Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund18613 Selenicereus undatus HOM05D007092 ORTHO05D008947 6.3e-105 384.0 183 100.0
Sc12g0010950 Simmondsia chinensis HOM05D007092 ORTHO05D008947 1.3e-65 253.4 179 65.9
EL10Ac7g18225 Beta vulgaris HOM05D007092 ORTHO05D008947 1.6e-63 246.5 195 61.0
Oeu049655.1 Olea europaea HOM05D007092 ORTHO05D008947 3.1e-59 232.3 179 59.8
MD09G1158700 Malus domestica HOM05D007092 ORTHO05D008947 4.4e-58 228.4 180 56.1
Dinv37796 Davidia involucrata HOM05D007092 ORTHO05D008947 9.9e-58 227.3 180 58.9
Hma1.2p1_1104F.1_g257360 Hydrangea macrophylla HOM05D007092 ORTHO05D008947 2.9e-57 225.7 180 59.4
AUR62025584 Chenopodium quinoa HOM05D007092 ORTHO05D008947 4.9e-57 224.9 205 54.6
Atru.chr1.2779 Acer truncatum HOM05D007092 ORTHO05D008947 8.3e-57 224.2 180 57.2
Cc04_g00380 Coffea canephora HOM05D007092 ORTHO05D008947 1.1e-56 223.8 181 60.2
PSO063G1240 Papaver somniferum HOM05D007092 ORTHO05D008947 1.9e-56 223.0 181 56.4
QL05p083231 Quercus lobata HOM05D007092 ORTHO05D008947 5.4e-56 221.5 180 58.9
Prupe.3G167100 Prunus persica HOM05D007092 ORTHO05D008947 7.1e-56 221.1 191 53.9
Solyc06g063230.3 Solanum lycopersicum HOM05D007092 ORTHO05D008947 9.2e-56 220.7 180 57.8
Sopen06g022680 Solanum pennellii HOM05D007092 ORTHO05D008947 1.2e-55 220.3 180 57.8
Nitab4.5_0002661g0010 Nicotiana tabacum HOM05D007092 ORTHO05D008947 3.5e-55 218.8 181 58.0
Eucgr.F04011 Eucalyptus grandis HOM05D007092 ORTHO05D008947 6.0e-55 218.0 180 58.3
GSVIVG01016136001 Vitis vinifera HOM05D007092 ORTHO05D008947 6.0e-55 218.0 180 56.7
FvH4_6g37290 Fragaria vesca HOM05D007092 ORTHO05D008947 1.0e-54 217.2 180 56.7
Nitab4.5_0008628g0030 Nicotiana tabacum HOM05D007092 ORTHO05D008947 1.0e-54 217.2 181 57.5
MBI14_g30703_MAGBIO Magnolia biondii HOM05D007092 ORTHO05D008947 1.7e-54 216.5 181 57.5
PGR102G2093 Punica granatum HOM05D007092 ORTHO05D008947 1.7e-54 216.5 180 56.1
PGSC0003DMG400026517 Solanum tuberosum HOM05D007092 ORTHO05D008947 1.7e-54 216.5 180 56.7
ATR0580G293 Amborella trichopoda HOM05D007092 ORTHO05D008947 2.3e-54 216.1 181 56.9
RcHm_v2.0_Chr2g0150121 Rosa chinensis HOM05D007092 ORTHO05D008947 3.0e-54 215.7 180 56.7
Actinidia21869 Actinidia chinensis HOM05D007092 ORTHO05D008947 3.9e-54 215.3 182 55.5
Hund18612 Selenicereus undatus HOM05D007092 ORTHO05D008947 5.1e-54 214.9 186 57.5
arahy.Tifrunner.gnm1.ann1.U4SUAB Arachis hypogaea HOM05D007092 ORTHO05D008947 6.6e-54 214.5 181 54.7
Lsat_1_v5_gn_5_137421 Lactuca sativa HOM05D007092 ORTHO05D008947 6.6e-54 214.5 180 53.9
arahy.Tifrunner.gnm1.ann1.2I6Q5Y Arachis hypogaea HOM05D007092 ORTHO05D008947 8.6e-54 214.2 181 54.7
AUR62001368 Chenopodium quinoa HOM05D007092 ORTHO05D008947 8.6e-54 214.2 178 57.3
Ciclev10026125m.g Citrus clementina HOM05D007092 ORTHO05D008947 2.5e-53 212.6 180 53.3
Nn2g12583 Nelumbo nucifera HOM05D007092 ORTHO05D008947 2.5e-53 212.6 180 56.7
CANSAT01G0482 Cannabis sativa HOM05D007092 ORTHO05D008947 3.3e-53 212.2 178 55.6
CSS0038887 Camellia sinensis var. sinensis HOM05D007092 ORTHO05D008947 4.3e-53 211.8 180 55.6
Thecc.06G015800 Theobroma cacao HOM05D007092 ORTHO05D008947 4.3e-53 211.8 180 55.0
Manes.01G181400 Manihot esculenta HOM05D007092 ORTHO05D008947 7.3e-53 211.1 180 56.1
VMungo0647G0167 Vigna mungo HOM05D007092 ORTHO05D008947 7.3e-53 211.1 181 55.2
arahy.Tifrunner.gnm1.ann1.65RD4S Arachis hypogaea HOM05D007092 ORTHO05D008947 1.2e-52 210.3 181 54.1
SalBow6G0042 Salvia bowleyana HOM05D007092 ORTHO05D008947 1.2e-52 210.3 180 53.3
HanXRQChr10g0311491 Helianthus annuus HOM05D007092 ORTHO05D008947 1.6e-52 209.9 180 55.0
Phvul.008G255700 Phaseolus vulgaris HOM05D007092 ORTHO05D008947 1.6e-52 209.9 181 54.7
ECA234G1665 Erigeron canadensis HOM05D007092 ORTHO05D008947 6.2e-52 208.0 180 53.3
Medtr4g006030 Medicago truncatula HOM05D007092 ORTHO05D008947 1.1e-51 207.2 181 54.7
Sed0004999 Sechium edule HOM05D007092 ORTHO05D008947 2.4e-51 206.1 180 55.0
Potri.010G250100 Populus trichocarpa HOM05D007092 ORTHO05D008947 4.0e-51 205.3 180 53.9
Sabra10G0194500 Salix brachista HOM05D007092 ORTHO05D008947 4.0e-51 205.3 180 53.9
CsaV3_7G033820 Cucumis sativus L. HOM05D007092 ORTHO05D008947 1.2e-50 203.8 180 53.3
Duzib160G0445 Durio zibethinus HOM05D007092 ORTHO05D008947 1.5e-50 203.4 180 53.3
FAN02G1258 Fragaria x ananassa HOM05D007092 ORTHO05D008947 3.4e-50 202.2 217 47.9
Aqoxy7G03199 Aquilegia oxysepala HOM05D007092 ORTHO05D008947 4.4e-50 201.8 182 53.3
Ca_20954_v3 Cicer arietinum L. HOM05D007092 ORTHO05D008947 4.4e-50 201.8 182 52.7
Migut.I01177 Erythranthe guttata HOM05D007092 ORTHO05D008947 5.8e-50 201.4 180 51.7
BolC2t09103H Brassica oleracea HOM05D007092 ORTHO05D008947 7.6e-50 201.1 179 50.8
AT1G73090 Arabidopsis thaliana HOM05D007092 ORTHO05D008947 9.9e-50 200.7 179 51.4
TPR.G38753 Trifolium pratense HOM05D007092 ORTHO05D008947 9.9e-50 200.7 181 52.5
TAR383G0306 Trochodendron aralioides HOM05D007092 ORTHO05D008947 1.3e-49 200.3 166 56.6
Lalb_Chr04g0264731 Lupinus albus HOM05D007092 ORTHO05D008947 1.7e-49 199.9 182 51.6
A02p18440 Brassica napus HOM05D007092 ORTHO05D008947 2.2e-49 199.5 179 50.3
C02p30520 Brassica napus HOM05D007092 ORTHO05D008947 2.2e-49 199.5 179 50.8
BraA02t06883Z Brassica rapa HOM05D007092 ORTHO05D008947 2.2e-49 199.5 179 50.3
Lj3g0013116 Lotus japonicus HOM05D007092 ORTHO05D008947 2.9e-49 199.1 180 52.8
Glyma.07G003900 Glycine max HOM05D007092 ORTHO05D008947 3.8e-49 198.7 181 52.5
Peaxi162Scf00207g01537 Petunia axillaris HOM05D007092 ORTHO05D008947 6.4e-49 198.0 203 47.8
CARHR066060 Cardamine hirsuta HOM05D007092 ORTHO05D008947 8.4e-49 197.6 179 48.6
ClCG09G001510 Citrullus lanatus HOM05D007092 ORTHO05D008947 1.1e-48 197.2 199 50.8
Carub.0002s1986 Capsella rubella HOM05D007092 ORTHO05D008947 1.9e-48 196.4 179 49.7
Thhalv10018923m.g Eutrema salsugineum HOM05D007092 ORTHO05D008947 1.9e-48 196.4 179 49.2
Aa31LG4G3360 Aethionema arabicum HOM05D007092 ORTHO05D008947 3.2e-48 195.7 179 49.2
AL2G32840 Arabidopsis lyrata HOM05D007092 ORTHO05D008947 4.1e-48 195.3 179 50.3
Gohir.D10G007300 Gossypium hirsutum HOM05D007092 ORTHO05D008947 2.1e-47 193.0 180 48.9
Gohir.A10G007400 Gossypium hirsutum HOM05D007092 ORTHO05D008947 2.7e-47 192.6 180 48.9
Gorai.011G008000 Gossypium raimondii HOM05D007092 ORTHO05D008947 2.7e-47 192.6 180 48.9
Sp5g28050 Schrenkiella parvula HOM05D007092 ORTHO05D008947 2.3e-46 189.5 180 49.4
Haze_15817 Corylus avellana HOM05D007092 ORTHO05D008947 3.3e-45 185.7 185 50.8
unitig_748.g7475 Utricularia gibba HOM05D007092 ORTHO05D008947 7.3e-45 184.5 182 49.5
HPP92_017449 Vanilla planifolia HOM05D007092 ORTHO05D008947 9.6e-45 184.1 185 47.6
MELO3C024294.2 Cucumis melo HOM05D007092 ORTHO05D008947 6.2e-44 181.4 179 49.7
Lj6C21G9 Lonicera japonica HOM05D007092 ORTHO05D008947 6.2e-44 181.4 179 48.6
Cfa021192 Carpinus fangiana HOM05D007092 ORTHO05D008947 1.8e-43 179.9 131 60.3
THA.LOC104823333 Tarenaya hassleriana HOM05D007092 ORTHO05D008947 1.7e-41 173.3 183 48.1
COL.COLO4_22872 Corchorus olitorius HOM05D007092 ORTHO05D008947 4.9e-41 171.8 166 49.4
CDE07G2035 Ceratophyllum demersum HOM05D007092 ORTHO05D008947 8.7e-38 161.0 128 57.8
arahy.Tifrunner.gnm1.ann1.NXC5E0 Arachis hypogaea HOM05D007092 ORTHO05D008947 4.3e-37 158.7 105 64.8
C02p30540 Brassica napus HOM05D007092 ORTHO05D008947 1.7e-33 146.7 101 58.4
Lj6C3G1 Lonicera japonica HOM05D000076 ORTHO05D001279 1.3e-30 137.1 153 43.8
arahy.Tifrunner.gnm1.ann1.DEI7NY Arachis hypogaea HOM05D007092 ORTHO05D008947 1.8e-30 136.7 78 71.8
SGA_v2.0_scaffold122G33289 Striga asiatica HOM05D002895 ORTHO05D003286 1.1e-29 134.0 138 46.4
Glyma.08G222700 Glycine max HOM05D007092 ORTHO05D008947 9.0e-27 124.4 77 64.9
AagrBONN_evm.TU.Sc2ySwM_344.2112 Anthoceros agrestis HOM05D007092 ORTHO05D008947 1.7e-25 120.2 177 39.5
Mapoly0073s0046 Marchantia polymorpha HOM05D007092 ORTHO05D008947 4.9e-25 118.6 187 37.4
SEGI_20536 Sequoiadendron giganteum HOM05D007092 ORTHO05D008947 6.0e-23 111.7 84 56.0
Lj6A3T47 Lonicera japonica HOM05D007092 ORTHO05D008947 1.3e-22 110.5 67 62.7
SMO230G0107 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 1.9e-21 106.7 186 33.9
SMO336G0036 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 1.3e-20 104.0 193 32.6
Pp3c13_10570 Physcomitrium patens HOM05D007092 ORTHO05D008947 1.0e-17 94.4 192 31.8
arahy.Tifrunner.gnm1.ann1.BLVE7G Arachis hypogaea HOM05D007092 ORTHO05D008947 1.9e-16 90.1 49 77.6
arahy.Tifrunner.gnm1.ann1.LQFB73 Arachis hypogaea HOM05D007092 ORTHO05D008947 1.9e-16 90.1 49 77.6
BcaC07g40307 Brassica carinata HOM05D007092 ORTHO05D008947 5.7e-13 78.6 63 50.8
arahy.Tifrunner.gnm1.ann1.KBSP04 Arachis hypogaea HOM05D002221 ORTHO05D002626 1.8e-11 73.6 58 53.4
arahy.Tifrunner.gnm1.ann1.R6H1XR Arachis hypogaea HOM05D002221 ORTHO05D002626 1.8e-11 73.6 58 53.4
Actinidia38794 Actinidia chinensis HOM05D007092 ORTHO05D008947 6.5e-09 65.1 54 53.7
arahy.Tifrunner.gnm1.ann1.AT2CXE Arachis hypogaea HOM05D007092 ORTHO05D008947 1.1e-08 64.3 42 57.1
BcaB05g22026 Brassica carinata HOM05D007092 ORTHO05D008947 2.7e-07 59.7 58 44.8
Cpa.g.sc3948.1 Carica papaya HOM05D007092 ORTHO05D008947 4.6e-07 58.9 31 67.7


User provided reference genes

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