Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund18776 Selenicereus undatus HOM05D005386 ORTHO05D006981 2.6e-239 831.6 423 100.0
Sc06g0008690 Simmondsia chinensis HOM05D005386 ORTHO05D006981 2.9e-89 333.2 428 47.0
EL10Ac9g22916 Beta vulgaris HOM05D005386 ORTHO05D006981 4.7e-87 325.9 423 47.8
Ah.01g001670 Amaranthus hybridus HOM05D005386 ORTHO05D006981 2.7e-82 310.1 431 45.7
GSVIVG01036080001 Vitis vinifera HOM05D005386 ORTHO05D006981 2.1e-79 300.4 420 43.6
Gohir.D05G082400 Gossypium hirsutum HOM05D005386 ORTHO05D006981 6.2e-79 298.9 424 43.6
Gorai.009G084000 Gossypium raimondii HOM05D005386 ORTHO05D006981 1.4e-78 297.7 424 43.4
COL.COLO4_34005 Corchorus olitorius HOM05D005386 ORTHO05D006981 5.2e-78 295.8 428 43.2
Gohir.A05G079500 Gossypium hirsutum HOM05D005386 ORTHO05D006981 2.6e-77 293.5 424 42.9
Dinv08924 Davidia involucrata HOM05D005386 ORTHO05D006981 2.9e-76 290.0 382 45.5
TAR633G0448 Trochodendron aralioides HOM05D005386 ORTHO05D006981 6.4e-76 288.9 428 41.6
MD03G1149900 Malus domestica HOM05D005386 ORTHO05D006981 1.1e-75 288.1 420 41.4
Prupe.6G135900 Prunus persica HOM05D005386 ORTHO05D006981 6.0e-74 282.3 420 41.7
Ciclev10028837m.g Citrus clementina HOM05D005386 ORTHO05D006981 7.8e-74 282.0 433 40.4
CSS0011344 Camellia sinensis var. sinensis HOM05D005386 ORTHO05D006981 1.7e-73 280.8 382 44.5
CSS0028109 Camellia sinensis var. sinensis HOM05D005386 ORTHO05D006981 1.7e-73 280.8 382 44.5
QL01p011847 Quercus lobata HOM05D005386 ORTHO05D006981 2.3e-73 280.4 422 40.8
RcHm_v2.0_Chr5g0045261 Rosa chinensis HOM05D005386 ORTHO05D006981 1.5e-72 277.7 419 41.8
Duzib168G0172 Durio zibethinus HOM05D005386 ORTHO05D006981 5.6e-72 275.8 410 42.2
Sopen11g027400 Solanum pennellii HOM05D005386 ORTHO05D006981 2.1e-71 273.9 381 43.0
Potri.009G160500 Populus trichocarpa HOM05D005386 ORTHO05D006981 8.1e-71 271.9 422 40.5
Solyc11g068680.2 Solanum lycopersicum HOM05D005386 ORTHO05D006981 8.1e-71 271.9 381 42.8
Glyma.11G181300 Glycine max HOM05D005386 ORTHO05D006981 1.4e-70 271.2 425 38.6
CiPaw.14G098000 Carya illinoinensis HOM05D005386 ORTHO05D006981 6.8e-70 268.9 421 39.9
Atru.chr3.3168 Acer truncatum HOM05D005386 ORTHO05D006981 8.9e-70 268.5 380 42.9
Nn7g37254 Nelumbo nucifera HOM05D005386 ORTHO05D006981 1.2e-69 268.1 414 40.3
TPR.G17201 Trifolium pratense HOM05D005386 ORTHO05D006981 1.2e-69 268.1 423 39.2
Manes.04G001400 Manihot esculenta HOM05D005386 ORTHO05D006981 1.5e-69 267.7 425 39.5
Nitab4.5_0000731g0080 Nicotiana tabacum HOM05D005386 ORTHO05D006981 1.5e-69 267.7 407 42.3
Cfa009987 Carpinus fangiana HOM05D005386 ORTHO05D006981 3.4e-69 266.5 417 39.8
Nitab4.5_0008177g0060 Nicotiana tabacum HOM05D005386 ORTHO05D006981 3.4e-69 266.5 407 42.0
Haze_23346 Corylus avellana HOM05D005386 ORTHO05D006981 9.9e-69 265.0 421 39.4
vmacro14339 Vaccinium macrocarpon HOM05D005386 ORTHO05D006981 9.9e-69 265.0 409 42.8
Lj1A257T31 Lonicera japonica HOM05D005386 ORTHO05D006981 1.3e-68 264.6 373 42.4
Hma1.2p1_0319F.1_g123920 Hydrangea macrophylla HOM05D005386 ORTHO05D006981 2.2e-68 263.8 386 42.7
Lalb_Chr03g0028241 Lupinus albus HOM05D005386 ORTHO05D006981 2.9e-68 263.5 423 39.5
ATR0307G012 Amborella trichopoda HOM05D005386 ORTHO05D006981 8.3e-68 261.9 381 41.5
FvH4_2g14080 Fragaria vesca HOM05D005386 ORTHO05D006981 1.1e-67 261.5 408 38.5
Eucgr.J00523 Eucalyptus grandis HOM05D005386 ORTHO05D006981 1.4e-67 261.2 431 39.4
TWI31G0673 Tripterygium wilfordii HOM05D005386 ORTHO05D006981 2.4e-67 260.4 368 42.4
Sed0024067 Sechium edule HOM05D005386 ORTHO05D006981 3.2e-67 260.0 373 42.6
Peaxi162Scf00224g00218 Petunia axillaris HOM05D005386 ORTHO05D006981 9.2e-67 258.5 379 42.2
ClCG01G011810 Citrullus lanatus HOM05D005386 ORTHO05D006981 1.2e-66 258.1 424 39.4
DCAR_022894 Daucus carota HOM05D005386 ORTHO05D006981 4.6e-66 256.1 377 42.4
CANSAT54G1533 Cannabis sativa HOM05D005386 ORTHO05D006981 6.0e-66 255.8 426 39.0
Ca_19443_v3 Cicer arietinum L. HOM05D005386 ORTHO05D006981 7.8e-66 255.4 429 38.2
Cc01_g08820 Coffea canephora HOM05D005386 ORTHO05D006981 3.0e-65 253.4 389 42.2
CsaV3_1G015030 Cucumis sativus L. HOM05D005386 ORTHO05D006981 3.0e-65 253.4 420 37.6
PSO384G1357 Papaver somniferum HOM05D005386 ORTHO05D006981 6.6e-65 252.3 424 39.4
MSTRG.18771 Avicennia marina HOM05D005386 ORTHO05D006981 8.6e-65 251.9 383 41.8
Lj3g0020097 Lotus japonicus HOM05D005386 ORTHO05D006981 4.3e-64 249.6 431 38.5
THA.LOC104810925 Tarenaya hassleriana HOM05D005386 ORTHO05D006981 4.3e-64 249.6 381 39.9
PSO339G6531 Papaver somniferum HOM05D005386 ORTHO05D006981 8.1e-63 245.4 424 38.4
MBI19_g34002_MAGBIO Magnolia biondii HOM05D005386 ORTHO05D006981 1.4e-62 244.6 405 39.3
Psat7g187240 Pisum sativum HOM05D005386 ORTHO05D006981 4.0e-62 243.0 366 39.1
AL6G33360 Arabidopsis lyrata HOM05D005386 ORTHO05D006981 6.8e-62 242.3 402 39.1
Glyma.12G091900 Glycine max HOM05D005386 ORTHO05D006981 6.8e-62 242.3 424 36.3
AT5G22340 Arabidopsis thaliana HOM05D005386 ORTHO05D006981 8.9e-62 241.9 429 37.1
Carub.0006s2008 Capsella rubella HOM05D005386 ORTHO05D006981 1.2e-61 241.5 437 38.0
Rhsim01G0203700 Rhododendron simsii HOM05D005386 ORTHO05D006981 1.2e-61 241.5 381 40.2
arahy.Tifrunner.gnm1.ann1.E6G7P2 Arachis hypogaea HOM05D005386 ORTHO05D006981 1.5e-61 241.1 434 36.6
Duzib170G0830 Durio zibethinus HOM05D005386 ORTHO05D006981 4.4e-61 239.6 370 41.1
AUR62015198 Chenopodium quinoa HOM05D005386 ORTHO05D006981 5.8e-61 239.2 382 41.1
Thhalv10014124m.g Eutrema salsugineum HOM05D005386 ORTHO05D006981 9.9e-61 238.4 395 38.7
BraA03t10382Z Brassica rapa HOM05D005386 ORTHO05D006981 2.2e-60 237.3 429 37.5
AUR62017661 Chenopodium quinoa HOM05D005386 ORTHO05D006981 2.2e-60 237.3 376 41.2
Sp6g22900 Schrenkiella parvula HOM05D005386 ORTHO05D006981 2.2e-60 237.3 432 37.3
A03p10700 Brassica napus HOM05D005386 ORTHO05D006981 4.2e-59 233.0 438 36.8
BolC3t13704H Brassica oleracea HOM05D005386 ORTHO05D006981 7.1e-59 232.3 378 38.4
FAN20G2771 Fragaria x ananassa HOM05D005386 ORTHO05D006981 1.6e-58 231.1 420 34.5
Medtr4g052500 Medicago truncatula HOM05D005386 ORTHO05D006981 3.5e-58 229.9 376 37.8
C03p12310 Brassica napus HOM05D005386 ORTHO05D006981 4.6e-58 229.6 378 38.1
ECA238G0234 Erigeron canadensis HOM05D005386 ORTHO05D006981 1.1e-56 224.9 422 36.7
Migut.D02364 Erythranthe guttata HOM05D005386 ORTHO05D006981 4.3e-56 223.0 392 37.8
Lsat_1_v5_gn_2_3840 Lactuca sativa HOM05D005386 ORTHO05D006981 5.6e-56 222.6 367 38.4
HanXRQChr06g0183931 Helianthus annuus HOM05D005386 ORTHO05D006981 2.8e-55 220.3 371 39.6
Os03g0322600 Oryza sativa ssp. japonica HOM05D005386 ORTHO05D006981 9.0e-54 215.3 408 36.0
BcaB01g04714 Brassica carinata HOM05D005386 ORTHO05D006981 8.4e-52 208.8 380 36.6
Actinidia37072 Actinidia chinensis HOM05D005386 ORTHO05D006981 4.2e-51 206.5 388 35.8
MELO3C025590.2 Cucumis melo HOM05D005386 ORTHO05D006981 5.4e-51 206.1 386 36.8
SEGI_27763 Sequoiadendron giganteum HOM05D005386 ORTHO05D006981 5.4e-51 206.1 382 35.9
Zm00001eb395560 Zea mays HOM05D005386 ORTHO05D006981 7.1e-51 205.7 381 35.2
PGR119G1266 Punica granatum HOM05D005386 ORTHO05D006981 3.9e-49 199.9 364 37.4
unitig_736.g22394 Utricularia gibba HOM05D005386 ORTHO05D006981 3.6e-47 193.4 368 37.8
HPP92_001703 Vanilla planifolia HOM05D005386 ORTHO05D006981 1.4e-46 191.4 402 34.1
BcaC01g06587 Brassica carinata HOM05D005386 ORTHO05D006981 5.3e-46 189.5 392 32.1
Oeu014472.1 Olea europaea HOM05D005386 ORTHO05D006981 6.9e-46 189.1 202 53.0
CDE08G0019 Ceratophyllum demersum HOM05D005386 ORTHO05D006981 1.2e-45 188.3 374 35.3
SGA_v2.0_scaffold7G04001 Striga asiatica HOM05D005386 ORTHO05D006981 1.5e-45 188.0 405 34.8
arahy.Tifrunner.gnm1.ann1.PADK5G Arachis hypogaea HOM05D005386 ORTHO05D006981 1.7e-44 184.5 426 31.9
Aqoxy1G00008 Aquilegia oxysepala HOM05D005386 ORTHO05D006981 4.9e-44 183.0 388 33.0
Zm00001eb015340 Zea mays HOM05D005386 ORTHO05D006981 4.9e-44 183.0 309 37.5
AUR62014970 Chenopodium quinoa HOM05D005386 ORTHO05D006981 1.1e-43 181.8 385 36.9
FAN15G3687 Fragaria x ananassa HOM05D005386 ORTHO05D006981 6.0e-42 176.0 130 65.4
FAN24G0713 Fragaria x ananassa HOM05D005386 ORTHO05D006981 3.0e-41 173.7 307 36.8
Hma1.2p1_0319F.1_g123910 Hydrangea macrophylla HOM05D005386 ORTHO05D006981 8.7e-41 172.2 194 51.0
Cpa.g.sc195.24 Carica papaya HOM05D005386 ORTHO05D006981 3.3e-40 170.2 194 48.5
Zm00001eb285540 Zea mays HOM05D005386 ORTHO05D006981 1.6e-39 167.9 216 45.8
Mapoly0094s0013 Marchantia polymorpha HOM05D005386 ORTHO05D006981 3.2e-35 153.7 380 29.7
Phvul.011G096200 Phaseolus vulgaris HOM05D005386 ORTHO05D006981 2.5e-32 144.1 337 33.2
Ciclev10029637m.g Citrus clementina HOM05D005386 ORTHO05D006981 2.8e-31 140.6 106 65.1
Ciclev10029895m.g Citrus clementina HOM05D005386 ORTHO05D006981 7.6e-29 132.5 106 63.2
BcaC01g06590 Brassica carinata HOM05D005386 ORTHO05D006981 8.4e-28 129.0 311 32.2
AUR62043809 Chenopodium quinoa HOM05D004271 ORTHO05D006011 4.2e-27 126.7 181 44.2
SalBow6G0611 Salvia bowleyana HOM05D005386 ORTHO05D006981 4.6e-26 123.2 362 30.7
Aa31LG1G13200 Aethionema arabicum HOM05D005386 ORTHO05D006981 6.1e-26 122.9 300 32.3
Pp3c20_23100 Physcomitrium patens HOM05D005386 ORTHO05D006981 3.9e-25 120.2 202 38.6
Aa31LG1G13190 Aethionema arabicum HOM05D005386 ORTHO05D006981 1.1e-24 118.6 87 60.9
VMungo1127G1152 Vigna mungo HOM05D005386 ORTHO05D006981 1.6e-23 114.8 81 65.4
AagrBONN_evm.TU.Sc2ySwM_228.4159 Anthoceros agrestis HOM05D005386 ORTHO05D006981 3.7e-23 113.6 200 40.5
FvH4_2g10370 Fragaria vesca HOM05D005386 ORTHO05D006981 1.1e-22 112.1 87 56.3
SMO338G0026 Selaginella moellendorffii HOM05D005386 ORTHO05D006981 4.1e-22 110.2 194 38.1
TAR633G2192 Trochodendron aralioides HOM05D005386 ORTHO05D006981 6.9e-22 109.4 216 31.5
Thecc.09G278700 Theobroma cacao HOM05D005386 ORTHO05D006981 9.0e-22 109.0 144 43.8
arahy.Tifrunner.gnm1.ann1.M18R9V Arachis hypogaea HOM05D005386 ORTHO05D006981 2.6e-21 107.5 113 52.2
SMO140G0002 Selaginella moellendorffii HOM05D005386 ORTHO05D006981 5.9e-21 106.3 377 27.1
FAN24G3375 Fragaria x ananassa HOM05D005386 ORTHO05D006981 3.8e-20 103.6 138 41.3
VMungo1127G0965 Vigna mungo HOM05D005386 ORTHO05D006981 1.1e-19 102.1 236 30.5
CARHR191200 Cardamine hirsuta HOM05D005386 ORTHO05D006981 6.3e-15 86.3 169 36.7
arahy.Tifrunner.gnm1.ann1.XDN0DP Arachis hypogaea HOM05D005386 ORTHO05D006981 8.5e-12 75.9 75 53.3
arahy.Tifrunner.gnm1.ann1.J76LRM Arachis hypogaea HOM05D005386 ORTHO05D006981 7.2e-11 72.8 93 45.2
MD09G1069600 Malus domestica HOM05D005386 ORTHO05D006981 3.3e-08 63.9 109 34.9
arahy.Tifrunner.gnm1.ann1.TQJ2IB Arachis hypogaea HOM05D005386 ORTHO05D006981 4.4e-08 63.5 82 43.9
Cpa.g.sc195.25 Carica papaya HOM05D005386 ORTHO05D006981 5.7e-08 63.2 46 65.2
CBR_g22416 Chara braunii HOM05D005386 ORTHO05D006981 7.4e-08 62.8 94 36.2
arahy.Tifrunner.gnm1.ann1.9EB2HI Arachis hypogaea HOM05D005386 ORTHO05D006981 1.4e-06 58.5 71 47.9
arahy.Tifrunner.gnm1.ann1.XD28JK Arachis hypogaea HOM05D005386 ORTHO05D006981 1.4e-06 58.5 69 49.3
Hma1.2p1_0319F.1_g123930 Hydrangea macrophylla HOM05D005386 ORTHO05D006981 4.1e-06 57.0 70 44.3
Ciclev10029903m.g Citrus clementina HOM05D005386 ORTHO05D006981 9.1e-06 55.8 52 48.1


User provided reference genes

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