Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund18896 Selenicereus undatus HOM05D004998 ORTHO05D006104 1.1e-93 346.7 181 100.0
EL10Ac7g16043 Beta vulgaris HOM05D004998 ORTHO05D006104 7.5e-58 227.6 185 71.4
AUR62009547 Chenopodium quinoa HOM05D004998 ORTHO05D006104 2.8e-57 225.7 184 69.6
AUR62001761 Chenopodium quinoa HOM05D004998 ORTHO05D006104 6.3e-57 224.6 184 69.0
Dinv17028 Davidia involucrata HOM05D004998 ORTHO05D006104 9.5e-45 184.1 186 59.1
Dinv42976 Davidia involucrata HOM05D004998 ORTHO05D006104 9.5e-45 184.1 186 59.1
Dinv43123 Davidia involucrata HOM05D004998 ORTHO05D006104 9.5e-45 184.1 186 59.1
Ah.08g219770 Amaranthus hybridus HOM05D004998 ORTHO05D006104 1.2e-44 183.7 196 60.7
Ciclev10029345m.g Citrus clementina HOM05D004998 ORTHO05D006104 2.3e-43 179.5 180 60.6
TAR636G1117 Trochodendron aralioides HOM05D004998 ORTHO05D006104 1.7e-41 173.3 190 55.8
Atru.chr3.3979 Acer truncatum HOM05D004998 ORTHO05D006104 1.2e-39 167.2 186 55.9
GSVIVG01024930001 Vitis vinifera HOM05D004998 ORTHO05D006104 1.2e-39 167.2 185 54.6
Cc01_g13080 Coffea canephora HOM05D004998 ORTHO05D006104 1.7e-38 163.3 189 55.0
CSS0033668 Camellia sinensis var. sinensis HOM05D004998 ORTHO05D006104 3.9e-38 162.2 190 55.3
CSS0032367 Camellia sinensis var. sinensis HOM05D004998 ORTHO05D006104 6.6e-38 161.4 180 55.0
TAR633G0520 Trochodendron aralioides HOM05D004998 ORTHO05D006104 6.6e-38 161.4 187 54.0
TWI75G0636 Tripterygium wilfordii HOM05D004998 ORTHO05D006104 1.1e-37 160.6 189 55.6
Eucgr.B02327 Eucalyptus grandis HOM05D004998 ORTHO05D006104 1.5e-37 160.2 187 53.5
PGR102G0830 Punica granatum HOM05D004998 ORTHO05D006104 2.8e-36 156.0 187 51.3
Actinidia34418 Actinidia chinensis HOM05D004998 ORTHO05D006104 8.0e-36 154.5 183 52.5
Actinidia23927 Actinidia chinensis HOM05D004998 ORTHO05D006104 1.0e-35 154.1 181 53.0
Hma1.2p1_0615F.1_g189810 Hydrangea macrophylla HOM05D004998 ORTHO05D006104 1.8e-35 153.3 187 50.8
Sabra09G0023800 Salix brachista HOM05D004998 ORTHO05D006104 1.8e-35 153.3 175 54.9
Cfa011521 Carpinus fangiana HOM05D004998 ORTHO05D006104 5.2e-35 151.8 185 51.4
CiPaw.14G067400 Carya illinoinensis HOM05D004998 ORTHO05D006104 6.8e-35 151.4 186 52.7
Lj1A149T62 Lonicera japonica HOM05D004998 ORTHO05D006104 8.9e-35 151.0 187 53.5
Potri.009G033400 Populus trichocarpa HOM05D004998 ORTHO05D006104 5.8e-34 148.3 185 53.5
QL01p031100 Quercus lobata HOM05D004998 ORTHO05D006104 1.3e-33 147.1 187 52.4
Rhsim13G0078800 Rhododendron simsii HOM05D004998 ORTHO05D006104 6.4e-33 144.8 190 49.5
Prupe.6G073200 Prunus persica HOM05D004998 ORTHO05D006104 1.9e-32 143.3 185 50.3
Duzib150G0269 Durio zibethinus HOM05D004998 ORTHO05D006104 3.2e-32 142.5 178 52.8
Nn2g11147 Nelumbo nucifera HOM05D004998 ORTHO05D006104 3.2e-32 142.5 190 48.4
SGA_v2.0_scaffold41G15739 Striga asiatica HOM05D004998 ORTHO05D006104 3.2e-32 142.5 190 50.5
SalBow3G1756 Salvia bowleyana HOM05D004998 ORTHO05D006104 5.4e-32 141.7 186 45.7
Thecc.09G318900 Theobroma cacao HOM05D004998 ORTHO05D006104 2.0e-31 139.8 176 48.3
FvH4_3g36750 Fragaria vesca HOM05D004998 ORTHO05D006104 2.7e-31 139.4 188 50.0
HanXRQChr07g0197281 Helianthus annuus HOM05D004998 ORTHO05D006104 2.7e-31 139.4 180 49.4
Migut.D02075 Erythranthe guttata HOM05D004998 ORTHO05D006104 3.5e-31 139.0 184 48.4
vmacro03047 Vaccinium macrocarpon HOM05D004998 ORTHO05D006104 4.6e-31 138.7 190 47.4
FAN11G2014 Fragaria x ananassa HOM05D004998 ORTHO05D006104 6.0e-31 138.3 187 50.3
MBI14_g12121_MAGBIO Magnolia biondii HOM05D004998 ORTHO05D006104 6.0e-31 138.3 190 50.0
THA.LOC104810769 Tarenaya hassleriana HOM05D004998 ORTHO05D006104 7.8e-31 137.9 185 48.1
MD03G1088800 Malus domestica HOM05D004998 ORTHO05D006104 1.0e-30 137.5 186 48.4
TWI79G0863 Tripterygium wilfordii HOM05D004998 ORTHO05D006104 1.0e-30 137.5 186 49.5
ClCG02G020020 Citrullus lanatus HOM05D004998 ORTHO05D006104 2.3e-30 136.3 187 49.2
CiPaw.13G091800 Carya illinoinensis HOM05D004998 ORTHO05D006104 3.9e-30 135.6 171 49.7
Duzib168G2185 Durio zibethinus HOM05D004998 ORTHO05D006104 3.9e-30 135.6 176 48.9
DCAR_005961 Daucus carota HOM05D004998 ORTHO05D006104 8.6e-30 134.4 189 46.6
Peaxi162Scf00092g01117 Petunia axillaris HOM05D004998 ORTHO05D006104 1.1e-29 134.0 189 47.6
MD11G1097800 Malus domestica HOM05D004998 ORTHO05D006104 1.5e-29 133.7 186 49.5
CsaV3_6G016720 Cucumis sativus L. HOM05D004998 ORTHO05D006104 2.5e-29 132.9 186 48.4
FAN21G1380 Fragaria x ananassa HOM05D004998 ORTHO05D006104 3.3e-29 132.5 192 49.0
Sc12g0001370 Simmondsia chinensis HOM05D004998 ORTHO05D006104 3.3e-29 132.5 131 58.0
Lsat_1_v5_gn_9_23841 Lactuca sativa HOM05D004998 ORTHO05D006104 7.3e-29 131.3 185 49.2
Nitab4.5_0000272g0050 Nicotiana tabacum HOM05D004998 ORTHO05D006104 7.3e-29 131.3 202 44.1
Phvul.L006843 Phaseolus vulgaris HOM05D004998 ORTHO05D006104 7.3e-29 131.3 181 48.1
C03p13690 Brassica napus HOM05D004998 ORTHO05D006104 9.5e-29 131.0 184 46.7
PGSC0003DMG400002149 Solanum tuberosum HOM05D004998 ORTHO05D006104 9.5e-29 131.0 191 48.2
arahy.Tifrunner.gnm1.ann1.AD2TJP Arachis hypogaea HOM05D004998 ORTHO05D006104 1.2e-28 130.6 182 47.8
arahy.Tifrunner.gnm1.ann1.JSTV8M Arachis hypogaea HOM05D004998 ORTHO05D006104 1.2e-28 130.6 182 48.4
Manes.01G171600 Manihot esculenta HOM05D004998 ORTHO05D006104 1.2e-28 130.6 187 50.8
CARHR285830 Cardamine hirsuta HOM05D004998 ORTHO05D006104 1.6e-28 130.2 182 45.6
Gohir.A05G094300 Gossypium hirsutum HOM05D004998 ORTHO05D006104 1.6e-28 130.2 175 49.1
Aqoxy1G00915 Aquilegia oxysepala HOM05D004998 ORTHO05D006104 4.7e-28 128.6 188 46.8
COL.COLO4_18543 Corchorus olitorius HOM05D004998 ORTHO05D006104 8.0e-28 127.9 179 46.9
RcHm_v2.0_Chr5g0065711 Rosa chinensis HOM05D004998 ORTHO05D006104 8.0e-28 127.9 187 47.6
AL8G35930 Arabidopsis lyrata HOM05D004998 ORTHO05D006104 1.4e-27 127.1 182 44.5
Glyma.15G036800 Glycine max HOM05D004998 ORTHO05D006104 1.4e-27 127.1 188 47.9
Nn2g13381 Nelumbo nucifera HOM05D004998 ORTHO05D006104 1.4e-27 127.1 184 46.7
Sopen06g001560 Solanum pennellii HOM05D004998 ORTHO05D006104 2.3e-27 126.3 190 46.8
VMungo1080G1028 Vigna mungo HOM05D004998 ORTHO05D006104 2.3e-27 126.3 187 47.1
Solyc06g005600.3 Solanum lycopersicum HOM05D004998 ORTHO05D006104 3.1e-27 125.9 190 46.8
Sp6g21150 Schrenkiella parvula HOM05D004998 ORTHO05D006104 4.0e-27 125.6 181 45.3
ATR0559G067 Amborella trichopoda HOM05D004998 ORTHO05D006104 5.2e-27 125.2 181 43.6
Carub.0008s2013 Capsella rubella HOM05D004998 ORTHO05D006104 5.2e-27 125.2 181 45.9
Gohir.D05G094800 Gossypium hirsutum HOM05D004998 ORTHO05D006104 6.8e-27 124.8 175 48.0
Gorai.009G098000 Gossypium raimondii HOM05D004998 ORTHO05D006104 6.8e-27 124.8 175 48.0
Os01g0144600 Oryza sativa ssp. japonica HOM05D004998 ORTHO05D006104 6.8e-27 124.8 199 46.2
MELO3C025903.2 Cucumis melo HOM05D004998 ORTHO05D006104 1.2e-26 124.0 187 46.0
FAN16G3214 Fragaria x ananassa HOM05D004998 ORTHO05D006104 1.5e-26 123.6 205 45.4
CANSAT54G1321 Cannabis sativa HOM05D004998 ORTHO05D006104 2.0e-26 123.2 182 45.6
Lj3g0014072 Lotus japonicus HOM05D004998 ORTHO05D006104 2.6e-26 122.9 178 48.3
Lalb_Chr03g0026531 Lupinus albus HOM05D004998 ORTHO05D006104 2.6e-26 122.9 189 43.9
Glyma.13G337700 Glycine max HOM05D004998 ORTHO05D006104 3.4e-26 122.5 189 46.6
HanXRQChr12g0374241 Helianthus annuus HOM05D004998 ORTHO05D006104 4.4e-26 122.1 181 48.1
AT5G59460 Arabidopsis thaliana HOM05D004998 ORTHO05D006104 5.8e-26 121.7 180 43.9
Haze_24126 Corylus avellana HOM05D004998 ORTHO05D006104 1.3e-25 120.6 98 67.3
Gohir.D03G123600 Gossypium hirsutum HOM05D004998 ORTHO05D006104 1.3e-25 120.6 171 49.1
ECA247G2861 Erigeron canadensis HOM05D004998 ORTHO05D006104 2.9e-25 119.4 187 46.0
BcaC03g14012 Brassica carinata HOM05D004998 ORTHO05D006104 6.4e-25 118.2 180 43.9
C02p12480 Brassica napus HOM05D004998 ORTHO05D006104 6.4e-25 118.2 180 43.9
BolC2t07348H Brassica oleracea HOM05D004998 ORTHO05D006104 6.4e-25 118.2 180 43.9
Medtr2g097480 Medicago truncatula HOM05D004998 ORTHO05D006104 6.4e-25 118.2 179 45.8
BraA02t05793Z Brassica rapa HOM05D004998 ORTHO05D006104 1.1e-24 117.5 180 43.9
Sed0008555 Sechium edule HOM05D004998 ORTHO05D006104 1.1e-24 117.5 185 45.9
CDE02G2808 Ceratophyllum demersum HOM05D004998 ORTHO05D006104 1.9e-24 116.7 177 43.5
Gohir.A03G043800 Gossypium hirsutum HOM05D004998 ORTHO05D006104 1.9e-24 116.7 171 49.1
TPR.G5593 Trifolium pratense HOM05D004998 ORTHO05D006104 2.4e-24 116.3 190 45.3
Gorai.003G130300 Gossypium raimondii HOM05D004998 ORTHO05D006104 3.2e-24 115.9 171 48.0
Thhalv10014846m.g Eutrema salsugineum HOM05D004998 ORTHO05D006104 4.1e-24 115.5 181 44.2
BcaB05g22508 Brassica carinata HOM05D004998 ORTHO05D006104 5.4e-24 115.2 185 42.7
MSTRG.18567 Avicennia marina HOM05D004998 ORTHO05D006104 2.1e-23 113.2 183 45.4
Psat5g285160 Pisum sativum HOM05D004998 ORTHO05D006104 2.1e-23 113.2 175 43.4
Aa31LG4G15620 Aethionema arabicum HOM05D004998 ORTHO05D006104 3.5e-23 112.5 179 44.1
PSO339G2709 Papaver somniferum HOM05D004998 ORTHO05D006104 7.8e-23 111.3 190 43.7
A02p07120 Brassica napus HOM05D004998 ORTHO05D006104 1.7e-22 110.2 179 42.5
Oeu053883.1 Olea europaea HOM05D004998 ORTHO05D006104 2.3e-22 109.8 169 46.2
BcaB08g36256 Brassica carinata HOM05D004998 ORTHO05D006104 5.1e-22 108.6 185 44.3
Dinv06259 Davidia involucrata HOM05D004998 ORTHO05D006104 7.3e-21 104.8 104 60.6
BraA10t43749Z Brassica rapa HOM05D004998 ORTHO05D006104 9.5e-21 104.4 158 41.1
A10p16680 Brassica napus HOM05D004998 ORTHO05D006104 2.8e-20 102.8 158 41.1
Peaxi162Scf00122g01415 Petunia axillaris HOM05D004998 ORTHO05D006104 3.6e-20 102.4 189 40.7
CDE08G1537 Ceratophyllum demersum HOM05D004998 ORTHO05D006104 8.1e-20 101.3 140 47.1
Cpa.g.sc81.121 Carica papaya HOM05D004998 ORTHO05D006104 1.8e-19 100.1 75 66.7
Thhalv10002686m.g Eutrema salsugineum HOM05D004998 ORTHO05D006104 3.1e-19 99.4 187 42.2
Nitab4.5_0006945g0010 Nicotiana tabacum HOM05D004998 ORTHO05D006104 1.2e-18 97.4 187 39.6
Aa31LG1G11810 Aethionema arabicum HOM05D000959 ORTHO05D000775 2.0e-18 96.7 169 40.8
HPP92_006623 Vanilla planifolia HOM05D004998 ORTHO05D006104 4.4e-18 95.5 221 35.7
Zm00001eb124480 Zea mays HOM05D004998 ORTHO05D006104 6.4e-17 91.7 82 59.8
C09p51870 Brassica napus HOM05D004998 ORTHO05D006104 8.3e-17 91.3 149 43.6
BolC3t13819H Brassica oleracea HOM05D004998 ORTHO05D006104 2.4e-16 89.7 151 45.7
Nitab4.5_0007132g0030 Nicotiana tabacum HOM05D004998 ORTHO05D006104 1.6e-15 87.0 174 37.4
C03p13710 Brassica napus HOM05D004998 ORTHO05D006104 5.1e-14 82.0 136 42.6
BolC9t58049H Brassica oleracea HOM05D004998 ORTHO05D006104 1.9e-13 80.1 173 36.4
FvH4_3g41460 Fragaria vesca HOM05D004998 ORTHO05D006104 2.5e-13 79.7 176 38.1
BcaC04g19766 Brassica carinata HOM05D004998 ORTHO05D006104 7.3e-13 78.2 163 37.4
FAN11G1834 Fragaria x ananassa HOM05D004998 ORTHO05D006104 9.6e-13 77.8 176 37.5
BcaB08g36255 Brassica carinata HOM05D004998 ORTHO05D006104 8.9e-11 71.2 159 37.1
BcaC01g06521 Brassica carinata HOM05D004998 ORTHO05D006104 1.3e-09 67.4 176 34.7
FAN21G1361 Fragaria x ananassa HOM05D004998 ORTHO05D006104 1.7e-09 67.0 176 36.4
BcaC09g48433 Brassica carinata HOM05D004998 ORTHO05D006104 2.2e-09 66.6 210 31.0
BcaB01g04577 Brassica carinata HOM05D004998 ORTHO05D006104 2.9e-09 66.2 183 36.1
FAN25G2664 Fragaria x ananassa HOM05D004998 ORTHO05D006104 1.1e-08 64.3 176 35.8
unitig_37.g12674 Utricularia gibba HOM05D004998 ORTHO05D006104 2.4e-08 63.2 140 35.0
Mapoly0094s0023 Marchantia polymorpha HOM05D004998 ORTHO05D006104 4.2e-08 62.4 99 40.4
Oeu002429.1 Olea europaea HOM05D004998 ORTHO05D006104 2.7e-07 59.7 54 61.1
CSS0021101 Camellia sinensis var. sinensis HOM05D004998 ORTHO05D006104 7.8e-07 58.2 63 50.8
SEGI_30466 Sequoiadendron giganteum HOM05D004998 ORTHO05D006104 1.7e-06 57.0 146 30.1


User provided reference genes

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