Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund18410 Selenicereus undatus HOM05D008980 ORTHO05D012894 4.4e-183 644.4 310 100.0
Hund22852 Selenicereus undatus HOM05D008980 ORTHO05D012894 3.2e-125 452.2 310 73.9
Hund30418 Selenicereus undatus HOM05D008980 ORTHO05D012894 5.9e-71 271.9 195 70.3
Hund27537 Selenicereus undatus HOM05D008980 ORTHO05D012894 4.2e-69 265.8 193 67.4
Hund28344 Selenicereus undatus HOM05D008980 ORTHO05D012894 4.7e-68 262.3 193 66.8
Hund30430 Selenicereus undatus HOM05D008980 ORTHO05D012894 5.2e-67 258.8 238 57.1
Hund25873 Selenicereus undatus HOM05D008980 ORTHO05D012894 3.7e-65 252.7 225 59.6
Hund12930 Selenicereus undatus HOM05D008980 ORTHO05D012894 4.2e-61 239.2 172 70.9
Hund20309 Selenicereus undatus HOM05D008980 ORTHO05D012894 8.9e-59 231.5 170 65.9
Hund20308 Selenicereus undatus HOM05D008980 ORTHO05D012894 7.0e-56 221.9 158 67.1
Hund12729 Selenicereus undatus HOM05D008980 ORTHO05D012894 2.0e-50 203.8 197 56.9
Hund25874 Selenicereus undatus HOM05D008980 ORTHO05D012894 2.5e-45 186.8 139 68.3
Hund27432 Selenicereus undatus HOM05D008980 ORTHO05D012894 5.4e-40 169.1 177 56.5
Hund25904 Selenicereus undatus HOM05D008980 ORTHO05D012894 2.1e-39 167.2 194 49.5
Hund12734 Selenicereus undatus HOM05D008980 ORTHO05D012894 1.6e-36 157.5 141 60.3
Hund25925 Selenicereus undatus HOM05D002302 ORTHO05D002728 8.6e-30 135.2 205 41.0
Hund24262 Selenicereus undatus HOM05D008980 ORTHO05D016385 1.5e-29 134.4 68 89.7
Hund01396 Selenicereus undatus HOM05D008980 ORTHO05D016385 1.6e-28 131.0 324 34.6
Hund12793 Selenicereus undatus HOM05D008980 ORTHO05D016385 1.7e-25 120.9 65 81.5
Hund26275 Selenicereus undatus HOM05D008980 ORTHO05D016385 1.4e-24 117.9 65 84.6
Hund12678 Selenicereus undatus HOM05D008980 ORTHO05D012894 1.1e-19 101.7 167 39.5
Hund12733 Selenicereus undatus HOM05D008980 ORTHO05D012894 3.1e-19 100.1 78 57.7
Prupe.5G246300 Prunus persica HOM05D000004 ORTHO05D000002 7.3e-13 79.0 84 41.7
QL11p024776 Quercus lobata HOM05D000004 ORTHO05D000002 2.1e-12 77.4 111 36.9
QL09p008939 Quercus lobata HOM05D000004 ORTHO05D000002 2.8e-12 77.0 111 36.9
PSO675G3106 Papaver somniferum HOM05D000004 ORTHO05D000002 8.1e-12 75.5 146 27.4
PSO017G5027 Papaver somniferum HOM05D000004 ORTHO05D000002 1.4e-11 74.7 146 27.4
PSO675G1206 Papaver somniferum HOM05D000004 ORTHO05D000002 1.4e-11 74.7 146 27.4
Medtr7g105270 Medicago truncatula HOM05D000004 ORTHO05D000002 2.4e-11 73.9 84 39.3
PSO161G0062 Papaver somniferum HOM05D000004 ORTHO05D000002 2.4e-11 73.9 146 27.4
PSO478G0516 Papaver somniferum HOM05D000004 ORTHO05D000002 2.4e-11 73.9 146 27.4
PSO478G0935 Papaver somniferum HOM05D000004 ORTHO05D000002 2.4e-11 73.9 146 27.4
Hund08182 Selenicereus undatus HOM05D008980 ORTHO05D012894 2.4e-11 73.9 64 65.6
Hund23844 Selenicereus undatus HOM05D008980 ORTHO05D012894 2.4e-11 73.9 55 67.3
Hund10392 Selenicereus undatus HOM05D013854 ORTHO05D000563 3.1e-11 73.6 85 41.2
Medtr4g102460 Medicago truncatula HOM05D000004 ORTHO05D000002 5.3e-11 72.8 112 33.0
Hund08493 Selenicereus undatus HOM05D008980 ORTHO05D000563 5.3e-11 72.8 84 42.9
PSO675G6845 Papaver somniferum HOM05D000004 ORTHO05D000002 9.0e-11 72.0 127 27.6
Hund23938 Selenicereus undatus HOM05D000004 ORTHO05D000563 9.0e-11 72.0 85 43.5
PSO724G0202 Papaver somniferum HOM05D000004 ORTHO05D000002 3.4e-10 70.1 146 26.7
ECA232G3180 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.5e-10 69.7 82 36.6
ECA246G3393 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.8e-10 69.3 83 39.8
Medtr7g056297 Medicago truncatula HOM05D000004 ORTHO05D000002 5.8e-10 69.3 77 41.6
PSO063G4042 Papaver somniferum HOM05D000004 ORTHO05D000002 5.8e-10 69.3 130 27.7
ECA246G2655 Erigeron canadensis HOM05D000004 ORTHO05D009927 7.6e-10 68.9 80 36.2
Dinv38966 Davidia involucrata HOM05D000151 ORTHO05D000074 9.9e-10 68.6 83 37.3
ECA232G2072 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.9e-10 68.6 83 39.8
PGR119G2216 Punica granatum HOM05D000004 ORTHO05D000563 1.3e-09 68.2 83 36.1
HanXRQChr10g0318501 Helianthus annuus HOM05D000004 ORTHO05D000002 3.8e-09 66.6 155 31.0
Hund20088 Selenicereus undatus HOM05D000004 ORTHO05D000563 3.8e-09 66.6 166 30.1
CSS0050245 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 4.9e-09 66.2 98 36.7
Rhsim08G0065100 Rhododendron simsii HOM05D008333 ORTHO05D010371 4.9e-09 66.2 83 36.1
SEGI_17572 Sequoiadendron giganteum HOM05D000103 ORTHO05D000049 4.9e-09 66.2 102 32.4
Ah.10g032230 Amaranthus hybridus HOM05D000004 ORTHO05D000002 6.4e-09 65.9 77 37.7
Ah.15g100530 Amaranthus hybridus HOM05D000004 ORTHO05D000563 6.4e-09 65.9 77 39.0
Ah.01g015870 Amaranthus hybridus HOM05D000004 ORTHO05D000002 8.4e-09 65.5 77 37.7
Ah.01g022520 Amaranthus hybridus HOM05D008055 ORTHO05D009927 8.4e-09 65.5 77 37.7
Ah.10g025190 Amaranthus hybridus HOM05D000004 ORTHO05D000002 8.4e-09 65.5 104 36.5
Ah.10g025200 Amaranthus hybridus HOM05D000004 ORTHO05D000563 8.4e-09 65.5 104 36.5
PGR002G0001 Punica granatum HOM05D000004 ORTHO05D000002 8.4e-09 65.5 85 37.6
Rhsim02G0016700 Rhododendron simsii HOM05D003956 ORTHO05D004850 8.4e-09 65.5 83 34.9
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 8.4e-09 65.5 83 34.9
ECA238G1029 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.1e-08 65.1 85 41.2
PGR083G2793 Punica granatum HOM05D000004 ORTHO05D000002 1.1e-08 65.1 85 37.6
Hund19909 Selenicereus undatus HOM05D008634 ORTHO05D000695 1.1e-08 65.1 101 37.6
ECA246G2152 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.4e-08 64.7 100 37.0
Rhsim04G0098200 Rhododendron simsii HOM05D000004 ORTHO05D000563 1.4e-08 64.7 83 32.5
TWI77G0626 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.4e-08 64.7 83 37.3
Dinv17484 Davidia involucrata HOM05D000004 ORTHO05D000563 1.9e-08 64.3 80 37.5
Thecc.01G105600 Theobroma cacao HOM05D000004 ORTHO05D000563 1.9e-08 64.3 101 33.7
ECA246G2687 Erigeron canadensis HOM05D000321 ORTHO05D000002 2.4e-08 63.9 100 37.0
Rhsim04G0049200 Rhododendron simsii HOM05D000004 ORTHO05D000563 2.4e-08 63.9 83 33.7
PGR102G1331 Punica granatum HOM05D000004 ORTHO05D000002 3.2e-08 63.5 82 35.4
ECA238G1641 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.2e-08 63.2 100 36.0
ECA240G4601 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.2e-08 63.2 100 36.0
SEGI_23514 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 4.2e-08 63.2 84 34.5
ECA248G1590 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.1e-08 62.4 71 39.4
Prupe.7G034800 Prunus persica HOM05D000004 ORTHO05D000563 7.1e-08 62.4 73 35.6
Rhsim13G0219800 Rhododendron simsii HOM05D000004 ORTHO05D000563 7.1e-08 62.4 86 32.6
Hund17465 Selenicereus undatus HOM05D008980 ORTHO05D016385 7.1e-08 62.4 81 38.3
TAR143G0002 Trochodendron aralioides HOM05D000004 ORTHO05D000563 7.1e-08 62.4 79 35.4
ECA238G0032 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.3e-08 62.0 94 34.0
CiPaw.14G083400 Carya illinoinensis HOM05D000004 ORTHO05D000563 1.2e-07 61.6 83 34.9
ECA236G0016 Erigeron canadensis HOM05D009731 ORTHO05D010740 1.2e-07 61.6 83 36.1
Hma1.2p1_0314F.1_g122100 Hydrangea macrophylla HOM05D000004 ORTHO05D009927 1.2e-07 61.6 102 32.4
PGR004G1008 Punica granatum HOM05D000004 ORTHO05D000002 1.2e-07 61.6 80 35.0
SEGI_33560 Sequoiadendron giganteum HOM05D000991 ORTHO05D000563 1.2e-07 61.6 80 38.8
ECA240G1927 Erigeron canadensis HOM05D000145 ORTHO05D000115 1.6e-07 61.2 100 36.0
ECA246G4319 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.6e-07 61.2 80 38.8
ECA248G0423 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.1e-07 60.8 83 34.9
PGR142G2802 Punica granatum HOM05D000004 ORTHO05D000002 2.1e-07 60.8 83 36.1
RcHm_v2.0_Chr7g0227361 Rosa chinensis HOM05D000038 ORTHO05D030549 2.1e-07 60.8 195 26.2
ECA233G4168 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.7e-07 60.5 83 34.9
ECA234G0885 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.7e-07 60.5 82 39.0
TPR.G15004 Trifolium pratense HOM05D000004 ORTHO05D000563 2.7e-07 60.5 87 35.6
ECA232G2467 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.5e-07 60.1 83 34.9
ECA238G3445 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.5e-07 60.1 83 34.9
ECA246G1906 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.5e-07 60.1 85 40.0
PGR083G2455 Punica granatum HOM05D000004 ORTHO05D000002 3.5e-07 60.1 71 39.4
PGR102G1257 Punica granatum HOM05D000004 ORTHO05D000002 3.5e-07 60.1 71 36.6
Hund24057 Selenicereus undatus HOM05D008634 ORTHO05D016385 3.5e-07 60.1 39 74.4
SEGI_28996 Sequoiadendron giganteum HOM05D013116 ORTHO05D000563 3.5e-07 60.1 87 34.5
Dinv06798 Davidia involucrata HOM05D000004 ORTHO05D000563 4.6e-07 59.7 80 35.0
ECA247G0559 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.6e-07 59.7 83 33.7
SEGI_18132 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 4.6e-07 59.7 82 34.1
ECA232G2839 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.0e-07 59.3 83 32.5
ECA240G3119 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.0e-07 59.3 83 36.1
Rhsim02G0160700 Rhododendron simsii HOM05D000004 ORTHO05D000563 6.0e-07 59.3 83 32.5
RhsimUnG0230800 Rhododendron simsii HOM05D000004 ORTHO05D000563 6.0e-07 59.3 83 32.5
Ah.01g010760 Amaranthus hybridus HOM05D000004 ORTHO05D000563 7.9e-07 58.9 76 36.8
ECA232G0653 Erigeron canadensis HOM05D000006 ORTHO05D000563 7.9e-07 58.9 83 32.5
ECA246G1667 Erigeron canadensis HOM05D000003 ORTHO05D000007 7.9e-07 58.9 71 38.0
ECA277G0004 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.9e-07 58.9 71 36.6
ECA236G1636 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.0e-06 58.5 83 32.5
Potri.001G006850 Populus trichocarpa HOM05D028484 ORTHO05D000563 1.0e-06 58.5 82 32.9
Sabra15G0032500 Salix brachista HOM05D004254 ORTHO05D000563 1.0e-06 58.5 82 35.4
SEGI_26381 Sequoiadendron giganteum HOM05D001575 ORTHO05D001536 1.0e-06 58.5 85 31.8
TPR.G20902 Trifolium pratense HOM05D008055 ORTHO05D000563 1.0e-06 58.5 87 34.5
TWI09G0867 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.0e-06 58.5 83 31.3
EL10Ac7g17389 Beta vulgaris HOM05D000004 ORTHO05D000563 1.3e-06 58.2 93 34.4
AUR62025386 Chenopodium quinoa HOM05D000004 ORTHO05D000563 1.3e-06 58.2 84 38.1
ECA234G0098 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.3e-06 58.2 83 33.7
PSO675G6918 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-06 58.2 72 34.7
SHI33686 Sapria himalayana HOM05D000004 ORTHO05D000563 1.3e-06 58.2 85 31.8
Atru.chr9.1417 Acer truncatum HOM05D000004 ORTHO05D000563 1.8e-06 57.8 84 34.5
EL10Ac4g08772 Beta vulgaris HOM05D000004 ORTHO05D000563 1.8e-06 57.8 93 34.4
ECA232G1176 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.8e-06 57.8 83 33.7
ECA233G2470 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.8e-06 57.8 102 28.4
ECA247G3114 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.8e-06 57.8 83 33.7
FvH4_3g40201 Fragaria vesca HOM05D000004 ORTHO05D000002 1.8e-06 57.8 82 34.1
HanXRQChr16g0519861 Helianthus annuus HOM05D000004 ORTHO05D000002 1.8e-06 57.8 84 33.3
Hund24008 Selenicereus undatus HOM05D015217 ORTHO05D016385 1.8e-06 57.8 50 62.0
SEGI_28128 Sequoiadendron giganteum HOM05D000190 ORTHO05D000113 1.8e-06 57.8 126 28.6
ECA236G3646 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.3e-06 57.4 80 36.2
HanXRQChr07g0190251 Helianthus annuus HOM05D000004 ORTHO05D000002 2.3e-06 57.4 84 33.3
HanXRQChr10g0295121 Helianthus annuus HOM05D000004 ORTHO05D000002 2.3e-06 57.4 84 33.3
HanXRQChr13g0415051 Helianthus annuus HOM05D000004 ORTHO05D000002 2.3e-06 57.4 84 33.3
SHI47494 Sapria himalayana HOM05D000004 ORTHO05D000563 2.3e-06 57.4 80 32.5
ECA248G0299 Erigeron canadensis HOM05D000006 ORTHO05D000091 3.0e-06 57.0 81 37.0
SHI54925 Sapria himalayana HOM05D000004 ORTHO05D000563 3.0e-06 57.0 145 26.2
SEGI_13762 Sequoiadendron giganteum HOM05D000304 ORTHO05D009660 3.0e-06 57.0 117 31.6
TWI60G1627 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.0e-06 57.0 71 35.2
ECA232G1843 Erigeron canadensis HOM05D000004 ORTHO05D000563 3.9e-06 56.6 98 29.6
Rhsim02G0208700 Rhododendron simsii HOM05D000004 ORTHO05D000563 3.9e-06 56.6 83 31.3
Rhsim05G0179000 Rhododendron simsii HOM05D011528 ORTHO05D015218 3.9e-06 56.6 83 33.7
SHI47910 Sapria himalayana HOM05D000004 ORTHO05D000002 3.9e-06 56.6 100 30.0
SHI48187 Sapria himalayana HOM05D000004 ORTHO05D000002 3.9e-06 56.6 100 30.0
SEGI_39453 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 3.9e-06 56.6 79 32.9
TWI59G0527 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.9e-06 56.6 83 33.7
ECA246G4960 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.1e-06 56.2 83 31.3
Hma1.2p1_0253F.1_g103130 Hydrangea macrophylla HOM05D000004 ORTHO05D000563 5.1e-06 56.2 72 31.9
Rhsim07G0165900 Rhododendron simsii HOM05D000004 ORTHO05D000002 6.7e-06 55.8 83 31.3
ECA236G0286 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.7e-06 55.5 83 31.3
ECA246G0447 Erigeron canadensis HOM05D000006 ORTHO05D000002 8.7e-06 55.5 159 28.9
PSO017G0752 Papaver somniferum HOM05D000004 ORTHO05D000002 8.7e-06 55.5 78 37.2
PSO063G2514 Papaver somniferum HOM05D000004 ORTHO05D000002 8.7e-06 55.5 98 31.6
SEGI_02366 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 8.7e-06 55.5 71 32.4
SEGI_38234 Sequoiadendron giganteum HOM05D009297 ORTHO05D009660 8.7e-06 55.5 150 24.0
Thecc.05G102300 Theobroma cacao HOM05D000004 ORTHO05D000563 8.7e-06 55.5 65 36.9
TPR.G29747 Trifolium pratense HOM05D000004 ORTHO05D000002 8.7e-06 55.5 82 30.5


User provided reference genes

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