Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund18777 Selenicereus undatus HOM05D007535 ORTHO05D008520 1.4e-207 726.5 495 100.0
EL10Ac7g16124 Beta vulgaris HOM05D007535 ORTHO05D008520 2.6e-84 317.0 501 58.3
AUR62001527 Chenopodium quinoa HOM05D007535 ORTHO05D008520 5.3e-82 309.3 515 60.0
Thecc.09G278200 Theobroma cacao HOM05D007535 ORTHO05D008520 4.1e-58 229.9 500 49.6
Sc12g0004670 Simmondsia chinensis HOM05D007535 ORTHO05D008520 3.5e-57 226.9 496 56.7
Sc12g0004620 Simmondsia chinensis HOM05D007535 ORTHO05D008520 7.8e-57 225.7 495 49.9
vmacro03328 Vaccinium macrocarpon HOM05D007535 ORTHO05D008520 4.3e-55 219.9 516 46.3
CSS0035480 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 6.8e-53 212.6 379 39.6
Rhsim13G0113500 Rhododendron simsii HOM05D000001 ORTHO05D000003 1.2e-52 211.8 533 42.2
Dinv08923 Davidia involucrata HOM05D007535 ORTHO05D008520 1.4e-50 204.9 506 47.2
Actinidia07260 Actinidia chinensis HOM05D007535 ORTHO05D008520 1.1e-47 195.3 515 53.0
Manes.04G001100 Manihot esculenta HOM05D007535 ORTHO05D008520 1.5e-47 194.9 511 52.1
Aqoxy4G02717 Aquilegia oxysepala HOM05D007535 ORTHO05D008520 9.8e-44 182.2 496 45.4
MELO3C025588.2 Cucumis melo HOM05D007535 ORTHO05D008520 1.3e-43 181.8 355 36.6
Cpa.g.sc195.29 Carica papaya HOM05D007535 ORTHO05D008520 2.2e-43 181.0 359 37.0
Hma1.2p1_2164F.1_g315740 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 2.2e-43 181.0 333 39.9
Lalb_Chr24g0393491 Lupinus albus HOM05D007535 ORTHO05D008520 2.1e-41 174.5 359 36.2
Haze_23344 Corylus avellana HOM05D007535 ORTHO05D008520 2.7e-41 174.1 358 37.7
Prupe.6G137100 Prunus persica HOM05D007535 ORTHO05D008520 4.6e-41 173.3 502 47.0
arahy.Tifrunner.gnm1.ann1.TGP3GH Arachis hypogaea HOM05D007535 ORTHO05D008520 1.2e-38 165.2 511 47.2
Gohir.A08G006800 Gossypium hirsutum HOM05D007535 ORTHO05D008520 1.2e-38 165.2 500 47.6
AUR62020256 Chenopodium quinoa HOM05D007535 ORTHO05D008520 1.6e-38 164.9 273 65.9
Gorai.004G011300 Gossypium raimondii HOM05D007535 ORTHO05D008520 2.8e-38 164.1 495 46.3
PGSC0003DMG400026347 Solanum tuberosum HOM05D007535 ORTHO05D008520 4.7e-38 163.3 519 44.5
Lj3g0000707 Lotus japonicus HOM05D007535 ORTHO05D008520 8.1e-38 162.5 503 49.5
Duzib150G0908 Durio zibethinus HOM05D007535 ORTHO05D008520 1.8e-37 161.4 220 43.6
Gohir.D08G017000 Gossypium hirsutum HOM05D007535 ORTHO05D008520 2.3e-37 161.0 503 47.3
Solyc11g068690.2 Solanum lycopersicum HOM05D007535 ORTHO05D008520 2.3e-37 161.0 525 43.6
Sopen11g027410 Solanum pennellii HOM05D007535 ORTHO05D008520 1.2e-36 158.7 521 43.8
ECA238G4833 Erigeron canadensis HOM05D007535 ORTHO05D008520 2.0e-36 157.9 306 59.8
Nitab4.5_0008177g0030 Nicotiana tabacum HOM05D007535 ORTHO05D008520 2.0e-36 157.9 496 44.8
MD03G1150100 Malus domestica HOM05D007535 ORTHO05D008520 4.4e-36 156.8 504 46.4
Hma1.2p1_2164F.1_g315730 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 2.2e-35 154.5 316 38.3
Actinidia24230 Actinidia chinensis HOM05D007535 ORTHO05D008520 4.1e-34 150.2 144 59.0
Psat5g257880 Pisum sativum HOM05D007535 ORTHO05D008520 1.6e-33 148.3 499 42.1
Nn6g34805 Nelumbo nucifera HOM05D007535 ORTHO05D008520 2.7e-33 147.5 362 34.3
Sabra04G0134300 Salix brachista HOM05D001716 ORTHO05D004234 2.7e-33 147.5 505 46.9
HPP92_011495 Vanilla planifolia HOM05D007535 ORTHO05D008520 6.0e-33 146.4 498 47.2
Cc00_g20950 Coffea canephora HOM05D007535 ORTHO05D008520 1.3e-32 145.2 495 48.1
Peaxi162Scf00224g00216 Petunia axillaris HOM05D007535 ORTHO05D008520 3.9e-32 143.7 515 42.7
Cfa009985 Carpinus fangiana HOM05D007535 ORTHO05D008520 4.3e-31 140.2 499 47.5
CAN.G745.17 Capsicum annuum HOM05D007535 ORTHO05D008520 7.3e-31 139.4 502 43.4
Ciclev10028368m.g Citrus clementina HOM05D007535 ORTHO05D008520 2.8e-30 137.5 500 47.2
DCAR_024892 Daucus carota HOM05D007535 ORTHO05D008520 2.8e-30 137.5 508 42.1
GSVIVG01036079001 Vitis vinifera HOM05D007535 ORTHO05D008520 2.8e-30 137.5 498 45.0
Nitab4.5_0000731g0020 Nicotiana tabacum HOM05D007535 ORTHO05D008520 3.6e-30 137.1 495 43.8
TAR633G1755 Trochodendron aralioides HOM05D007535 ORTHO05D008520 6.2e-30 136.3 500 45.8
RcHm_v2.0_Chr5g0046091 Rosa chinensis HOM05D007535 ORTHO05D008520 1.1e-29 135.6 495 44.4
QL01p011831 Quercus lobata HOM05D007535 ORTHO05D008520 1.8e-29 134.8 556 43.9
Ciclev10029981m.g Citrus clementina HOM05D007535 ORTHO05D008520 3.4e-28 130.6 361 33.0
SGA_v2.0_scaffold177G39436 Striga asiatica HOM05D007535 ORTHO05D008520 2.9e-27 127.5 508 41.3
FAN16G1906 Fragaria x ananassa HOM05D007535 ORTHO05D008520 6.4e-27 126.3 342 31.6
ClCG01G011770 Citrullus lanatus HOM05D007535 ORTHO05D008520 1.9e-26 124.8 499 43.7
Medtr2g086950 Medicago truncatula HOM05D007535 ORTHO05D008520 3.2e-26 124.0 505 39.6
TWI79G0866 Tripterygium wilfordii HOM05D007535 ORTHO05D008520 3.2e-26 124.0 514 42.8
PSO339G0294 Papaver somniferum HOM05D007535 ORTHO05D008520 5.4e-26 123.2 504 39.7
Lj2A969T70 Lonicera japonica HOM05D007535 ORTHO05D008520 9.2e-26 122.5 290 34.8
PSO384G1635 Papaver somniferum HOM05D007535 ORTHO05D008520 3.5e-25 120.6 495 38.0
VMungo1080G1542 Vigna mungo HOM05D007535 ORTHO05D008520 1.3e-24 118.6 506 40.9
TPR.G4567 Trifolium pratense HOM05D007535 ORTHO05D008520 2.3e-24 117.9 497 41.9
unitig_27.g25117 Utricularia gibba HOM05D007535 ORTHO05D008520 3.9e-24 117.1 497 45.1
Sed0017293 Sechium edule HOM05D007535 ORTHO05D008520 8.7e-24 115.9 505 43.2
FvH4_3g25730 Fragaria vesca HOM05D007535 ORTHO05D008520 1.1e-23 115.5 495 43.6
Glyma.12G186700 Glycine max HOM05D007535 ORTHO05D008520 1.5e-23 115.2 498 41.8
MBI17_g01489_MAGBIO Magnolia biondii HOM05D007535 ORTHO05D008520 5.6e-23 113.2 291 31.3
FAN11G3206 Fragaria x ananassa HOM05D007535 ORTHO05D008520 7.3e-23 112.8 495 43.0
FAN25G3072 Fragaria x ananassa HOM05D007535 ORTHO05D008520 1.2e-22 112.1 494 43.5
Potri.004G199200 Populus trichocarpa HOM05D007535 ORTHO05D008520 4.7e-22 110.2 494 42.1
CsaV3_1G015090 Cucumis sativus L. HOM05D007535 ORTHO05D008520 9.0e-21 105.9 300 32.0
ATR0081G029 Amborella trichopoda HOM05D007535 ORTHO05D008520 1.2e-20 105.5 144 44.4
Ciclev10028316m.g Citrus clementina HOM05D007535 ORTHO05D008520 2.0e-20 104.8 497 44.9
FAN21G0330 Fragaria x ananassa HOM05D007535 ORTHO05D008520 7.6e-20 102.8 499 33.9
Glyma.13G314800 Glycine max HOM05D007535 ORTHO05D008520 3.8e-19 100.5 497 41.2
Atru.chr3.3166 Acer truncatum HOM05D007535 ORTHO05D008520 8.4e-19 99.4 291 32.0
Os01g0966400 Oryza sativa ssp. japonica HOM05D007535 ORTHO05D008520 1.1e-18 99.0 358 29.9
MSTRG.12377 Avicennia marina HOM05D007535 ORTHO05D008520 2.4e-18 97.8 508 41.5
Ca_01647_v3 Cicer arietinum L. HOM05D002184 ORTHO05D002379 7.1e-18 96.3 498 39.0
Migut.N02473 Erythranthe guttata HOM05D007535 ORTHO05D008520 2.7e-17 94.4 494 41.1
CDE02G4009 Ceratophyllum demersum HOM05D007535 ORTHO05D008520 4.6e-17 93.6 292 32.5
PGR119G1786 Punica granatum HOM05D007535 ORTHO05D008520 4.6e-17 93.6 293 33.4
CANSAT54G2250 Cannabis sativa HOM05D007535 ORTHO05D008520 1.0e-16 92.4 497 42.9
arahy.Tifrunner.gnm1.ann1.ETK20Z Arachis hypogaea HOM05D007535 ORTHO05D008520 2.3e-16 91.3 505 41.6
SalBow3G0383 Salvia bowleyana HOM05D007535 ORTHO05D008520 5.1e-16 90.1 496 40.5
Eucgr.J00525 Eucalyptus grandis HOM05D007535 ORTHO05D008520 6.6e-16 89.7 291 28.9
Phvul.005G122000 Phaseolus vulgaris HOM05D007535 ORTHO05D008520 1.6e-14 85.1 497 42.3
Lsat_1_v5_gn_2_34620 Lactuca sativa HOM05D007535 ORTHO05D008520 3.6e-14 84.0 500 36.2
CiPaw.14G097800 Carya illinoinensis HOM05D007535 ORTHO05D008520 3.1e-13 80.9 248 33.1
HanXRQChr14g0433121 Helianthus annuus HOM05D007535 ORTHO05D008520 1.2e-12 79.0 493 37.3
Carub.0006s2006 Capsella rubella HOM05D012474 ORTHO05D008520 4.2e-10 70.5 496 40.5
THA.LOC104810927 Tarenaya hassleriana HOM05D007535 ORTHO05D008520 7.1e-10 69.7 297 26.3
Nitab4.5_0001640g0010 Nicotiana tabacum HOM05D007535 ORTHO05D008520 3.5e-09 67.4 173 32.9
Zm00001eb140080 Zea mays HOM05D007535 ORTHO05D008520 6.0e-09 66.6 370 27.8
FAN25G1573 Fragaria x ananassa HOM05D007535 ORTHO05D008520 7.9e-09 66.2 314 52.5
Oeu024409.1 Olea europaea HOM05D007535 ORTHO05D008520 1.3e-08 65.5 45 71.1
Sp6g22920 Schrenkiella parvula HOM05D012474 ORTHO05D008520 1.3e-08 65.5 290 27.2
C09p54330 Brassica napus HOM05D012474 ORTHO05D008520 3.0e-08 64.3 72 45.8
BcaC04g19565 Brassica carinata HOM05D012474 ORTHO05D008520 6.7e-08 63.2 72 45.8
Hma1.2p1_2164F.1_g315720 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 1.3e-06 58.9 45 64.4
PRCOL_00004573 Prasinoderma coloniale HOM05D007535 ORTHO05D008520 1.3e-06 58.9 178 27.0
BcaB08g36440 Brassica carinata HOM05D012474 ORTHO05D008520 2.8e-06 57.8 286 24.1
CARHR191220 Cardamine hirsuta HOM05D012474 ORTHO05D008520 6.2e-06 56.6 494 40.3


User provided reference genes

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