactuca sativa HOM05D006326 ORTHO05D007589 1.9e-39 167.9 498 39.8
unitig_60.g25479 Utricularia gibba HOM05D006326 ORTHO05D007589 2.7e-38 164.1 487 33.3
Solyc12g020000.3 Solanum lycopersicum HOM05D006326 ORTHO05D007589 4.6e-38 163.3 335 40.6
ECA247G0820 Erigeron canadensis HOM05D006326 ORTHO05D007589 1.7e-37 161.4 259 45.2
CARHR166860 Cardamine hirsuta HOM05D006326 ORTHO05D007589 6.6e-37 159.5 502 36.9
FvH4_2g14070 Fragaria vesca HOM05D006326 ORTHO05D007589 6.6e-37 159.5 518 33.2
Phvul.007G233400 Phaseolus vulgaris HOM05D006326 ORTHO05D007589 1.1e-36 158.7 512 32.0
ATR0317G072 Amborella trichopoda HOM05D006326 ORTHO05D007589 1.9e-36 157.9 584 32.2
VMungo0720G1800 Vigna mungo HOM05D006326 ORTHO05D007589 3.6e-35 153.7 303 39.3
Medtr1g050510 Medicago truncatula HOM05D006326 ORTHO05D007589 4.8e-35 153.3 474 36.5
Sp5g05840 Schrenkiella parvula HOM05D006326 ORTHO05D007589 8.1e-35 152.5 498 34.1
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 1.1e-34 152.1 541 34.0
Aa31LG10G11560 Aethionema arabicum HOM05D006326 ORTHO05D007589 2.4e-34 151.0 521 31.7
unitig_0.g603 Utricularia gibba HOM05D006326 ORTHO05D007589 4.0e-34 150.2 167 55.7
Aqoxy1G00376 Aquilegia oxysepala HOM05D006326 ORTHO05D007589 9.0e-34 149.1 543 32.2
BolC8t50813H Brassica oleracea HOM05D006326 ORTHO05D007589 9.0e-34 149.1 205 46.8
COL.COLO4_37458 Corchorus olitorius HOM05D006326 ORTHO05D007589 2.9e-32 144.1 459 32.0
Sopen12g010520 Solanum pennellii HOM05D006326 ORTHO05D007589 1.9e-31 141.4 468 32.3
SGA_v2.0_scaffold66G22355 Striga asiatica HOM05D006326 ORTHO05D007589 2.4e-31 141.0 168 51.8
BcaC07g40122 Brassica carinata HOM05D006326 ORTHO05D007589 4.2e-31 140.2 492 38.6
arahy.Tifrunner.gnm1.ann1.Z1KKER Arachis hypogaea HOM05D006326 ORTHO05D007589 5.4e-31 139.8 515 32.4
BcaC07g39981 Brassica carinata HOM05D006326 ORTHO05D007589 5.4e-31 139.8 290 38.6
arahy.Tifrunner.gnm1.ann1.0NJ1V1 Arachis hypogaea HOM05D006326 ORTHO05D007589 7.1e-31 139.4 508 32.7
HanXRQChr15g0491141 Helianthus annuus HOM05D006326 ORTHO05D007589 9.3e-31 139.0 254 42.9
TWI74G0746 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 1.2e-30 138.7 463 33.3
Carub.0005s2347 Capsella rubella HOM05D006326 ORTHO05D007589 1.3e-29 135.2 505 31.3
Cc06_g19610 Coffea canephora HOM05D006326 ORTHO05D007589 1.3e-29 135.2 479 38.0
SGA_v2.0_scaffold1000G53781 Striga asiatica HOM05D006326 ORTHO05D007589 3.9e-29 133.7 317 37.2
Mapoly0069s0088 Marchantia polymorpha HOM05D006326 ORTHO05D007589 1.9e-28 131.3 259 41.7
Ciclev10011438m.g Citrus clementina HOM05D006326 ORTHO05D007589 4.3e-28 130.2 488 36.1
AL5G38090 Arabidopsis lyrata HOM05D006326 ORTHO05D007589 9.6e-28 129.0 499 33.9
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 1.6e-27 128.3 491 30.5
HPP92_019182 Vanilla planifolia HOM05D006326 ORTHO05D007589 1.6e-27 128.3 538 29.9
CDE04G2458 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 3.7e-27 127.1 247 39.3
Migut.J01646 Erythranthe guttata HOM05D006326 ORTHO05D007589 3.1e-26 124.0 439 30.8
Pp3c14_4840 Physcomitrium patens HOM05D006326 ORTHO05D007589 4.0e-26 123.6 192 46.4
Prupe.7G034100 Prunus persica HOM05D006326 ORTHO05D007589 2.6e-25 120.9 526 30.4
SEGI_11590 Sequoiadendron giganteum HOM05D006326 ORTHO05D007589 7.6e-25 119.4 193 45.1
Glyma.02G166100 Glycine max HOM05D006326 ORTHO05D007589 1.0e-24 119.0 463 29.8
CiPaw.10G040500 Carya illinoinensis HOM05D006326 ORTHO05D007589 2.9e-24 117.5 481 32.6
TWI53G1954 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 2.9e-24 117.5 475 31.4
AagrBONN_evm.TU.Sc2ySwM_344.979 Anthoceros agrestis HOM05D006326 ORTHO05D007589 1.1e-23 115.5 188 44.1
TPR.G7607 Trifolium pratense HOM05D006326 ORTHO05D007589 3.2e-23 114.0 499 37.3
MELO3C019097.2 Cucumis melo HOM05D006326 ORTHO05D007589 2.7e-22 110.9 470 30.2
Gohir.A09G118300 Gossypium hirsutum HOM05D006326 ORTHO05D007589 2.7e-22 110.9 477 34.0
CANSAT64G1393 Cannabis sativa HOM05D006326 ORTHO05D007589 1.8e-21 108.2 474 30.6
Dinv01681 Davidia involucrata HOM05D006326 ORTHO05D007589 1.8e-21 108.2 387 32.8
FAN24G3485 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.9e-20 104.8 472 29.4
Pp3c1_21670 Physcomitrium patens HOM05D006326 ORTHO05D007589 1.6e-19 101.7 117 52.1
Thhalv10005957m.g Eutrema salsugineum HOM05D006326 ORTHO05D007589 1.4e-18 98.6 487 29.4
SMO351G0508 Selaginella moellendorffii HOM05D006326 ORTHO05D007589 1.8e-18 98.2 117 50.4
Sed0018260 Sechium edule HOM05D006326 ORTHO05D007589 2.4e-18 97.8 355 31.3
Glyma.10G102200 Glycine max HOM05D006326 ORTHO05D007589 1.2e-17 95.5 458 26.6
Actinidia01833 Actinidia chinensis HOM05D006326 ORTHO05D007589 1.5e-17 95.1 70 72.9
Duzib128G1973 Durio zibethinus HOM05D006326 ORTHO05D007589 2.6e-17 94.4 460 28.7
Eucgr.B03116 Eucalyptus grandis HOM05D006326 ORTHO05D007589 1.3e-16 92.0 473 29.2
Medtr0722s0010 Medicago truncatula HOM05D006326 ORTHO05D007589 1.7e-16 91.7 77 66.2
PSO339G2802 Papaver somniferum HOM05D006326 ORTHO05D007589 1.7e-16 91.7 481 30.4
CBR_g50470 Chara braunii HOM05D006326 ORTHO05D007589 2.9e-16 90.9 135 47.4
THA.LOC104815890 Tarenaya hassleriana HOM05D006326 ORTHO05D007589 2.1e-14 84.7 462 33.1
PSO384G3095 Papaver somniferum HOM05D006326 ORTHO05D007589 4.6e-14 83.6 471 27.2
A09p49570 Brassica napus HOM05D006326 ORTHO05D007589 2.3e-13 81.3 275 29.5
BraA09t40410Z Brassica rapa HOM05D006326 ORTHO05D007589 2.3e-13 81.3 275 29.5
CSS0038712 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 1.9e-12 78.2 297 35.7
CSS0022371 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 4.1e-10 70.5 63 57.1
Nn7g36809 Nelumbo nucifera HOM05D006326 ORTHO05D007589 1.0e-08 65.9 438 26.9
Hma1.2p1_0975F.1_g243130 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 2.2e-08 64.7 304 28.6
Hma1.2p1_0975F.1_g243140 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 2.2e-08 64.7 301 28.9
Zm00001eb185630 Zea mays HOM05D006326 ORTHO05D007589 1.9e-07 61.6 305 27.9
SGA_v2.0_scaffold66G22360 Striga asiatica HOM05D006326 ORTHO05D007589 3.6e-06 57.4 90 45.6
Mapoly0021s0060 Marchantia polymorpha HOM05D006326 ORTHO05D007589 4.6e-06 57.0 107 37.4


User provided reference genes

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