Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund18892 Selenicereus undatus HOM05D007264 ORTHO05D008639 1.4e-91 339.7 193 100.0
EL10Ac7g16055 Beta vulgaris HOM05D007264 ORTHO05D008639 8.9e-25 117.9 192 52.1
AUR62020022 Chenopodium quinoa HOM05D007264 ORTHO05D008639 1.4e-22 110.5 107 68.2
Haze_24148 Corylus avellana HOM05D007264 ORTHO05D008639 1.7e-20 103.6 168 51.2
Cfa011538 Carpinus fangiana HOM05D007264 ORTHO05D008639 2.3e-20 103.2 167 49.7
PGR119G0519 Punica granatum HOM05D007264 ORTHO05D008639 2.3e-20 103.2 189 48.7
QL01p030632 Quercus lobata HOM05D007264 ORTHO05D008639 5.0e-20 102.1 96 71.9
Thecc.09G317100 Theobroma cacao HOM05D007264 ORTHO05D008639 1.5e-19 100.5 178 48.9
Sed0006840 Sechium edule HOM05D007264 ORTHO05D008639 1.9e-19 100.1 158 50.6
AUR62001749 Chenopodium quinoa HOM05D007264 ORTHO05D008639 3.3e-19 99.4 192 48.4
MELO3C025896.2 Cucumis melo HOM05D007264 ORTHO05D008639 3.3e-19 99.4 160 48.1
Peaxi162Scf00038g02028 Petunia axillaris HOM05D007264 ORTHO05D008639 5.6e-19 98.6 158 46.2
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea HOM05D007264 ORTHO05D008639 9.5e-19 97.8 168 50.6
Gohir.D07G104200 Gossypium hirsutum HOM05D007264 ORTHO05D008639 9.5e-19 97.8 181 48.1
Nn8g40679 Nelumbo nucifera HOM05D007264 ORTHO05D008639 9.5e-19 97.8 181 48.6
Eucgr.J02035 Eucalyptus grandis HOM05D007264 ORTHO05D008639 1.2e-18 97.4 172 48.3
Gorai.001G112100 Gossypium raimondii HOM05D007264 ORTHO05D008639 1.2e-18 97.4 181 47.0
Medtr2g097680 Medicago truncatula HOM05D007264 ORTHO05D008639 1.2e-18 97.4 193 44.0
MD11G1096000 Malus domestica HOM05D007264 ORTHO05D008639 1.6e-18 97.1 101 64.4
RcHm_v2.0_Chr5g0066101 Rosa chinensis HOM05D007264 ORTHO05D008639 2.1e-18 96.7 102 62.7
Medtr1g071380 Medicago truncatula HOM05D007264 ORTHO05D008639 2.8e-18 96.3 194 44.8
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea HOM05D007264 ORTHO05D008639 4.7e-18 95.5 168 49.4
Prupe.6G071500 Prunus persica HOM05D007264 ORTHO05D008639 4.7e-18 95.5 97 64.9
Solyc05g009300.1 Solanum lycopersicum HOM05D007264 ORTHO05D008639 4.7e-18 95.5 93 66.7
MD03G1086900 Malus domestica HOM05D007264 ORTHO05D008639 6.2e-18 95.1 173 48.0
CsaV3_6G016660 Cucumis sativus L. HOM05D007264 ORTHO05D008639 8.1e-18 94.7 166 44.6
ATR0559G356 Amborella trichopoda HOM05D007264 ORTHO05D008639 1.1e-17 94.4 100 63.0
Nn2g13417 Nelumbo nucifera HOM05D007264 ORTHO05D008639 1.1e-17 94.4 93 67.7
AL41U10070 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 1.4e-17 94.0 157 43.9
vmacro03038 Vaccinium macrocarpon HOM05D007264 ORTHO05D008639 1.4e-17 94.0 188 46.8
Migut.D00885 Erythranthe guttata HOM05D007264 ORTHO05D008639 1.8e-17 93.6 190 43.7
Sopen05g005050 Solanum pennellii HOM05D007264 ORTHO05D008639 1.8e-17 93.6 169 47.3
CSS0034107 Camellia sinensis var. sinensis HOM05D007264 ORTHO05D008639 2.3e-17 93.2 165 48.5
AL4G23740 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 3.1e-17 92.8 157 42.7
PSO339G5862 Papaver somniferum HOM05D007264 ORTHO05D008639 3.1e-17 92.8 177 45.2
Lalb_Chr24g0394031 Lupinus albus HOM05D007264 ORTHO05D008639 5.2e-17 92.0 193 46.1
MBI14_g08028_MAGBIO Magnolia biondii HOM05D007264 ORTHO05D008639 5.2e-17 92.0 145 49.7
Ah.15g098550 Amaranthus hybridus HOM05D007264 ORTHO05D008639 6.8e-17 91.7 194 45.9
Nitab4.5_0014843g0020 Nicotiana tabacum HOM05D007264 ORTHO05D008639 6.8e-17 91.7 109 55.0
Gohir.A07G099900 Gossypium hirsutum HOM05D007264 ORTHO05D008639 8.9e-17 91.3 180 46.1
Lsat_1_v5_gn_5_169441 Lactuca sativa HOM05D007264 ORTHO05D008639 8.9e-17 91.3 170 46.5
PGSC0003DMG400014567 Solanum tuberosum HOM05D007264 ORTHO05D008639 8.9e-17 91.3 150 49.3
FvH4_3g36880 Fragaria vesca HOM05D007264 ORTHO05D008639 1.2e-16 90.9 108 53.7
FAN11G3606 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.2e-16 90.9 108 53.7
Nitab4.5_0006942g0010 Nicotiana tabacum HOM05D007264 ORTHO05D008639 1.5e-16 90.5 169 43.2
ECA248G2900 Erigeron canadensis HOM05D007264 ORTHO05D008639 2.6e-16 89.7 160 48.8
CiPaw.14G066400 Carya illinoinensis HOM05D007264 ORTHO05D008639 4.4e-16 89.0 91 60.4
Cc01_g13240 Coffea canephora HOM05D007264 ORTHO05D008639 4.4e-16 89.0 152 48.7
TWI79G0692 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 7.5e-16 88.2 179 45.3
MSTRG.11098 Avicennia marina HOM05D007264 ORTHO05D008639 9.8e-16 87.8 99 60.6
Lj3g0004900 Lotus japonicus HOM05D007264 ORTHO05D008639 1.3e-15 87.4 181 40.9
AT2G29180 Arabidopsis thaliana HOM05D007264 ORTHO05D008639 2.2e-15 86.7 109 55.0
BcaB01g03133 Brassica carinata HOM05D007264 ORTHO05D008639 2.9e-15 86.3 139 46.0
CARHR122460 Cardamine hirsuta HOM05D007264 ORTHO05D008639 2.9e-15 86.3 106 53.8
Cpa.g.sc81.107 Carica papaya HOM05D007264 ORTHO05D008639 4.9e-15 85.5 164 47.0
FAN21G2492 Fragaria x ananassa HOM05D007264 ORTHO05D008639 6.4e-15 85.1 180 42.8
Manes.01G170100 Manihot esculenta HOM05D007264 ORTHO05D008639 6.4e-15 85.1 102 53.9
Carub.0004s1020 Capsella rubella HOM05D007264 ORTHO05D008639 1.4e-14 84.0 107 53.3
BcaC03g18293 Brassica carinata HOM05D007264 ORTHO05D008639 1.9e-14 83.6 83 61.4
C02p63690 Brassica napus HOM05D007264 ORTHO05D008639 1.9e-14 83.6 83 61.4
BolC2t12437H Brassica oleracea HOM05D007264 ORTHO05D008639 1.9e-14 83.6 83 61.4
FAN25G3374 Fragaria x ananassa HOM05D007264 ORTHO05D008639 3.2e-14 82.8 180 42.2
ClCG02G019960 Citrullus lanatus HOM05D007264 ORTHO05D008639 7.1e-14 81.6 99 58.6
PSO513G0105 Papaver somniferum HOM05D007264 ORTHO05D008639 9.2e-14 81.3 159 46.5
Aa31LG5G7130 Aethionema arabicum HOM05D007264 ORTHO05D008639 1.2e-13 80.9 72 70.8
DCAR_005951 Daucus carota HOM05D007264 ORTHO05D008639 1.6e-13 80.5 184 40.8
A02p43580 Brassica napus HOM05D007264 ORTHO05D008639 2.1e-13 80.1 80 61.2
Ciclev10029397m.g Citrus clementina HOM05D007264 ORTHO05D008639 2.1e-13 80.1 191 42.9
Dinv17036 Davidia involucrata HOM05D007264 ORTHO05D008639 2.1e-13 80.1 193 42.5
Dinv42982 Davidia involucrata HOM05D007264 ORTHO05D008639 2.1e-13 80.1 193 42.5
Dinv43117 Davidia involucrata HOM05D007264 ORTHO05D008639 2.1e-13 80.1 193 42.5
Actinidia33776 Actinidia chinensis HOM05D007264 ORTHO05D008639 2.7e-13 79.7 184 44.6
BraA02t09285Z Brassica rapa HOM05D007264 ORTHO05D008639 2.7e-13 79.7 81 60.5
Potri.001G243500 Populus trichocarpa HOM05D007264 ORTHO05D008639 4.6e-13 79.0 91 54.9
Sc25g0001650 Simmondsia chinensis HOM05D007264 ORTHO05D008639 4.6e-13 79.0 164 43.3
Oeu002437.1 Olea europaea HOM05D007264 ORTHO05D008639 6.0e-13 78.6 192 41.7
Sp4g11990 Schrenkiella parvula HOM05D007264 ORTHO05D008639 7.8e-13 78.2 107 50.5
TAR623G1366 Trochodendron aralioides HOM05D007264 ORTHO05D008639 1.0e-12 77.8 178 41.6
COL.COLO4_18565 Corchorus olitorius HOM05D007264 ORTHO05D008639 1.3e-12 77.4 194 40.2
Oeu002436.1 Olea europaea HOM05D007264 ORTHO05D008639 1.7e-12 77.0 192 40.6
Aqoxy1G00887 Aquilegia oxysepala HOM05D007264 ORTHO05D008639 2.3e-12 76.6 163 45.4
THA.LOC104800684 Tarenaya hassleriana HOM05D007264 ORTHO05D008639 2.3e-12 76.6 72 69.4
HanXRQChr01g0010441 Helianthus annuus HOM05D007264 ORTHO05D008639 3.0e-12 76.3 157 40.1
TAR560G0010 Trochodendron aralioides HOM05D007264 ORTHO05D008639 3.9e-12 75.9 187 41.7
Glyma.15G035800 Glycine max HOM05D007264 ORTHO05D008639 1.1e-11 74.3 156 41.7
GSVIVG01024917001 Vitis vinifera HOM05D007264 ORTHO05D008639 1.1e-11 74.3 197 41.6
Duzib168G0085 Durio zibethinus HOM05D007264 ORTHO05D008639 1.5e-11 73.9 172 40.7
Phvul.L007743 Phaseolus vulgaris HOM05D007264 ORTHO05D008639 1.5e-11 73.9 195 37.9
TPR.G6833 Trifolium pratense HOM05D007264 ORTHO05D008639 1.5e-11 73.9 202 41.6
Glyma.13G338500 Glycine max HOM05D007264 ORTHO05D008639 7.3e-11 71.6 144 40.3
VMungo1080G0594 Vigna mungo HOM05D007264 ORTHO05D008639 7.3e-11 71.6 194 37.6
Psat5g287960 Pisum sativum HOM05D007264 ORTHO05D008639 2.1e-10 70.1 189 40.2
Sabra16G0147800 Salix brachista HOM05D007264 ORTHO05D008639 3.6e-10 69.3 207 38.2
CDE04G3075 Ceratophyllum demersum HOM05D007264 ORTHO05D008639 4.7e-10 68.9 160 42.5
SGA_v2.0_scaffold111G31536 Striga asiatica HOM05D007264 ORTHO05D008639 3.1e-09 66.2 212 39.2
Atru.chr3.3962 Acer truncatum HOM05D007264 ORTHO05D008639 4.9e-07 58.9 201 38.3
Os03g0271500 Oryza sativa ssp. japonica HOM05D016300 ORTHO05D008639 9.2e-06 54.7 102 40.2


User provided reference genes

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